RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 PLEKHH1Q9ULM0 1364 aa7.93□□□□□ -1.14
SHQ1-205ENST00000468371 CROCC2H7BZ55 1655 aa7.93□□□□□ -1.14
SHQ1-205ENST00000468371 DDB1Q16531 1140 aa7.93□□□□□ -1.14
SHQ1-205ENST00000468371 POTEAQ6S8J7 498 aa7.93□□□□□ -1.14
SHQ1-205ENST00000468371 SPATA31A3Q5VYP0 1347 aa7.93□□□□□ -1.14
SHQ1-205ENST00000468371 GCP02774 474 aa7.92□□□□□ -1.14
SHQ1-205ENST00000468371 C1orf167Q5SNV9 1468 aa7.92□□□□□ -1.14
SHQ1-205ENST00000468371 HMGB2P26583 209 aaKnown RBP7.92□□□□□ -1.14
SHQ1-205ENST00000468371 ILDR2Q71H61 639 aa7.92□□□□□ -1.14
SHQ1-205ENST00000468371 SALL2Q9Y467 1007 aaPredicted RBP7.92□□□□□ -1.14
SHQ1-205ENST00000468371 IQGAP3Q86VI3 1631 aa7.92□□□□□ -1.14
SHQ1-205ENST00000468371 APBA3O96018 575 aa7.91□□□□□ -1.14
SHQ1-205ENST00000468371 DCCP43146 1447 aa7.9□□□□□ -1.14
SHQ1-205ENST00000468371 NUDCQ9Y266 331 aa7.9□□□□□ -1.14
SHQ1-205ENST00000468371 UNC13BO14795 1591 aa7.9□□□□□ -1.14
SHQ1-205ENST00000468371 SIGLEC1Q9BZZ2 1709 aa7.9□□□□□ -1.14
SHQ1-205ENST00000468371 CGNL1Q0VF96 1302 aa7.9□□□□□ -1.14
SHQ1-205ENST00000468371 KIF1BO60333 1816 aa7.9□□□□□ -1.14
SHQ1-205ENST00000468371 B4GALNT3Q6L9W6 998 aa7.9□□□□□ -1.14
SHQ1-205ENST00000468371 GGNBP2Q9H3C7 697 aa7.9□□□□□ -1.14
SHQ1-205ENST00000468371 MRS2Q9HD23 443 aa7.9□□□□□ -1.14
SHQ1-205ENST00000468371 SYNMO15061 1565 aa7.9□□□□□ -1.15
SHQ1-205ENST00000468371 TCP11L2Q8N4U5 519 aa7.9□□□□□ -1.15
SHQ1-205ENST00000468371 U2SURPO15042 1029 aaKnown RBP7.89□□□□□ -1.15
SHQ1-205ENST00000468371 TATP17735 454 aaPredicted RBP7.89□□□□□ -1.15
SHQ1-205ENST00000468371 SOS2Q07890 1332 aaPredicted RBP7.89□□□□□ -1.15
SHQ1-205ENST00000468371 C11orf95C9JLR9 678 aaPredicted RBP7.89□□□□□ -1.15
SHQ1-205ENST00000468371 CCDC136Q96JN2 1154 aa7.89□□□□□ -1.15
SHQ1-205ENST00000468371 EIF5BO60841 1220 aaKnown RBP7.89□□□□□ -1.15
SHQ1-205ENST00000468371 FAM196AQ6ZSG2 479 aa7.89□□□□□ -1.15
SHQ1-205ENST00000468371 RTN4Q9NQC3 1192 aaKnown RBP7.89□□□□□ -1.15
SHQ1-205ENST00000468371 GCC2Q8IWJ2 1684 aa7.89□□□□□ -1.15
SHQ1-205ENST00000468371 DEPDC5O75140 1603 aa7.89□□□□□ -1.15
SHQ1-205ENST00000468371 CDCA7Q9BWT1 371 aaPredicted RBP7.88□□□□□ -1.15
SHQ1-205ENST00000468371 PPIP5K1Q6PFW1 1433 aa7.88□□□□□ -1.15
SHQ1-205ENST00000468371 TTC21AQ8NDW8 1320 aa7.88□□□□□ -1.15
SHQ1-205ENST00000468371 PTPRUQ92729 1446 aa7.88□□□□□ -1.15
SHQ1-205ENST00000468371 CCDC125Q86Z20 511 aa7.88□□□□□ -1.15
SHQ1-205ENST00000468371 ZBTB47Q9UFB7 747 aaPredicted RBP7.88□□□□□ -1.15
SHQ1-205ENST00000468371 USP47Q96K76 1375 aa7.88□□□□□ -1.15
SHQ1-205ENST00000468371 TTC21BQ7Z4L5 1316 aa7.88□□□□□ -1.15
SHQ1-205ENST00000468371 PTCH1Q13635 1447 aa7.88□□□□□ -1.15
SHQ1-205ENST00000468371 LTBP4Q8N2S1 1624 aa7.88□□□□□ -1.15
SHQ1-205ENST00000468371 UBR1Q8IWV7 1749 aa7.88□□□□□ -1.15
SHQ1-205ENST00000468371 C1orf141Q5JVX7 400 aa7.87□□□□□ -1.15
SHQ1-205ENST00000468371 E9PCH4 1651 aa7.87□□□□□ -1.15
SHQ1-205ENST00000468371 DIP2AQ14689 1571 aa7.87□□□□□ -1.15
SHQ1-205ENST00000468371 PLEKHG3A1L390 1219 aa7.87□□□□□ -1.15
SHQ1-205ENST00000468371 HSPA5P11021 654 aaKnown RBP7.87□□□□□ -1.15
SHQ1-205ENST00000468371 MROH1Q8NDA8 1641 aa7.87□□□□□ -1.15
SHQ1-205ENST00000468371 SMG6Q86US8 1419 aaKnown RBP7.87□□□□□ -1.15
SHQ1-205ENST00000468371 FAM83GA6ND36 823 aa7.87□□□□□ -1.15
SHQ1-205ENST00000468371 CC2D1BQ5T0F9 858 aaKnown RBP7.87□□□□□ -1.15
SHQ1-205ENST00000468371 NME9Q86XW9 330 aa7.87□□□□□ -1.15
SHQ1-205ENST00000468371 SPATA31E1Q6ZUB1 1445 aa7.87□□□□□ -1.15
SHQ1-205ENST00000468371 PNPLA6Q8IY17 1366 aa7.87□□□□□ -1.15
SHQ1-205ENST00000468371 KAT6BQ8WYB5 2073 aa7.87□□□□□ -1.15
SHQ1-205ENST00000468371 ALKQ9UM73 1620 aa7.86□□□□□ -1.15
SHQ1-205ENST00000468371 ZNF142P52746 1687 aaPredicted RBP7.86□□□□□ -1.15
SHQ1-205ENST00000468371 MST1RQ04912 1400 aa7.86□□□□□ -1.15
SHQ1-205ENST00000468371 POLR1AO95602 1720 aaPredicted RBP7.86□□□□□ -1.15
SHQ1-205ENST00000468371 VWDEQ8N2E2 1590 aa7.86□□□□□ -1.15
SHQ1-205ENST00000468371 STRCQ7RTU9 1775 aa7.86□□□□□ -1.15
SHQ1-205ENST00000468371 TRIM37O94972 964 aa7.86□□□□□ -1.15
SHQ1-205ENST00000468371 DEKP35659 375 aaKnown RBP7.86□□□□□ -1.15
SHQ1-205ENST00000468371 FAM182BQ5T319 152 aa7.86□□□□□ -1.15
SHQ1-205ENST00000468371 VPS72Q15906 364 aa7.86□□□□□ -1.15
SHQ1-205ENST00000468371 KIAA0232Q92628 1395 aa7.85□□□□□ -1.15
SHQ1-205ENST00000468371 SPHKAPQ2M3C7 1700 aa7.85□□□□□ -1.15
SHQ1-205ENST00000468371 CLTCL1P53675 1640 aa7.85□□□□□ -1.15
SHQ1-205ENST00000468371 PIK3C2GO75747 1445 aa7.85□□□□□ -1.15
SHQ1-205ENST00000468371 ANKRD24Q8TF21 1146 aa7.85□□□□□ -1.15
SHQ1-205ENST00000468371 STK32BQ9NY57 414 aa7.85□□□□□ -1.15
SHQ1-205ENST00000468371 ZNF330Q9Y3S2 320 aaPredicted RBP7.85□□□□□ -1.15
SHQ1-205ENST00000468371 TMEM131LA2VDJ0 1609 aa7.85□□□□□ -1.15
SHQ1-205ENST00000468371 SBNO1A3KN83 1393 aa7.84□□□□□ -1.15
SHQ1-205ENST00000468371 TNS3Q68CZ2 1445 aa7.84□□□□□ -1.15
SHQ1-205ENST00000468371 LARP1Q6PKG0 1096 aaKnown RBP7.84□□□□□ -1.15
SHQ1-205ENST00000468371 RTF1Q92541 710 aaKnown RBP7.84□□□□□ -1.15
SHQ1-205ENST00000468371 ACSBG1Q96GR2 724 aa7.84□□□□□ -1.15
SHQ1-205ENST00000468371 SPG7Q9UQ90 795 aa7.84□□□□□ -1.15
SHQ1-205ENST00000468371 IL2RBP14784 551 aa7.84□□□□□ -1.15
SHQ1-205ENST00000468371 PANK3Q9H999 370 aa7.84□□□□□ -1.15
SHQ1-205ENST00000468371 NEURL4Q96JN8 1562 aa7.84□□□□□ -1.15
SHQ1-205ENST00000468371 ANKARQ7Z5J8 1434 aa7.83□□□□□ -1.16
SHQ1-205ENST00000468371 RRS1Q15050 365 aaKnown RBP7.83□□□□□ -1.16
SHQ1-205ENST00000468371 FNBP4Q8N3X1 1017 aaPredicted RBP7.83□□□□□ -1.16
SHQ1-205ENST00000468371 PPP4R2Q9NY27 417 aa7.82□□□□□ -1.16
SHQ1-205ENST00000468371 PRAG1Q86YV5 1406 aa7.82□□□□□ -1.16
SHQ1-205ENST00000468371 PRR36Q9H6K5 1346 aa7.82□□□□□ -1.16
SHQ1-205ENST00000468371 WDR43Q15061 677 aaKnown RBP eCLIP7.82□□□□□ -1.16
SHQ1-205ENST00000468371 POLD1P28340 1107 aa7.82□□□□□ -1.16
SHQ1-205ENST00000468371 MAPK8IP3Q9UPT6 1336 aa7.82□□□□□ -1.16
SHQ1-205ENST00000468371 PLEKHO1Q53GL0 409 aaPredicted RBP7.81□□□□□ -1.16
SHQ1-205ENST00000468371 MYOM2P54296 1465 aa7.81□□□□□ -1.16
SHQ1-205ENST00000468371 PSDA5PKW4 1024 aaPredicted RBP7.81□□□□□ -1.16
SHQ1-205ENST00000468371 EN1Q05925 392 aaPredicted RBP7.81□□□□□ -1.16
SHQ1-205ENST00000468371 DEFB132Q7Z7B7 95 aa7.81□□□□□ -1.16
SHQ1-205ENST00000468371 RBM42Q9BTD8 480 aaKnown RBP7.81□□□□□ -1.16
SHQ1-205ENST00000468371 PNNQ9H307 717 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms