RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 EP400Q96L91 3159 aa18.48■□□□□ 0.55
PTMA-211ENST00000468027 SSH2Q76I76 1423 aa18.48■□□□□ 0.55
PTMA-211ENST00000468027 BCL9LQ86UU0 1499 aa18.47■□□□□ 0.55
PTMA-211ENST00000468027 ADAMTS2O95450 1211 aa18.47■□□□□ 0.55
PTMA-211ENST00000468027 SLIT2O94813 1529 aa18.47■□□□□ 0.55
PTMA-211ENST00000468027 SOCS7O14512 581 aa18.46■□□□□ 0.55
PTMA-211ENST00000468027 ZNF772Q68DY9 489 aaPredicted RBP18.46■□□□□ 0.55
PTMA-211ENST00000468027 C8orf37Q96NL8 207 aa18.46■□□□□ 0.55
PTMA-211ENST00000468027 COL14A1Q05707 1796 aaKnown RBP18.45■□□□□ 0.54
PTMA-211ENST00000468027 USP54Q70EL1 1684 aa18.45■□□□□ 0.54
PTMA-211ENST00000468027 CABLES1Q8TDN4 633 aa18.45■□□□□ 0.54
PTMA-211ENST00000468027 CD163L1Q9NR16 1453 aa18.45■□□□□ 0.54
PTMA-211ENST00000468027 USP6P35125 1406 aa18.44■□□□□ 0.54
PTMA-211ENST00000468027 CPSF1Q10570 1443 aaKnown RBP18.44■□□□□ 0.54
PTMA-211ENST00000468027 CCER1Q8TC90 406 aaPredicted RBP18.44■□□□□ 0.54
PTMA-211ENST00000468027 CABP1Q9NZU7 370 aa18.44■□□□□ 0.54
PTMA-211ENST00000468027 BRD4O60885 1362 aaPredicted RBP18.42■□□□□ 0.54
PTMA-211ENST00000468027 ATRNO75882 1429 aa18.42■□□□□ 0.54
PTMA-211ENST00000468027 CDK12Q9NYV4 1490 aaPredicted RBP18.42■□□□□ 0.54
PTMA-211ENST00000468027 ST20-MTHFSA0A0A6YYL1 179 aa18.42■□□□□ 0.54
PTMA-211ENST00000468027 NGLY1Q96IV0 654 aa18.42■□□□□ 0.54
PTMA-211ENST00000468027 ATAD2Q6PL18 1390 aa18.42■□□□□ 0.54
PTMA-211ENST00000468027 USP47Q96K76 1375 aa18.41■□□□□ 0.54
PTMA-211ENST00000468027 MYOM1P52179 1685 aa18.41■□□□□ 0.54
PTMA-211ENST00000468027 GLI3P10071 1580 aa18.4■□□□□ 0.54
PTMA-211ENST00000468027 PUS7Q96PZ0 661 aaKnown RBP18.4■□□□□ 0.54
PTMA-211ENST00000468027 BRWD3Q6RI45 1802 aa18.39■□□□□ 0.54
PTMA-211ENST00000468027 LMO7Q8WWI1 1683 aa18.39■□□□□ 0.53
PTMA-211ENST00000468027 LMOD2Q6P5Q4 547 aa18.39■□□□□ 0.53
PTMA-211ENST00000468027 COL18A1P39060 1754 aa18.39■□□□□ 0.53
PTMA-211ENST00000468027 SLIT3O75094 1523 aa18.39■□□□□ 0.53
PTMA-211ENST00000468027 PAK3O75914 559 aaPredicted RBP18.38■□□□□ 0.53
PTMA-211ENST00000468027 QTRT2Q9H974 415 aaKnown RBP18.38■□□□□ 0.53
PTMA-211ENST00000468027 USP21Q9UK80 565 aa18.38■□□□□ 0.53
PTMA-211ENST00000468027 USP19O94966 1318 aa18.38■□□□□ 0.53
PTMA-211ENST00000468027 RGPD5Q99666 1765 aa18.37■□□□□ 0.53
PTMA-211ENST00000468027 FAM83GA6ND36 823 aa18.36■□□□□ 0.53
PTMA-211ENST00000468027 RGS12O14924 1447 aa18.34■□□□□ 0.53
PTMA-211ENST00000468027 RXRBP28702 533 aa18.34■□□□□ 0.53
PTMA-211ENST00000468027 RBM6P78332 1123 aaKnown RBP18.34■□□□□ 0.53
PTMA-211ENST00000468027 ZNF692Q9BU19 519 aaPredicted RBP18.34■□□□□ 0.53
PTMA-211ENST00000468027 NUTM2GQ5VZR2 741 aa18.33■□□□□ 0.52
PTMA-211ENST00000468027 UNC5CLQ8IV45 518 aa18.33■□□□□ 0.52
PTMA-211ENST00000468027 ABTB2Q8N961 1025 aa18.33■□□□□ 0.52
PTMA-211ENST00000468027 TRPC5Q9UL62 973 aaPredicted RBP18.33■□□□□ 0.52
PTMA-211ENST00000468027 TTC21BQ7Z4L5 1316 aa18.32■□□□□ 0.52
PTMA-211ENST00000468027 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
PTMA-211ENST00000468027 SLC12A5Q9H2X9 1139 aa18.32■□□□□ 0.52
PTMA-211ENST00000468027 LTN1O94822 1766 aa18.32■□□□□ 0.52
PTMA-211ENST00000468027 SLC24A1O60721 1099 aa18.31■□□□□ 0.52
PTMA-211ENST00000468027 A0A1W2PP64 1363 aa18.3■□□□□ 0.52
PTMA-211ENST00000468027 CPDO75976 1380 aa18.3■□□□□ 0.52
PTMA-211ENST00000468027 KTN1Q86UP2 1357 aaKnown RBP18.3■□□□□ 0.52
PTMA-211ENST00000468027 KIAA0232Q92628 1395 aa18.3■□□□□ 0.52
PTMA-211ENST00000468027 NFAT5O94916 1531 aa18.3■□□□□ 0.52
PTMA-211ENST00000468027 CAMTA1Q9Y6Y1 1673 aa18.3■□□□□ 0.52
PTMA-211ENST00000468027 NINLQ9Y2I6 1382 aa18.3■□□□□ 0.52
PTMA-211ENST00000468027 TTC21AQ8NDW8 1320 aa18.29■□□□□ 0.52
PTMA-211ENST00000468027 HAP1P54257 671 aaPredicted RBP18.29■□□□□ 0.52
PTMA-211ENST00000468027 KIF20BQ96Q89 1820 aa18.28■□□□□ 0.52
PTMA-211ENST00000468027 NLRP13Q86W25 1043 aa18.28■□□□□ 0.52
PTMA-211ENST00000468027 GJD4Q96KN9 370 aaPredicted RBP18.28■□□□□ 0.52
PTMA-211ENST00000468027 USP31Q70CQ4 1352 aa18.28■□□□□ 0.52
PTMA-211ENST00000468027 EDC4Q6P2E9 1401 aaKnown RBP18.27■□□□□ 0.52
PTMA-211ENST00000468027 GCP02774 474 aa18.27■□□□□ 0.52
PTMA-211ENST00000468027 VPS72Q15906 364 aa18.27■□□□□ 0.52
PTMA-211ENST00000468027 THSD7AQ9UPZ6 1657 aa18.26■□□□□ 0.51
PTMA-211ENST00000468027 TMF1P82094 1093 aa18.26■□□□□ 0.51
PTMA-211ENST00000468027 BTG4Q9NY30 223 aa18.26■□□□□ 0.51
PTMA-211ENST00000468027 WNK3Q9BYP7 1800 aa18.26■□□□□ 0.51
PTMA-211ENST00000468027 NLRP6P59044 892 aa18.25■□□□□ 0.51
PTMA-211ENST00000468027 ZC3H6P61129 1189 aaKnown RBP18.25■□□□□ 0.51
PTMA-211ENST00000468027 ONECUT3O60422 494 aaPredicted RBP18.24■□□□□ 0.51
PTMA-211ENST00000468027 TMC1Q8TDI8 760 aa18.24■□□□□ 0.51
PTMA-211ENST00000468027 OVOS2A0A0J9YW53 1432 aa18.23■□□□□ 0.51
PTMA-211ENST00000468027 OVOS2Q6IE36 1432 aa18.23■□□□□ 0.51
PTMA-211ENST00000468027 ANKRD36BQ8N2N9 1353 aa18.23■□□□□ 0.51
PTMA-211ENST00000468027 CHRNA2Q15822 529 aa18.23■□□□□ 0.51
PTMA-211ENST00000468027 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
PTMA-211ENST00000468027 ZRANB1Q9UGI0 708 aa18.23■□□□□ 0.51
PTMA-211ENST00000468027 ABCC6O95255 1503 aa18.22■□□□□ 0.51
PTMA-211ENST00000468027 HSPA5P11021 654 aaKnown RBP18.21■□□□□ 0.51
PTMA-211ENST00000468027 HDGFL2Q7Z4V5 671 aaPredicted RBP18.21■□□□□ 0.51
PTMA-211ENST00000468027 TERF2IPQ9NYB0 399 aa18.21■□□□□ 0.51
PTMA-211ENST00000468027 SPATA31A5Q5VU36 1347 aa18.21■□□□□ 0.51
PTMA-211ENST00000468027 SPATA31A7Q8IWB4 1347 aa18.21■□□□□ 0.51
PTMA-211ENST00000468027 COL5A2P05997 1499 aaPredicted RBP18.2■□□□□ 0.5
PTMA-211ENST00000468027 NME9Q86XW9 330 aa18.2■□□□□ 0.5
PTMA-211ENST00000468027 AATKQ6ZMQ8 1374 aa18.19■□□□□ 0.5
PTMA-211ENST00000468027 EIF4G2P78344 907 aaKnown RBP eCLIP18.19■□□□□ 0.51e-76■□□□□ 9.2
PTMA-211ENST00000468027 ARHGEF25Q86VW2 580 aa18.19■□□□□ 0.5
PTMA-211ENST00000468027 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.19■□□□□ 0.5
PTMA-211ENST00000468027 PARP4Q9UKK3 1724 aaKnown RBP18.18■□□□□ 0.5
PTMA-211ENST00000468027 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
PTMA-211ENST00000468027 CDCA8Q53HL2 280 aa18.17■□□□□ 0.5
PTMA-211ENST00000468027 UPF1Q92900 1129 aaKnown RBP eCLIP18.17■□□□□ 0.53e-10■■□□□ 11.5
PTMA-211ENST00000468027 SPATA31A1Q5TZJ5 1347 aa18.17■□□□□ 0.5
PTMA-211ENST00000468027 KCNH5Q8NCM2 988 aa18.16■□□□□ 0.5
PTMA-211ENST00000468027 AXIN2Q9Y2T1 843 aa18.16■□□□□ 0.5
PTMA-211ENST00000468027 RGPD2P0DJD1 1756 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms