RNA–Protein interactions for RNA: ENST00000466185.1

PRPF4B-204, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,297 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-204ENST00000466185 MAFBQ9Y5Q3 323 aaPredicted RBP10.1□□□□□ -0.79
PRPF4B-204ENST00000466185 EIF4G2P78344 907 aaKnown RBP eCLIP10.09□□□□□ -0.79
PRPF4B-204ENST00000466185 TBC1D9Q6ZT07 1266 aa10.09□□□□□ -0.79
PRPF4B-204ENST00000466185 USB1Q9BQ65 265 aaKnown RBP10.09□□□□□ -0.79
PRPF4B-204ENST00000466185 PRR14Q9BWN1 585 aa10.09□□□□□ -0.79
PRPF4B-204ENST00000466185 ATAD2BQ9ULI0 1458 aa10.09□□□□□ -0.79
PRPF4B-204ENST00000466185 PEG3Q9GZU2 1588 aa10.09□□□□□ -0.79
PRPF4B-204ENST00000466185 RSF1Q96T23 1441 aaPredicted RBP10.08□□□□□ -0.8
PRPF4B-204ENST00000466185 CARNS1A5YM72 827 aa10.08□□□□□ -0.8
PRPF4B-204ENST00000466185 BRD1O95696 1058 aa10.08□□□□□ -0.8
PRPF4B-204ENST00000466185 NR1H3Q13133 447 aa10.08□□□□□ -0.8
PRPF4B-204ENST00000466185 CDCA8Q53HL2 280 aa10.08□□□□□ -0.8
PRPF4B-204ENST00000466185 TMCO4Q5TGY1 634 aa10.08□□□□□ -0.8
PRPF4B-204ENST00000466185 BRICD5Q6PL45 260 aa10.08□□□□□ -0.8
PRPF4B-204ENST00000466185 SMARCA2P51531 1590 aa10.07□□□□□ -0.8
PRPF4B-204ENST00000466185 SALL2Q9Y467 1007 aaPredicted RBP10.07□□□□□ -0.8
PRPF4B-204ENST00000466185 PATL2C9JE40 543 aaKnown RBP10.06□□□□□ -0.8
PRPF4B-204ENST00000466185 ATG7O95352 703 aa10.06□□□□□ -0.8
PRPF4B-204ENST00000466185 FBXO45P0C2W1 286 aa10.06□□□□□ -0.8
PRPF4B-204ENST00000466185 KCNA1Q09470 495 aa10.06□□□□□ -0.8
PRPF4B-204ENST00000466185 ADGRD1Q6QNK2 874 aa10.06□□□□□ -0.8
PRPF4B-204ENST00000466185 FKBPLQ9UIM3 349 aa10.06□□□□□ -0.8
PRPF4B-204ENST00000466185 NCAPD3P42695 1498 aa10.05□□□□□ -0.8
PRPF4B-204ENST00000466185 ATP9BO43861 1147 aa10.05□□□□□ -0.8
PRPF4B-204ENST00000466185 F12P00748 615 aaPredicted RBP10.05□□□□□ -0.8
PRPF4B-204ENST00000466185 THAP11Q96EK4 314 aa10.05□□□□□ -0.8
PRPF4B-204ENST00000466185 ZBBXA8MT70 800 aa10.04□□□□□ -0.8
PRPF4B-204ENST00000466185 HRO43593 1189 aa10.04□□□□□ -0.8
PRPF4B-204ENST00000466185 APLP1P51693 650 aa10.04□□□□□ -0.8
PRPF4B-204ENST00000466185 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
PRPF4B-204ENST00000466185 SCUBE3Q8IX30 993 aa10.04□□□□□ -0.8
PRPF4B-204ENST00000466185 KRTAP3-3Q9BYR6 98 aa10.04□□□□□ -0.8
PRPF4B-204ENST00000466185 KRTAP3-2Q9BYR7 98 aa10.04□□□□□ -0.8
PRPF4B-204ENST00000466185 FMNL1O95466 1100 aaPredicted RBP10.03□□□□□ -0.8
PRPF4B-204ENST00000466185 JUNDP17535 347 aa10.03□□□□□ -0.8
PRPF4B-204ENST00000466185 MFAP1P55081 439 aaKnown RBP10.03□□□□□ -0.8
PRPF4B-204ENST00000466185 PPP4CP60510 307 aa10.03□□□□□ -0.8
PRPF4B-204ENST00000466185 ANKK1Q8NFD2 765 aa10.03□□□□□ -0.8
PRPF4B-204ENST00000466185 MAP10Q9P2G4 905 aa10.03□□□□□ -0.8
PRPF4B-204ENST00000466185 HMGXB3Q12766 1538 aa10.02□□□□□ -0.8
PRPF4B-204ENST00000466185 SOWAHBA6NEL2 793 aa10.02□□□□□ -0.81
PRPF4B-204ENST00000466185 TMEM88BA6NKF7 163 aa10.02□□□□□ -0.81
PRPF4B-204ENST00000466185 PIK3CDO00329 1044 aa10.02□□□□□ -0.81
PRPF4B-204ENST00000466185 RGS22Q8NE09 1264 aa10.02□□□□□ -0.81
PRPF4B-204ENST00000466185 HPS5Q9UPZ3 1129 aa10.02□□□□□ -0.81
PRPF4B-204ENST00000466185 WIZO95785 1651 aa10.02□□□□□ -0.81
PRPF4B-204ENST00000466185 PTPRNQ16849 979 aa10.01□□□□□ -0.81
PRPF4B-204ENST00000466185 KANK4Q5T7N3 995 aaPredicted RBP10.01□□□□□ -0.81
PRPF4B-204ENST00000466185 PCDHB3Q9Y5E6 796 aa10.01□□□□□ -0.81
PRPF4B-204ENST00000466185 ZC3H4Q9UPT8 1303 aaKnown RBP10.01□□□□□ -0.81
PRPF4B-204ENST00000466185 BAZ1BQ9UIG0 1483 aaKnown RBP10□□□□□ -0.81
PRPF4B-204ENST00000466185 NR1I2O75469 434 aa10□□□□□ -0.81
PRPF4B-204ENST00000466185 BCAMP50895 628 aa10□□□□□ -0.81
PRPF4B-204ENST00000466185 VRTNQ9H8Y1 702 aa10□□□□□ -0.81
PRPF4B-204ENST00000466185 GOLGA8CPA6NN73 597 aa9.99□□□□□ -0.81
PRPF4B-204ENST00000466185 NFATC2IPQ8NCF5 419 aa9.99□□□□□ -0.81
PRPF4B-204ENST00000466185 TSR3Q9UJK0 312 aaKnown RBP9.99□□□□□ -0.81
PRPF4B-204ENST00000466185 MTMR7Q9Y216 660 aa9.99□□□□□ -0.81
PRPF4B-204ENST00000466185 CTHP32929 405 aa9.97□□□□□ -0.81
PRPF4B-204ENST00000466185 USP17L3A6NCW0 530 aa9.96□□□□□ -0.82
PRPF4B-204ENST00000466185 USP17L4A6NCW7 530 aa9.96□□□□□ -0.82
PRPF4B-204ENST00000466185 SKIP12755 728 aa9.96□□□□□ -0.82
PRPF4B-204ENST00000466185 ELOAQ14241 798 aaKnown RBP9.96□□□□□ -0.82
PRPF4B-204ENST00000466185 USP17L2Q6R6M4 530 aa9.96□□□□□ -0.82
PRPF4B-204ENST00000466185 USP17L1Q7RTZ2 530 aa9.96□□□□□ -0.82
PRPF4B-204ENST00000466185 FAM174AQ8TBP5 190 aa9.96□□□□□ -0.82
PRPF4B-204ENST00000466185 STAC3Q96MF2 364 aa9.96□□□□□ -0.82
PRPF4B-204ENST00000466185 IVNS1ABPQ9Y6Y0 642 aa9.96□□□□□ -0.82
PRPF4B-204ENST00000466185 DXOO77932 396 aaKnown RBP9.95□□□□□ -0.82
PRPF4B-204ENST00000466185 CCNYL3P0C7X3 344 aa9.95□□□□□ -0.82
PRPF4B-204ENST00000466185 MSS51Q4VC12 460 aa9.95□□□□□ -0.82
PRPF4B-204ENST00000466185 PLEKHM2Q8IWE5 1019 aa9.95□□□□□ -0.82
PRPF4B-204ENST00000466185 FAM160A2Q8N612 972 aaPredicted RBP9.95□□□□□ -0.82
PRPF4B-204ENST00000466185 TOP2AP11388 1531 aaKnown RBP9.94□□□□□ -0.82
PRPF4B-204ENST00000466185 USP17L5A8MUK1 530 aa9.94□□□□□ -0.82
PRPF4B-204ENST00000466185 WNT2BQ93097 391 aa9.94□□□□□ -0.82
PRPF4B-204ENST00000466185 EVA1BQ9NVM1 165 aa9.94□□□□□ -0.82
PRPF4B-204ENST00000466185 ZMIZ1Q9ULJ6 1067 aa9.94□□□□□ -0.82
PRPF4B-204ENST00000466185 GPSM3Q9Y4H4 160 aa9.94□□□□□ -0.82
PRPF4B-204ENST00000466185 PDXDC2PQ6P474 469 aa9.93□□□□□ -0.82
PRPF4B-204ENST00000466185 STK32AQ8WU08 396 aa9.93□□□□□ -0.82
PRPF4B-204ENST00000466185 OCSTAMPQ9BR26 566 aa9.93□□□□□ -0.82
PRPF4B-204ENST00000466185 MMP16P51512 607 aa9.92□□□□□ -0.82
PRPF4B-204ENST00000466185 PTK2Q05397 1052 aa9.92□□□□□ -0.82
PRPF4B-204ENST00000466185 KCNH2Q12809 1159 aa9.92□□□□□ -0.82
PRPF4B-204ENST00000466185 TMEM164Q5U3C3 297 aa9.92□□□□□ -0.82
PRPF4B-204ENST00000466185 ANKRD13DQ6ZTN6 518 aa9.92□□□□□ -0.82
PRPF4B-204ENST00000466185 DEPDC4Q8N2C3 294 aa9.92□□□□□ -0.82
PRPF4B-204ENST00000466185 ARMC2Q8NEN0 867 aa9.92□□□□□ -0.82
PRPF4B-204ENST00000466185 SPSB2Q99619 263 aa9.92□□□□□ -0.82
PRPF4B-204ENST00000466185 NUDT12Q9BQG2 462 aa9.92□□□□□ -0.82
PRPF4B-204ENST00000466185 CEP126Q9P2H0 1117 aa9.92□□□□□ -0.82
PRPF4B-204ENST00000466185 NOVA2Q9UNW9 492 aaKnown RBP9.92□□□□□ -0.82
PRPF4B-204ENST00000466185 FOXD4L5Q5VV16 416 aaPredicted RBP9.91□□□□□ -0.82
PRPF4B-204ENST00000466185 FOXD4L4Q8WXT5 416 aaPredicted RBP9.91□□□□□ -0.82
PRPF4B-204ENST00000466185 GPKOWQ92917 476 aaPredicted RBP eCLIP9.91□□□□□ -0.82
PRPF4B-204ENST00000466185 PRDM9Q9NQV7 894 aa9.91□□□□□ -0.82
PRPF4B-204ENST00000466185 WBP1LQ9NX94 342 aa9.91□□□□□ -0.82
PRPF4B-204ENST00000466185 COPS2P61201 443 aa9.89□□□□□ -0.83
PRPF4B-204ENST00000466185 SLFNL1Q499Z3 407 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms