RNA–Protein interactions for RNA: ENST00000465224.5

CNNM3-203, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 1 (best)

Gene CNNM3, Length 2,607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-203ENST00000465224 PCDHB15Q9Y5E8 787 aa12.7□□□□□ -0.38
CNNM3-203ENST00000465224 CAMSAP1Q5T5Y3 1602 aa12.69□□□□□ -0.38
CNNM3-203ENST00000465224 ANKRD36BQ8N2N9 1353 aa12.69□□□□□ -0.38
CNNM3-203ENST00000465224 U2AF1L5P0DN76 240 aaPredicted RBP12.69□□□□□ -0.38
CNNM3-203ENST00000465224 U2AF1Q01081 240 aaKnown RBP eCLIP12.69□□□□□ -0.382e-8■□□□□ 10.9
CNNM3-203ENST00000465224 ARXQ96QS3 562 aa12.69□□□□□ -0.38
CNNM3-203ENST00000465224 NEXMIFQ5QGS0 1516 aa12.69□□□□□ -0.38
CNNM3-203ENST00000465224 CFAP53Q96M91 514 aa12.69□□□□□ -0.38
CNNM3-203ENST00000465224 USP19O94966 1318 aa12.68□□□□□ -0.38
CNNM3-203ENST00000465224 ARHGEF28Q8N1W1 1705 aaKnown RBP12.68□□□□□ -0.38
CNNM3-203ENST00000465224 USP32Q8NFA0 1604 aa12.68□□□□□ -0.38
CNNM3-203ENST00000465224 GTF2E1P29083 439 aaPredicted RBP12.68□□□□□ -0.38
CNNM3-203ENST00000465224 CCDC27Q2M243 656 aa12.67□□□□□ -0.38
CNNM3-203ENST00000465224 PIK3C2BO00750 1634 aa12.67□□□□□ -0.38
CNNM3-203ENST00000465224 PUS7Q96PZ0 661 aaKnown RBP12.67□□□□□ -0.38
CNNM3-203ENST00000465224 GGNBP2Q9H3C7 697 aa12.67□□□□□ -0.38
CNNM3-203ENST00000465224 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
CNNM3-203ENST00000465224 CLCN1P35523 988 aa12.66□□□□□ -0.38
CNNM3-203ENST00000465224 TSR2Q969E8 191 aaKnown RBP12.66□□□□□ -0.38
CNNM3-203ENST00000465224 A0A1W2PP64 1363 aa12.66□□□□□ -0.38
CNNM3-203ENST00000465224 SRPK2P78362 688 aaKnown RBP12.65□□□□□ -0.38
CNNM3-203ENST00000465224 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
CNNM3-203ENST00000465224 U2SURPO15042 1029 aaKnown RBP12.64□□□□□ -0.39
CNNM3-203ENST00000465224 PLEKHF1Q96S99 279 aa12.64□□□□□ -0.39
CNNM3-203ENST00000465224 NSD2O96028 1365 aa12.63□□□□□ -0.39
CNNM3-203ENST00000465224 POGKQ9P215 609 aa12.63□□□□□ -0.39
CNNM3-203ENST00000465224 FYB1O15117 783 aa12.63□□□□□ -0.39
CNNM3-203ENST00000465224 PRAM1Q96QH2 718 aa12.63□□□□□ -0.39
CNNM3-203ENST00000465224 MYH16Q9H6N6 1097 aa12.63□□□□□ -0.39
CNNM3-203ENST00000465224 ABCC11Q96J66 1382 aa12.62□□□□□ -0.39
CNNM3-203ENST00000465224 FBXO31Q5XUX0 539 aaPredicted RBP12.62□□□□□ -0.39
CNNM3-203ENST00000465224 DHX37Q8IY37 1157 aaKnown RBP12.62□□□□□ -0.39
CNNM3-203ENST00000465224 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
CNNM3-203ENST00000465224 PDZRN3Q9UPQ7 1066 aa12.62□□□□□ -0.39
CNNM3-203ENST00000465224 MYO5BQ9ULV0 1848 aa12.62□□□□□ -0.39
CNNM3-203ENST00000465224 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
CNNM3-203ENST00000465224 TRHP20396 242 aaPredicted RBP12.62□□□□□ -0.39
CNNM3-203ENST00000465224 PMFBP1Q8TBY8 1022 aa12.62□□□□□ -0.39
CNNM3-203ENST00000465224 IPO4Q8TEX9 1081 aaKnown RBP12.62□□□□□ -0.39
CNNM3-203ENST00000465224 ARHGAP31Q2M1Z3 1444 aa12.62□□□□□ -0.39
CNNM3-203ENST00000465224 TMPOP42166 694 aaKnown RBP12.61□□□□□ -0.39
CNNM3-203ENST00000465224 EXOSC9Q06265 439 aaKnown RBP12.61□□□□□ -0.39
CNNM3-203ENST00000465224 PDCL3Q9H2J4 239 aa12.61□□□□□ -0.39
CNNM3-203ENST00000465224 SLC52A1Q9NWF4 448 aa12.61□□□□□ -0.39
CNNM3-203ENST00000465224 ADGRB2O60241 1585 aa12.61□□□□□ -0.39
CNNM3-203ENST00000465224 PTPRMP28827 1452 aa12.6□□□□□ -0.39
CNNM3-203ENST00000465224 CD163L1Q9NR16 1453 aa12.6□□□□□ -0.39
CNNM3-203ENST00000465224 VIRMAQ69YN4 1812 aaKnown RBP12.6□□□□□ -0.39
CNNM3-203ENST00000465224 FBLN1P23142 703 aa12.6□□□□□ -0.39
CNNM3-203ENST00000465224 MVPQ14764 893 aaKnown RBP12.6□□□□□ -0.39
CNNM3-203ENST00000465224 ZFYVE9O95405 1425 aa12.6□□□□□ -0.39
CNNM3-203ENST00000465224 COL3A1P02461 1466 aaPredicted RBP12.6□□□□□ -0.39
CNNM3-203ENST00000465224 ZKSCAN2Q63HK3 967 aa12.59□□□□□ -0.39
CNNM3-203ENST00000465224 NLRP1Q9C000 1473 aa12.59□□□□□ -0.39
CNNM3-203ENST00000465224 DZIP1LQ8IYY4 767 aaKnown RBP12.58□□□□□ -0.39
CNNM3-203ENST00000465224 SSH1Q8WYL5 1049 aa12.58□□□□□ -0.39
CNNM3-203ENST00000465224 TMEM131LA2VDJ0 1609 aa12.58□□□□□ -0.4
CNNM3-203ENST00000465224 CDK19Q9BWU1 502 aa12.58□□□□□ -0.4
CNNM3-203ENST00000465224 SMC4Q9NTJ3 1288 aa12.58□□□□□ -0.4
CNNM3-203ENST00000465224 YTHDC2Q9H6S0 1430 aaKnown RBP12.58□□□□□ -0.4
CNNM3-203ENST00000465224 TRIM27P14373 513 aa12.58□□□□□ -0.4
CNNM3-203ENST00000465224 RWDD1Q9H446 243 aaPredicted RBP12.58□□□□□ -0.4
CNNM3-203ENST00000465224 CABP1Q9NZU7 370 aa12.58□□□□□ -0.4
CNNM3-203ENST00000465224 FTSJ3Q8IY81 847 aaKnown RBP12.57□□□□□ -0.4
CNNM3-203ENST00000465224 TERF2IPQ9NYB0 399 aa12.57□□□□□ -0.4
CNNM3-203ENST00000465224 RIPK4P57078 832 aa12.57□□□□□ -0.4
CNNM3-203ENST00000465224 NOB1Q9ULX3 412 aaKnown RBP12.56□□□□□ -0.4
CNNM3-203ENST00000465224 ATAD2Q6PL18 1390 aa12.56□□□□□ -0.4
CNNM3-203ENST00000465224 PREX1Q8TCU6 1659 aa12.56□□□□□ -0.4
CNNM3-203ENST00000465224 MLECQ14165 292 aa12.56□□□□□ -0.4
CNNM3-203ENST00000465224 ARHGEF40Q8TER5 1519 aa12.55□□□□□ -0.4
CNNM3-203ENST00000465224 DIAPH1O60610 1272 aaKnown RBP12.55□□□□□ -0.4
CNNM3-203ENST00000465224 XRCC6P12956 609 aaKnown RBP eCLIP12.55□□□□□ -0.41e-8■■■■■ 35.6
CNNM3-203ENST00000465224 L1TD1Q5T7N2 865 aaKnown RBP12.55□□□□□ -0.4
CNNM3-203ENST00000465224 WAPLQ7Z5K2 1190 aa12.55□□□□□ -0.4
CNNM3-203ENST00000465224 BRD2P25440 801 aaKnown RBP12.54□□□□□ -0.4
CNNM3-203ENST00000465224 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.54□□□□□ -0.4
CNNM3-203ENST00000465224 REREQ9P2R6 1566 aa12.54□□□□□ -0.4
CNNM3-203ENST00000465224 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
CNNM3-203ENST00000465224 ITPRIPQ8IWB1 547 aa12.54□□□□□ -0.4
CNNM3-203ENST00000465224 CHMP4AQ9BY43 222 aa12.54□□□□□ -0.4
CNNM3-203ENST00000465224 ATF7IPQ6VMQ6 1270 aa12.53□□□□□ -0.4
CNNM3-203ENST00000465224 HDGFL2Q7Z4V5 671 aaPredicted RBP12.53□□□□□ -0.4
CNNM3-203ENST00000465224 TMEM57Q8N5G2 664 aa12.53□□□□□ -0.4
CNNM3-203ENST00000465224 TBC1D32Q96NH3 1257 aa12.53□□□□□ -0.4
CNNM3-203ENST00000465224 PANK2Q9BZ23 570 aa12.53□□□□□ -0.4
CNNM3-203ENST00000465224 ALKQ9UM73 1620 aa12.53□□□□□ -0.4
CNNM3-203ENST00000465224 PNPLA6Q8IY17 1366 aa12.53□□□□□ -0.4
CNNM3-203ENST00000465224 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
CNNM3-203ENST00000465224 MED14O60244 1454 aa12.52□□□□□ -0.41
CNNM3-203ENST00000465224 AGLP35573 1532 aa12.52□□□□□ -0.41
CNNM3-203ENST00000465224 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
CNNM3-203ENST00000465224 CLTCQ00610 1675 aaKnown RBP12.52□□□□□ -0.41
CNNM3-203ENST00000465224 POLKQ9UBT6 870 aa12.51□□□□□ -0.41
CNNM3-203ENST00000465224 ZHX1Q9UKY1 873 aaPredicted RBP12.51□□□□□ -0.41
CNNM3-203ENST00000465224 IL16Q14005 1332 aa12.51□□□□□ -0.41
CNNM3-203ENST00000465224 ANKRD26Q9UPS8 1709 aa12.51□□□□□ -0.41
CNNM3-203ENST00000465224 PHACTR3Q96KR7 559 aa12.51□□□□□ -0.41
CNNM3-203ENST00000465224 PRKAR2BP31323 418 aa12.5□□□□□ -0.41
CNNM3-203ENST00000465224 HDAC1Q13547 482 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms