RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 COL16A1Q07092 1604 aaPredicted RBP16.15■□□□□ 0.18
SEC61A1-203ENST00000464451 CCDC61Q9Y6R9 512 aa16.15■□□□□ 0.18
SEC61A1-203ENST00000464451 RNF123Q5XPI4 1314 aa16.15■□□□□ 0.18
SEC61A1-203ENST00000464451 NGDNQ8NEJ9 315 aaKnown RBP16.14■□□□□ 0.17
SEC61A1-203ENST00000464451 NPHP3Q7Z494 1330 aa16.14■□□□□ 0.17
SEC61A1-203ENST00000464451 PLEKHG5O94827 1062 aa16.14■□□□□ 0.17
SEC61A1-203ENST00000464451 PSME1Q06323 249 aa16.14■□□□□ 0.17
SEC61A1-203ENST00000464451 KRT28Q7Z3Y7 464 aa16.14■□□□□ 0.17
SEC61A1-203ENST00000464451 CABP1Q9NZU7 370 aa16.14■□□□□ 0.17
SEC61A1-203ENST00000464451 KNSTRNQ9Y448 316 aa16.14■□□□□ 0.17
SEC61A1-203ENST00000464451 SBNO2Q9Y2G9 1366 aa16.14■□□□□ 0.17
SEC61A1-203ENST00000464451 PPIP5K1Q6PFW1 1433 aa16.13■□□□□ 0.17
SEC61A1-203ENST00000464451 KIF1AQ12756 1690 aa16.12■□□□□ 0.17
SEC61A1-203ENST00000464451 SOS2Q07890 1332 aaPredicted RBP16.12■□□□□ 0.17
SEC61A1-203ENST00000464451 MYT1Q01538 1121 aa16.12■□□□□ 0.17
SEC61A1-203ENST00000464451 ACEP12821 1306 aa16.12■□□□□ 0.17
SEC61A1-203ENST00000464451 PXDNQ92626 1479 aa16.11■□□□□ 0.17
SEC61A1-203ENST00000464451 PDE3BQ13370 1112 aa16.11■□□□□ 0.17
SEC61A1-203ENST00000464451 LRRC59Q96AG4 307 aaKnown RBP16.11■□□□□ 0.17
SEC61A1-203ENST00000464451 TOPAZ1Q8N9V7 1692 aa16.1■□□□□ 0.17
SEC61A1-203ENST00000464451 LMOD2Q6P5Q4 547 aa16.1■□□□□ 0.17
SEC61A1-203ENST00000464451 ITSN1Q15811 1721 aa16.1■□□□□ 0.17
SEC61A1-203ENST00000464451 PLEKHG3A1L390 1219 aa16.09■□□□□ 0.17
SEC61A1-203ENST00000464451 PAK3O75914 559 aaPredicted RBP16.09■□□□□ 0.17
SEC61A1-203ENST00000464451 AMER1Q5JTC6 1135 aaPredicted RBP16.09■□□□□ 0.17
SEC61A1-203ENST00000464451 JCADQ9P266 1359 aa16.09■□□□□ 0.17
SEC61A1-203ENST00000464451 NPC1L1Q9UHC9 1359 aa16.09■□□□□ 0.17
SEC61A1-203ENST00000464451 NUTM2BA6NNL0 878 aaPredicted RBP16.08■□□□□ 0.17
SEC61A1-203ENST00000464451 NUTM2EB1AL46 878 aaPredicted RBP16.08■□□□□ 0.17
SEC61A1-203ENST00000464451 NUTM2AQ8IVF1 878 aaPredicted RBP16.08■□□□□ 0.17
SEC61A1-203ENST00000464451 RBM19Q9Y4C8 960 aaKnown RBP16.08■□□□□ 0.17
SEC61A1-203ENST00000464451 BLMP54132 1417 aaPredicted RBP16.08■□□□□ 0.16
SEC61A1-203ENST00000464451 SLC12A5Q9H2X9 1139 aa16.08■□□□□ 0.16
SEC61A1-203ENST00000464451 SENP3-EIF4A1A0A087X0R7 540 aa16.07■□□□□ 0.16
SEC61A1-203ENST00000464451 ATAD2Q6PL18 1390 aa16.07■□□□□ 0.16
SEC61A1-203ENST00000464451 POLR3AO14802 1390 aaPredicted RBP16.05■□□□□ 0.16
SEC61A1-203ENST00000464451 PNPLA6Q8IY17 1366 aa16.05■□□□□ 0.16
SEC61A1-203ENST00000464451 SPATA31A3Q5VYP0 1347 aa16.05■□□□□ 0.16
SEC61A1-203ENST00000464451 PPP2R1AP30153 589 aa16.05■□□□□ 0.16
SEC61A1-203ENST00000464451 NUTM2GQ5VZR2 741 aa16.05■□□□□ 0.16
SEC61A1-203ENST00000464451 B4GALNT3Q6L9W6 998 aa16.05■□□□□ 0.16
SEC61A1-203ENST00000464451 MYOM1P52179 1685 aa16.04■□□□□ 0.16
SEC61A1-203ENST00000464451 CABLES1Q8TDN4 633 aa16.03■□□□□ 0.16
SEC61A1-203ENST00000464451 SHPRHQ149N8 1683 aa16.03■□□□□ 0.16
SEC61A1-203ENST00000464451 TNS3Q68CZ2 1445 aa16.02■□□□□ 0.16
SEC61A1-203ENST00000464451 TRPM3Q9HCF6 1732 aaPredicted RBP16.02■□□□□ 0.15
SEC61A1-203ENST00000464451 SBNO1A3KN83 1393 aa16.02■□□□□ 0.15
SEC61A1-203ENST00000464451 ADAMTS2O95450 1211 aa16.01■□□□□ 0.15
SEC61A1-203ENST00000464451 PUS7Q96PZ0 661 aaKnown RBP16.01■□□□□ 0.15
SEC61A1-203ENST00000464451 SALL2Q9Y467 1007 aaPredicted RBP16.01■□□□□ 0.15
SEC61A1-203ENST00000464451 LRP6O75581 1613 aa16.01■□□□□ 0.15
SEC61A1-203ENST00000464451 SPATA31A6Q5VVP1 1343 aa16.01■□□□□ 0.15
SEC61A1-203ENST00000464451 USP6P35125 1406 aa16■□□□□ 0.15
SEC61A1-203ENST00000464451 RCAN3Q9UKA8 241 aa16■□□□□ 0.15
SEC61A1-203ENST00000464451 CD163L1Q9NR16 1453 aa16■□□□□ 0.15
SEC61A1-203ENST00000464451 WDR43Q15061 677 aaKnown RBP eCLIP15.99■□□□□ 0.15
SEC61A1-203ENST00000464451 MEX3CQ5U5Q3 659 aaKnown RBP15.99■□□□□ 0.15
SEC61A1-203ENST00000464451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.99■□□□□ 0.15
SEC61A1-203ENST00000464451 ABTB2Q8N961 1025 aa15.99■□□□□ 0.15
SEC61A1-203ENST00000464451 ADAMTS8Q9UP79 889 aa15.99■□□□□ 0.15
SEC61A1-203ENST00000464451 MED1Q15648 1581 aaPredicted RBP15.99■□□□□ 0.15
SEC61A1-203ENST00000464451 CPSF1Q10570 1443 aaKnown RBP15.99■□□□□ 0.15
SEC61A1-203ENST00000464451 RRP1P56182 461 aaKnown RBP15.99■□□□□ 0.15
SEC61A1-203ENST00000464451 HDGFL2Q7Z4V5 671 aaPredicted RBP15.99■□□□□ 0.15
SEC61A1-203ENST00000464451 A0A1W2PP64 1363 aa15.98■□□□□ 0.15
SEC61A1-203ENST00000464451 HAP1P54257 671 aaPredicted RBP15.98■□□□□ 0.15
SEC61A1-203ENST00000464451 ZNF692Q9BU19 519 aaPredicted RBP15.98■□□□□ 0.15
SEC61A1-203ENST00000464451 TERF2IPQ9NYB0 399 aa15.98■□□□□ 0.15
SEC61A1-203ENST00000464451 ARHGEF10O15013 1369 aa15.97■□□□□ 0.15
SEC61A1-203ENST00000464451 ALS2Q96Q42 1657 aa15.97■□□□□ 0.15
SEC61A1-203ENST00000464451 AKAP12Q02952 1782 aa15.97■□□□□ 0.15
SEC61A1-203ENST00000464451 CCDC136Q96JN2 1154 aa15.97■□□□□ 0.15
SEC61A1-203ENST00000464451 TTC21BQ7Z4L5 1316 aa15.96■□□□□ 0.15
SEC61A1-203ENST00000464451 COL22A1Q8NFW1 1626 aaPredicted RBP15.96■□□□□ 0.15
SEC61A1-203ENST00000464451 CDCA7LQ96GN5 454 aa15.95■□□□□ 0.14
SEC61A1-203ENST00000464451 ZRANB1Q9UGI0 708 aa15.95■□□□□ 0.14
SEC61A1-203ENST00000464451 SSH2Q76I76 1423 aa15.95■□□□□ 0.14
SEC61A1-203ENST00000464451 C8orf37Q96NL8 207 aa15.95■□□□□ 0.14
SEC61A1-203ENST00000464451 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
SEC61A1-203ENST00000464451 CARD14Q9BXL6 1004 aa15.95■□□□□ 0.14
SEC61A1-203ENST00000464451 NINLQ9Y2I6 1382 aa15.94■□□□□ 0.14
SEC61A1-203ENST00000464451 NLRP6P59044 892 aa15.94■□□□□ 0.14
SEC61A1-203ENST00000464451 NME9Q86XW9 330 aa15.94■□□□□ 0.14
SEC61A1-203ENST00000464451 MON2Q7Z3U7 1717 aa15.93■□□□□ 0.14
SEC61A1-203ENST00000464451 ANKRD36BQ8N2N9 1353 aa15.93■□□□□ 0.14
SEC61A1-203ENST00000464451 SOX12O15370 315 aa15.93■□□□□ 0.14
SEC61A1-203ENST00000464451 NRKQ7Z2Y5 1582 aa15.92■□□□□ 0.14
SEC61A1-203ENST00000464451 NGLY1Q96IV0 654 aa15.91■□□□□ 0.14
SEC61A1-203ENST00000464451 PIK3C2AO00443 1686 aa15.91■□□□□ 0.14
SEC61A1-203ENST00000464451 ZC3H6P61129 1189 aaKnown RBP15.91■□□□□ 0.14
SEC61A1-203ENST00000464451 EDC4Q6P2E9 1401 aaKnown RBP15.9■□□□□ 0.14
SEC61A1-203ENST00000464451 FANCIQ9NVI1 1328 aa15.9■□□□□ 0.14
SEC61A1-203ENST00000464451 ABCA3Q99758 1704 aa15.9■□□□□ 0.14
SEC61A1-203ENST00000464451 TTC21AQ8NDW8 1320 aa15.89■□□□□ 0.13
SEC61A1-203ENST00000464451 ZBTB7CA1YPR0 619 aa15.89■□□□□ 0.13
SEC61A1-203ENST00000464451 RGS17Q9UGC6 210 aaPredicted RBP15.89■□□□□ 0.13
SEC61A1-203ENST00000464451 AFF2P51816 1311 aa15.88■□□□□ 0.13
SEC61A1-203ENST00000464451 ZNF521Q96K83 1311 aa15.88■□□□□ 0.13
SEC61A1-203ENST00000464451 NSD3Q9BZ95 1437 aa15.87■□□□□ 0.13
SEC61A1-203ENST00000464451 CRYBG1Q9Y4K1 1723 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms