RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 NPC1L1Q9UHC9 1359 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 PCDHB15Q9Y5E8 787 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 TDRD9Q8NDG6 1382 aaKnown RBP4.76□□□□□ -1.65
CCNL1-204ENST00000464316 GOLGA6L6A8MZA4 724 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 ZNF771Q7L3S4 317 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-204ENST00000464316 BBXQ8WY36 941 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-204ENST00000464316 SMC4Q9NTJ3 1288 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 CLEC17AQ6ZS10 378 aa4.75□□□□□ -1.65
CCNL1-204ENST00000464316 TESK2Q96S53 571 aa4.75□□□□□ -1.65
CCNL1-204ENST00000464316 CAMSAP1Q5T5Y3 1602 aa4.75□□□□□ -1.65
CCNL1-204ENST00000464316 MORC1Q86VD1 984 aa4.75□□□□□ -1.65
CCNL1-204ENST00000464316 MYRIPQ8NFW9 859 aa4.75□□□□□ -1.65
CCNL1-204ENST00000464316 FOXD4L1Q9NU39 408 aa4.75□□□□□ -1.65
CCNL1-204ENST00000464316 COL17A1Q9UMD9 1497 aaPredicted RBP4.75□□□□□ -1.65
CCNL1-204ENST00000464316 KDM6BO15054 1643 aa4.75□□□□□ -1.65
CCNL1-204ENST00000464316 ZSCAN23Q3MJ62 389 aa4.75□□□□□ -1.65
CCNL1-204ENST00000464316 NCBP3Q53F19 620 aaKnown RBP4.75□□□□□ -1.65
CCNL1-204ENST00000464316 BMP2KLQ5H9B9 411 aa4.75□□□□□ -1.65
CCNL1-204ENST00000464316 AMER1Q5JTC6 1135 aaPredicted RBP4.75□□□□□ -1.65
CCNL1-204ENST00000464316 GCC1Q96CN9 775 aa4.75□□□□□ -1.65
CCNL1-204ENST00000464316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.75□□□□□ -1.657e-8■■■□□ 15.2
CCNL1-204ENST00000464316 CEP152O94986 1710 aa4.75□□□□□ -1.65
CCNL1-204ENST00000464316 DNMT1P26358 1616 aaKnown RBP4.74□□□□□ -1.65
CCNL1-204ENST00000464316 UVSSAQ2YD98 709 aa4.74□□□□□ -1.65
CCNL1-204ENST00000464316 PPP4R3BQ5MIZ7 849 aa4.74□□□□□ -1.65
CCNL1-204ENST00000464316 FEZ1Q99689 392 aa4.74□□□□□ -1.65
CCNL1-204ENST00000464316 TSPY26PQ9H489 355 aa4.74□□□□□ -1.65
CCNL1-204ENST00000464316 PRDM10Q9NQV6 1147 aa4.74□□□□□ -1.65
CCNL1-204ENST00000464316 PRPF40AO75400 957 aaKnown RBP4.74□□□□□ -1.65
CCNL1-204ENST00000464316 CDC45O75419 566 aa4.74□□□□□ -1.65
CCNL1-204ENST00000464316 SSFA2P28290 1259 aa4.74□□□□□ -1.65
CCNL1-204ENST00000464316 LRSAM1Q6UWE0 723 aa4.74□□□□□ -1.65
CCNL1-204ENST00000464316 PDLIM2Q96JY6 352 aa4.74□□□□□ -1.65
CCNL1-204ENST00000464316 PRAG1Q86YV5 1406 aa4.74□□□□□ -1.65
CCNL1-204ENST00000464316 ZNF518AQ6AHZ1 1483 aa4.74□□□□□ -1.65
CCNL1-204ENST00000464316 TROQ12816 1431 aaPredicted RBP4.74□□□□□ -1.65
CCNL1-204ENST00000464316 DISP3Q9P2K9 1392 aa4.74□□□□□ -1.65
CCNL1-204ENST00000464316 ADGRL2O95490 1459 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 MCM2P49736 904 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 CBX1P83916 185 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 CHD1LQ86WJ1 897 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 TCP11L2Q8N4U5 519 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 ZNF692Q9BU19 519 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-204ENST00000464316 BCL2L13Q9BXK5 485 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 CCDC27Q2M243 656 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 ANKRD45Q5TZF3 282 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 LNPKQ9C0E8 428 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 TSPYL1Q9H0U9 437 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 REC8O95072 547 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 MCCP23508 829 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 ATF7IPQ6VMQ6 1270 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 SPINK5Q9NQ38 1064 aaPredicted RBP4.73□□□□□ -1.65
CCNL1-204ENST00000464316 ERCC6Q03468 1493 aa4.73□□□□□ -1.65
CCNL1-204ENST00000464316 DDIT3P35638 169 aa4.72□□□□□ -1.65
CCNL1-204ENST00000464316 PRIM1P49642 420 aaKnown RBP4.72□□□□□ -1.65
CCNL1-204ENST00000464316 RBSNQ9H1K0 784 aa4.72□□□□□ -1.65
CCNL1-204ENST00000464316 NOLC1Q14978 699 aaKnown RBP eCLIP4.72□□□□□ -1.656e-7■■■■□ 22.4
CCNL1-204ENST00000464316 INTS3Q68E01 1043 aaKnown RBP4.72□□□□□ -1.65
CCNL1-204ENST00000464316 ZNF428Q96B54 188 aa4.72□□□□□ -1.65
CCNL1-204ENST00000464316 KIDINS220Q9ULH0 1771 aa4.72□□□□□ -1.65
CCNL1-204ENST00000464316 C9orf84Q5VXU9 1444 aa4.72□□□□□ -1.65
CCNL1-204ENST00000464316 NCOA3Q9Y6Q9 1424 aa4.72□□□□□ -1.65
CCNL1-204ENST00000464316 CDK13Q14004 1512 aaKnown RBP4.72□□□□□ -1.65
CCNL1-204ENST00000464316 ASXL1Q8IXJ9 1541 aa4.72□□□□□ -1.65
CCNL1-204ENST00000464316 NUCB1Q02818 461 aa4.72□□□□□ -1.65
CCNL1-204ENST00000464316 NLRP1Q9C000 1473 aa4.71□□□□□ -1.65
CCNL1-204ENST00000464316 POLR3AO14802 1390 aaPredicted RBP4.71□□□□□ -1.65
CCNL1-204ENST00000464316 U2AF1L5P0DN76 240 aaPredicted RBP4.71□□□□□ -1.65
CCNL1-204ENST00000464316 ZSCAN20P17040 1043 aaPredicted RBP4.71□□□□□ -1.65
CCNL1-204ENST00000464316 U2AF1Q01081 240 aaKnown RBP eCLIP4.71□□□□□ -1.651e-18■■■■□ 26.7
CCNL1-204ENST00000464316 GABPB1Q06547 395 aaPredicted RBP4.71□□□□□ -1.65
CCNL1-204ENST00000464316 KLHL34Q8N239 644 aa4.71□□□□□ -1.65
CCNL1-204ENST00000464316 RNF214Q8ND24 703 aa4.71□□□□□ -1.65
CCNL1-204ENST00000464316 PIBF1Q8WXW3 757 aa4.71□□□□□ -1.65
CCNL1-204ENST00000464316 RRP7AQ9Y3A4 280 aaKnown RBP4.71□□□□□ -1.65
CCNL1-204ENST00000464316 MADDQ8WXG6 1647 aa4.71□□□□□ -1.65
CCNL1-204ENST00000464316 SYCE3A1L190 88 aa4.71□□□□□ -1.66
CCNL1-204ENST00000464316 RLBP1P12271 317 aa4.71□□□□□ -1.66
CCNL1-204ENST00000464316 PLCB2Q00722 1185 aa4.71□□□□□ -1.66
CCNL1-204ENST00000464316 LMBRD1Q9NUN5 540 aa4.71□□□□□ -1.66
CCNL1-204ENST00000464316 OGFRQ9NZT2 677 aa4.71□□□□□ -1.66
CCNL1-204ENST00000464316 ATP6V1DQ9Y5K8 247 aa4.71□□□□□ -1.66
CCNL1-204ENST00000464316 HAP1P54257 671 aaPredicted RBP4.71□□□□□ -1.66
CCNL1-204ENST00000464316 FAM193AP78312 1265 aa4.71□□□□□ -1.66
CCNL1-204ENST00000464316 CREBRFQ8IUR6 639 aa4.71□□□□□ -1.66
CCNL1-204ENST00000464316 DNAJC2Q99543 621 aaKnown RBP4.71□□□□□ -1.66
CCNL1-204ENST00000464316 CALCOCO1Q9P1Z2 691 aa4.71□□□□□ -1.66
CCNL1-204ENST00000464316 PDIA4P13667 645 aaKnown RBP4.7□□□□□ -1.66
CCNL1-204ENST00000464316 GAS2L2Q8NHY3 880 aa4.7□□□□□ -1.66
CCNL1-204ENST00000464316 TTC37Q6PGP7 1564 aa4.7□□□□□ -1.66
CCNL1-204ENST00000464316 HTATSF1O43719 755 aaKnown RBP4.7□□□□□ -1.66
CCNL1-204ENST00000464316 GTF2F1P35269 517 aaKnown RBP eCLIP4.7□□□□□ -1.66
CCNL1-204ENST00000464316 TNNT3P45378 269 aaPredicted RBP4.7□□□□□ -1.66
CCNL1-204ENST00000464316 CGNQ9P2M7 1197 aaKnown RBP4.7□□□□□ -1.66
CCNL1-204ENST00000464316 NAP1L2Q9ULW6 460 aaPredicted RBP4.7□□□□□ -1.66
CCNL1-204ENST00000464316 TBC1D9Q6ZT07 1266 aa4.7□□□□□ -1.66
CCNL1-204ENST00000464316 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.7□□□□□ -1.66
CCNL1-204ENST00000464316 HNRNPMP52272 730 aaKnown RBP eCLIP4.69□□□□□ -1.66
CCNL1-204ENST00000464316 IPO4Q8TEX9 1081 aaKnown RBP4.69□□□□□ -1.66
CCNL1-204ENST00000464316 TIGD1Q96MW7 591 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms