RNA–Protein interactions for RNA: ENST00000464290.5

CRAT-208, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 867 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-208ENST00000464290 PARD3Q8TEW0 1356 aa20.78■□□□□ 0.92
CRAT-208ENST00000464290 NME9Q86XW9 330 aa20.78■□□□□ 0.92
CRAT-208ENST00000464290 XPCQ01831 940 aaPredicted RBP20.77■□□□□ 0.92
CRAT-208ENST00000464290 RALBP1Q15311 655 aa20.77■□□□□ 0.92
CRAT-208ENST00000464290 KRT28Q7Z3Y7 464 aa20.77■□□□□ 0.92
CRAT-208ENST00000464290 GGNBP2Q9H3C7 697 aa20.77■□□□□ 0.92
CRAT-208ENST00000464290 ZRANB1Q9UGI0 708 aa20.77■□□□□ 0.92
CRAT-208ENST00000464290 IQSEC2Q5JU85 1478 aa20.76■□□□□ 0.91
CRAT-208ENST00000464290 BRD4O60885 1362 aaPredicted RBP20.76■□□□□ 0.91
CRAT-208ENST00000464290 NSD2O96028 1365 aa20.76■□□□□ 0.91
CRAT-208ENST00000464290 TTC21AQ8NDW8 1320 aa20.76■□□□□ 0.91
CRAT-208ENST00000464290 NPHP3Q7Z494 1330 aa20.75■□□□□ 0.91
CRAT-208ENST00000464290 KIF20BQ96Q89 1820 aa20.74■□□□□ 0.91
CRAT-208ENST00000464290 TOM1O60784 492 aa20.74■□□□□ 0.91
CRAT-208ENST00000464290 PAK3O75914 559 aaPredicted RBP20.73■□□□□ 0.91
CRAT-208ENST00000464290 MORC1Q86VD1 984 aa20.73■□□□□ 0.91
CRAT-208ENST00000464290 PXDNQ92626 1479 aa20.72■□□□□ 0.91
CRAT-208ENST00000464290 TRPM3Q9HCF6 1732 aaPredicted RBP20.71■□□□□ 0.91
CRAT-208ENST00000464290 UBAP1LF5GYI3 381 aa20.71■□□□□ 0.91
CRAT-208ENST00000464290 USP31Q70CQ4 1352 aa20.71■□□□□ 0.91
CRAT-208ENST00000464290 ABTB2Q8N961 1025 aa20.7■□□□□ 0.9
CRAT-208ENST00000464290 PIK3C2AO00443 1686 aa20.7■□□□□ 0.9
CRAT-208ENST00000464290 ROBO1Q9Y6N7 1651 aa20.7■□□□□ 0.9
CRAT-208ENST00000464290 ANKRD26Q9UPS8 1709 aa20.7■□□□□ 0.9
CRAT-208ENST00000464290 PPP2R1AP30153 589 aa20.69■□□□□ 0.9
CRAT-208ENST00000464290 COG3Q96JB2 828 aa20.69■□□□□ 0.9
CRAT-208ENST00000464290 SOS2Q07890 1332 aaPredicted RBP20.69■□□□□ 0.9
CRAT-208ENST00000464290 MYBBP1AQ9BQG0 1328 aaKnown RBP20.69■□□□□ 0.9
CRAT-208ENST00000464290 SBNO1A3KN83 1393 aa20.69■□□□□ 0.9
CRAT-208ENST00000464290 TNNT2P45379 298 aaPredicted RBP20.68■□□□□ 0.9
CRAT-208ENST00000464290 NUTM2GQ5VZR2 741 aa20.68■□□□□ 0.9
CRAT-208ENST00000464290 OVOS2A0A0J9YW53 1432 aa20.68■□□□□ 0.9
CRAT-208ENST00000464290 OVOS2Q6IE36 1432 aa20.68■□□□□ 0.9
CRAT-208ENST00000464290 NHSL1Q5SYE7 1610 aa20.67■□□□□ 0.9
CRAT-208ENST00000464290 CCER2I3L3R5 266 aa20.67■□□□□ 0.9
CRAT-208ENST00000464290 NLRP6P59044 892 aa20.67■□□□□ 0.9
CRAT-208ENST00000464290 PIP4K2BP78356 416 aa20.67■□□□□ 0.9
CRAT-208ENST00000464290 CCDC184Q52MB2 194 aa20.66■□□□□ 0.9
CRAT-208ENST00000464290 SPATA31A3Q5VYP0 1347 aa20.65■□□□□ 0.9
CRAT-208ENST00000464290 SCAF1Q9H7N4 1312 aaKnown RBP20.64■□□□□ 0.89
CRAT-208ENST00000464290 FBLN1P23142 703 aa20.64■□□□□ 0.89
CRAT-208ENST00000464290 LMOD2Q6P5Q4 547 aa20.64■□□□□ 0.89
CRAT-208ENST00000464290 ALS2Q96Q42 1657 aa20.64■□□□□ 0.89
CRAT-208ENST00000464290 TNS3Q68CZ2 1445 aa20.63■□□□□ 0.89
CRAT-208ENST00000464290 NLRP13Q86W25 1043 aa20.63■□□□□ 0.89
CRAT-208ENST00000464290 MARF1Q9Y4F3 1742 aaKnown RBP20.63■□□□□ 0.89
CRAT-208ENST00000464290 AHDC1Q5TGY3 1603 aaPredicted RBP20.63■□□□□ 0.89
CRAT-208ENST00000464290 USP54Q70EL1 1684 aa20.62■□□□□ 0.89
CRAT-208ENST00000464290 AATKQ6ZMQ8 1374 aa20.59■□□□□ 0.89
CRAT-208ENST00000464290 MTHFSP49914 203 aa20.59■□□□□ 0.89
CRAT-208ENST00000464290 USP19O94966 1318 aa20.58■□□□□ 0.89
CRAT-208ENST00000464290 SOX12O15370 315 aa20.58■□□□□ 0.89
CRAT-208ENST00000464290 MRS2Q9HD23 443 aa20.58■□□□□ 0.89
CRAT-208ENST00000464290 POLKQ9UBT6 870 aa20.58■□□□□ 0.89
CRAT-208ENST00000464290 ARHGEF10O15013 1369 aa20.58■□□□□ 0.88
CRAT-208ENST00000464290 PLEKHG5O94827 1062 aa20.56■□□□□ 0.88
CRAT-208ENST00000464290 RRS1Q15050 365 aaKnown RBP20.56■□□□□ 0.88
CRAT-208ENST00000464290 SLIT3O75094 1523 aa20.56■□□□□ 0.88
CRAT-208ENST00000464290 MED1Q15648 1581 aaPredicted RBP20.55■□□□□ 0.88
CRAT-208ENST00000464290 MAP2P11137 1827 aaKnown RBP20.55■□□□□ 0.88
CRAT-208ENST00000464290 LRRC59Q96AG4 307 aaKnown RBP20.55■□□□□ 0.88
CRAT-208ENST00000464290 EMILIN1Q9Y6C2 1016 aa20.55■□□□□ 0.88
CRAT-208ENST00000464290 PHLPP1O60346 1717 aa20.54■□□□□ 0.88
CRAT-208ENST00000464290 GCP02774 474 aa20.54■□□□□ 0.88
CRAT-208ENST00000464290 KCNH5Q8NCM2 988 aa20.54■□□□□ 0.88
CRAT-208ENST00000464290 CABLES1Q8TDN4 633 aa20.54■□□□□ 0.88
CRAT-208ENST00000464290 NFAT5O94916 1531 aa20.53■□□□□ 0.88
CRAT-208ENST00000464290 COL16A1Q07092 1604 aaPredicted RBP20.53■□□□□ 0.88
CRAT-208ENST00000464290 SMG6Q86US8 1419 aaKnown RBP20.53■□□□□ 0.88
CRAT-208ENST00000464290 MAP3K19Q56UN5 1328 aa20.52■□□□□ 0.87
CRAT-208ENST00000464290 PPM1GO15355 546 aaPredicted RBP20.51■□□□□ 0.87
CRAT-208ENST00000464290 PNISRQ8TF01 805 aaKnown RBP20.51■□□□□ 0.87
CRAT-208ENST00000464290 PNPLA6Q8IY17 1366 aa20.5■□□□□ 0.87
CRAT-208ENST00000464290 CRYBG1Q9Y4K1 1723 aa20.5■□□□□ 0.87
CRAT-208ENST00000464290 INSRP06213 1382 aa20.49■□□□□ 0.87
CRAT-208ENST00000464290 PHRF1Q9P1Y6 1649 aaKnown RBP20.49■□□□□ 0.87
CRAT-208ENST00000464290 ARHGEF25Q86VW2 580 aa20.48■□□□□ 0.87
CRAT-208ENST00000464290 CFAP53Q96M91 514 aa20.48■□□□□ 0.87
CRAT-208ENST00000464290 COL3A1P02461 1466 aaPredicted RBP20.48■□□□□ 0.87
CRAT-208ENST00000464290 PEAK1Q9H792 1746 aa20.47■□□□□ 0.87
CRAT-208ENST00000464290 CDK12Q9NYV4 1490 aaPredicted RBP20.46■□□□□ 0.87
CRAT-208ENST00000464290 AMPHP49418 695 aa20.46■□□□□ 0.87
CRAT-208ENST00000464290 ZC3H6P61129 1189 aaKnown RBP20.46■□□□□ 0.87
CRAT-208ENST00000464290 HSP90AB2PQ58FF8 381 aa20.45■□□□□ 0.86
CRAT-208ENST00000464290 HOXC9P31274 260 aa20.44■□□□□ 0.86
CRAT-208ENST00000464290 HSPA1LP34931 641 aa20.44■□□□□ 0.86
CRAT-208ENST00000464290 FAM9BQ8IZU0 186 aa20.44■□□□□ 0.86
CRAT-208ENST00000464290 COL22A1Q8NFW1 1626 aaPredicted RBP20.44■□□□□ 0.86
CRAT-208ENST00000464290 FLT4P35916 1363 aa20.44■□□□□ 0.86
CRAT-208ENST00000464290 KIF24Q5T7B8 1368 aa20.44■□□□□ 0.86
CRAT-208ENST00000464290 LTN1O94822 1766 aa20.44■□□□□ 0.86
CRAT-208ENST00000464290 ZBTB7CA1YPR0 619 aa20.43■□□□□ 0.86
CRAT-208ENST00000464290 IP6K1Q92551 441 aa20.43■□□□□ 0.86
CRAT-208ENST00000464290 ABCA3Q99758 1704 aa20.43■□□□□ 0.86
CRAT-208ENST00000464290 DIAPH1O60610 1272 aaKnown RBP20.42■□□□□ 0.86
CRAT-208ENST00000464290 IL13P35225 146 aa20.42■□□□□ 0.86
CRAT-208ENST00000464290 RTL1A6NKG5 1358 aa20.42■□□□□ 0.86
CRAT-208ENST00000464290 CPDO75976 1380 aa20.42■□□□□ 0.86
CRAT-208ENST00000464290 KIAA0232Q92628 1395 aa20.41■□□□□ 0.86
CRAT-208ENST00000464290 SHPRHQ149N8 1683 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms