RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 THSD7AQ9UPZ6 1657 aa25.47■■□□□ 1.67
HMGN1-209ENST00000463631 MINK1Q8N4C8 1332 aaPredicted RBP25.46■■□□□ 1.67
HMGN1-209ENST00000463631 BTG4Q9NY30 223 aa25.46■■□□□ 1.67
HMGN1-209ENST00000463631 ATP7BP35670 1465 aa25.46■■□□□ 1.67
HMGN1-209ENST00000463631 RGPD1P0DJD0 1748 aa25.45■■□□□ 1.66
HMGN1-209ENST00000463631 FAM98CQ17RN3 349 aaKnown RBP25.43■■□□□ 1.66
HMGN1-209ENST00000463631 DCAF11Q8TEB1 546 aa25.42■■□□□ 1.66
HMGN1-209ENST00000463631 SPATA31A5Q5VU36 1347 aa25.41■■□□□ 1.66
HMGN1-209ENST00000463631 SPATA31A7Q8IWB4 1347 aa25.41■■□□□ 1.66
HMGN1-209ENST00000463631 BAG6P46379 1132 aa25.41■■□□□ 1.66
HMGN1-209ENST00000463631 PHRF1Q9P1Y6 1649 aaKnown RBP25.41■■□□□ 1.66
HMGN1-209ENST00000463631 TOPAZ1Q8N9V7 1692 aa25.4■■□□□ 1.66
HMGN1-209ENST00000463631 A0A0G2JS52 829 aa25.4■■□□□ 1.66
HMGN1-209ENST00000463631 MYT1Q01538 1121 aa25.4■■□□□ 1.66
HMGN1-209ENST00000463631 NGDNQ8NEJ9 315 aaKnown RBP25.39■■□□□ 1.66
HMGN1-209ENST00000463631 TNS1Q9HBL0 1735 aaKnown RBP25.39■■□□□ 1.65
HMGN1-209ENST00000463631 DISP2A7MBM2 1401 aa25.38■■□□□ 1.65
HMGN1-209ENST00000463631 KDM2AQ9Y2K7 1162 aa25.38■■□□□ 1.65
HMGN1-209ENST00000463631 PRDM11Q9NQV5 511 aa25.37■■□□□ 1.65
HMGN1-209ENST00000463631 KIAA1210Q9ULL0 1709 aa25.35■■□□□ 1.65
HMGN1-209ENST00000463631 HRCP23327 699 aa25.34■■□□□ 1.65
HMGN1-209ENST00000463631 POLR3AO14802 1390 aaPredicted RBP25.33■■□□□ 1.65
HMGN1-209ENST00000463631 PAK3O75914 559 aaPredicted RBP25.33■■□□□ 1.65
HMGN1-209ENST00000463631 NUDT16Q96DE0 195 aaKnown RBP25.33■■□□□ 1.65
HMGN1-209ENST00000463631 KIAA0232Q92628 1395 aa25.32■■□□□ 1.64
HMGN1-209ENST00000463631 SPATA31A1Q5TZJ5 1347 aa25.31■■□□□ 1.64
HMGN1-209ENST00000463631 NRKQ7Z2Y5 1582 aa25.3■■□□□ 1.64
HMGN1-209ENST00000463631 PSDA5PKW4 1024 aaPredicted RBP25.27■■□□□ 1.64
HMGN1-209ENST00000463631 EN1Q05925 392 aaPredicted RBP25.27■■□□□ 1.64
HMGN1-209ENST00000463631 FAM182BQ5T319 152 aa25.26■■□□□ 1.63
HMGN1-209ENST00000463631 LMO7Q8WWI1 1683 aa25.26■■□□□ 1.63
HMGN1-209ENST00000463631 CDK19Q9BWU1 502 aa25.25■■□□□ 1.63
HMGN1-209ENST00000463631 CCDC61Q9Y6R9 512 aa25.25■■□□□ 1.63
HMGN1-209ENST00000463631 SSH2Q76I76 1423 aa25.24■■□□□ 1.63
HMGN1-209ENST00000463631 CPDO75976 1380 aa25.23■■□□□ 1.63
HMGN1-209ENST00000463631 PARD3Q8TEW0 1356 aa25.23■■□□□ 1.63
HMGN1-209ENST00000463631 ACEP12821 1306 aa25.23■■□□□ 1.63
HMGN1-209ENST00000463631 PLEKHG3A1L390 1219 aa25.23■■□□□ 1.63
HMGN1-209ENST00000463631 CHRNA2Q15822 529 aa25.23■■□□□ 1.63
HMGN1-209ENST00000463631 USP19O94966 1318 aa25.22■■□□□ 1.63
HMGN1-209ENST00000463631 FAM196AQ6ZSG2 479 aa25.22■■□□□ 1.63
HMGN1-209ENST00000463631 CAMTA1Q9Y6Y1 1673 aa25.21■■□□□ 1.63
HMGN1-209ENST00000463631 NBPF8Q3BBV2 869 aa25.21■■□□□ 1.63
HMGN1-209ENST00000463631 BARGINQ6ZT62 677 aa25.21■■□□□ 1.63
HMGN1-209ENST00000463631 RREB1Q92766 1687 aa25.2■■□□□ 1.63
HMGN1-209ENST00000463631 ZC3H6P61129 1189 aaKnown RBP25.2■■□□□ 1.62
HMGN1-209ENST00000463631 STRN4Q9NRL3 753 aa25.2■■□□□ 1.62
HMGN1-209ENST00000463631 CAMKK2Q96RR4 588 aa25.18■■□□□ 1.62
HMGN1-209ENST00000463631 R3HDM1Q15032 1099 aaKnown RBP25.17■■□□□ 1.62
HMGN1-209ENST00000463631 NUTM2GQ5VZR2 741 aa25.17■■□□□ 1.62
HMGN1-209ENST00000463631 BRD4O60885 1362 aaPredicted RBP25.17■■□□□ 1.62
HMGN1-209ENST00000463631 EZH2Q15910 746 aaKnown RBP25.16■■□□□ 1.62
HMGN1-209ENST00000463631 PARP4Q9UKK3 1724 aaKnown RBP25.16■■□□□ 1.62
HMGN1-209ENST00000463631 PPIP5K1Q6PFW1 1433 aa25.15■■□□□ 1.62
HMGN1-209ENST00000463631 TRIM37O94972 964 aa25.15■■□□□ 1.62
HMGN1-209ENST00000463631 ABTB2Q8N961 1025 aa25.15■■□□□ 1.62
HMGN1-209ENST00000463631 NUP188Q5SRE5 1749 aa25.15■■□□□ 1.62
HMGN1-209ENST00000463631 QRICH2Q9H0J4 1663 aa25.13■■□□□ 1.61
HMGN1-209ENST00000463631 COL5A2P05997 1499 aaPredicted RBP25.13■■□□□ 1.61
HMGN1-209ENST00000463631 EVA1CP58658 441 aa25.12■■□□□ 1.61
HMGN1-209ENST00000463631 TCP11L2Q8N4U5 519 aa25.12■■□□□ 1.61
HMGN1-209ENST00000463631 USP35Q9P2H5 1018 aa25.12■■□□□ 1.61
HMGN1-209ENST00000463631 NBPF1Q3BBV0 1214 aa25.11■■□□□ 1.61
HMGN1-209ENST00000463631 LARP1Q6PKG0 1096 aaKnown RBP25.11■■□□□ 1.61
HMGN1-209ENST00000463631 THRAP3Q9Y2W1 955 aaKnown RBP25.11■■□□□ 1.61
HMGN1-209ENST00000463631 CENPJQ9HC77 1338 aaPredicted RBP25.11■■□□□ 1.61
HMGN1-209ENST00000463631 PDE3BQ13370 1112 aa25.1■■□□□ 1.61
HMGN1-209ENST00000463631 NLRP13Q86W25 1043 aa25.1■■□□□ 1.61
HMGN1-209ENST00000463631 SLIT3O75094 1523 aa25.1■■□□□ 1.61
HMGN1-209ENST00000463631 APBA3O96018 575 aa25.09■■□□□ 1.61
HMGN1-209ENST00000463631 GCP02774 474 aa25.08■■□□□ 1.61
HMGN1-209ENST00000463631 SRPK2P78362 688 aaKnown RBP25.08■■□□□ 1.61
HMGN1-209ENST00000463631 USP6P35125 1406 aa25.08■■□□□ 1.61
HMGN1-209ENST00000463631 PEAK1Q9H792 1746 aa25.08■■□□□ 1.61
HMGN1-209ENST00000463631 CRB1P82279 1406 aa25.07■■□□□ 1.6
HMGN1-209ENST00000463631 RGPD3A6NKT7 1758 aaPredicted RBP25.07■■□□□ 1.6
HMGN1-209ENST00000463631 RGPD4Q7Z3J3 1758 aa25.07■■□□□ 1.6
HMGN1-209ENST00000463631 C11orf95C9JLR9 678 aaPredicted RBP25.05■■□□□ 1.6
HMGN1-209ENST00000463631 LRRC37A3O60309 1634 aa25.04■■□□□ 1.6
HMGN1-209ENST00000463631 PIK3C2AO00443 1686 aa25.04■■□□□ 1.6
HMGN1-209ENST00000463631 AATKQ6ZMQ8 1374 aa25.04■■□□□ 1.6
HMGN1-209ENST00000463631 CABP2Q9NPB3 220 aa25.03■■□□□ 1.6
HMGN1-209ENST00000463631 OVOS2A0A0G2JMS6 1433 aa25.03■■□□□ 1.6
HMGN1-209ENST00000463631 OVOS2A0A0J9YW53 1432 aa25.03■■□□□ 1.6
HMGN1-209ENST00000463631 OVOS2Q6IE36 1432 aa25.03■■□□□ 1.6
HMGN1-209ENST00000463631 WNK3Q9BYP7 1800 aa25.02■■□□□ 1.6
HMGN1-209ENST00000463631 COL18A1P39060 1754 aa25.02■■□□□ 1.6
HMGN1-209ENST00000463631 SBF2Q86WG5 1849 aa25■■□□□ 1.59
HMGN1-209ENST00000463631 TRPM1Q7Z4N2 1603 aa24.99■■□□□ 1.59
HMGN1-209ENST00000463631 NBPF14Q5TI25 921 aa24.98■■□□□ 1.59
HMGN1-209ENST00000463631 CABP1Q9NZU7 370 aa24.98■■□□□ 1.59
HMGN1-209ENST00000463631 NLRP6P59044 892 aa24.97■■□□□ 1.59
HMGN1-209ENST00000463631 AKAP12Q02952 1782 aa24.96■■□□□ 1.59
HMGN1-209ENST00000463631 CPSF1Q10570 1443 aaKnown RBP24.95■■□□□ 1.59
HMGN1-209ENST00000463631 BCL9O00512 1426 aa24.94■■□□□ 1.58
HMGN1-209ENST00000463631 EVC2Q86UK5 1308 aa24.93■■□□□ 1.58
HMGN1-209ENST00000463631 WDR17Q8IZU2 1322 aa24.92■■□□□ 1.58
HMGN1-209ENST00000463631 ABCC6O95255 1503 aa24.91■■□□□ 1.58
HMGN1-209ENST00000463631 DDB1Q16531 1140 aa24.91■■□□□ 1.58
HMGN1-209ENST00000463631 PLSCR1O15162 318 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms