RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 POLR3AO14802 1390 aaPredicted RBP13.43□□□□□ -0.26
PTPRD-207ENST00000463477 ST20-MTHFSA0A0A6YYL1 179 aa13.42□□□□□ -0.26
PTPRD-207ENST00000463477 FKBP8Q14318 412 aa13.42□□□□□ -0.26
PTPRD-207ENST00000463477 PUS7Q96PZ0 661 aaKnown RBP13.42□□□□□ -0.26
PTPRD-207ENST00000463477 CABP1Q9NZU7 370 aa13.42□□□□□ -0.26
PTPRD-207ENST00000463477 QRICH2Q9H0J4 1663 aa13.42□□□□□ -0.26
PTPRD-207ENST00000463477 CCDC184Q52MB2 194 aa13.41□□□□□ -0.26
PTPRD-207ENST00000463477 ILDR2Q71H61 639 aa13.41□□□□□ -0.26
PTPRD-207ENST00000463477 TESK2Q96S53 571 aa13.41□□□□□ -0.26
PTPRD-207ENST00000463477 TNS3Q68CZ2 1445 aa13.41□□□□□ -0.26
PTPRD-207ENST00000463477 ERICH6BQ5W0A0 696 aa13.4□□□□□ -0.26
PTPRD-207ENST00000463477 ARHGEF10O15013 1369 aa13.4□□□□□ -0.26
PTPRD-207ENST00000463477 ZNF772Q68DY9 489 aaPredicted RBP13.4□□□□□ -0.26
PTPRD-207ENST00000463477 PPIP5K1Q6PFW1 1433 aa13.4□□□□□ -0.26
PTPRD-207ENST00000463477 COL22A1Q8NFW1 1626 aaPredicted RBP13.39□□□□□ -0.27
PTPRD-207ENST00000463477 ADAMTS2O95450 1211 aa13.39□□□□□ -0.27
PTPRD-207ENST00000463477 LMOD2Q6P5Q4 547 aa13.39□□□□□ -0.27
PTPRD-207ENST00000463477 ITSN1Q15811 1721 aa13.38□□□□□ -0.27
PTPRD-207ENST00000463477 ATAD2Q6PL18 1390 aa13.38□□□□□ -0.27
PTPRD-207ENST00000463477 PAK3O75914 559 aaPredicted RBP13.38□□□□□ -0.27
PTPRD-207ENST00000463477 POTEAQ6S8J7 498 aa13.38□□□□□ -0.27
PTPRD-207ENST00000463477 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
PTPRD-207ENST00000463477 BRD4O60885 1362 aaPredicted RBP13.38□□□□□ -0.27
PTPRD-207ENST00000463477 NGLY1Q96IV0 654 aa13.37□□□□□ -0.27
PTPRD-207ENST00000463477 C8orf37Q96NL8 207 aa13.37□□□□□ -0.27
PTPRD-207ENST00000463477 TOPAZ1Q8N9V7 1692 aa13.37□□□□□ -0.27
PTPRD-207ENST00000463477 RALBP1Q15311 655 aa13.37□□□□□ -0.27
PTPRD-207ENST00000463477 FNBP4Q8N3X1 1017 aaPredicted RBP13.37□□□□□ -0.27
PTPRD-207ENST00000463477 AFF2P51816 1311 aa13.36□□□□□ -0.27
PTPRD-207ENST00000463477 CABLES1Q8TDN4 633 aa13.36□□□□□ -0.27
PTPRD-207ENST00000463477 TRPM3Q9HCF6 1732 aaPredicted RBP13.35□□□□□ -0.27
PTPRD-207ENST00000463477 HAP1P54257 671 aaPredicted RBP13.34□□□□□ -0.27
PTPRD-207ENST00000463477 TMF1P82094 1093 aa13.34□□□□□ -0.27
PTPRD-207ENST00000463477 FAM9BQ8IZU0 186 aa13.34□□□□□ -0.27
PTPRD-207ENST00000463477 ABTB2Q8N961 1025 aa13.34□□□□□ -0.27
PTPRD-207ENST00000463477 USP6P35125 1406 aa13.33□□□□□ -0.28
PTPRD-207ENST00000463477 CPSF1Q10570 1443 aaKnown RBP13.33□□□□□ -0.28
PTPRD-207ENST00000463477 SLC12A5Q9H2X9 1139 aa13.33□□□□□ -0.28
PTPRD-207ENST00000463477 QTRT2Q9H974 415 aaKnown RBP13.33□□□□□ -0.28
PTPRD-207ENST00000463477 MYBBP1AQ9BQG0 1328 aaKnown RBP13.32□□□□□ -0.28
PTPRD-207ENST00000463477 SSH2Q76I76 1423 aa13.32□□□□□ -0.28
PTPRD-207ENST00000463477 SMG6Q86US8 1419 aaKnown RBP13.32□□□□□ -0.28
PTPRD-207ENST00000463477 NLRP13Q86W25 1043 aa13.32□□□□□ -0.28
PTPRD-207ENST00000463477 USP21Q9UK80 565 aa13.32□□□□□ -0.28
PTPRD-207ENST00000463477 ALS2Q96Q42 1657 aa13.32□□□□□ -0.28
PTPRD-207ENST00000463477 INSRP06213 1382 aa13.32□□□□□ -0.28
PTPRD-207ENST00000463477 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
PTPRD-207ENST00000463477 CDCA8Q53HL2 280 aa13.31□□□□□ -0.28
PTPRD-207ENST00000463477 TMC1Q8TDI8 760 aa13.31□□□□□ -0.28
PTPRD-207ENST00000463477 FAM83GA6ND36 823 aa13.31□□□□□ -0.28
PTPRD-207ENST00000463477 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
PTPRD-207ENST00000463477 RXRBP28702 533 aa13.31□□□□□ -0.28
PTPRD-207ENST00000463477 PNISRQ8TF01 805 aaKnown RBP13.31□□□□□ -0.28
PTPRD-207ENST00000463477 NUTM2GQ5VZR2 741 aa13.3□□□□□ -0.28
PTPRD-207ENST00000463477 TSHZ2Q9NRE2 1034 aa13.3□□□□□ -0.28
PTPRD-207ENST00000463477 TERF2IPQ9NYB0 399 aa13.3□□□□□ -0.28
PTPRD-207ENST00000463477 NINLQ9Y2I6 1382 aa13.3□□□□□ -0.28
PTPRD-207ENST00000463477 TTC21BQ7Z4L5 1316 aa13.29□□□□□ -0.28
PTPRD-207ENST00000463477 BCL9LQ86UU0 1499 aa13.29□□□□□ -0.28
PTPRD-207ENST00000463477 HDGFL2Q7Z4V5 671 aaPredicted RBP13.29□□□□□ -0.28
PTPRD-207ENST00000463477 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
PTPRD-207ENST00000463477 POLR3GLQ9BT43 218 aa13.29□□□□□ -0.28
PTPRD-207ENST00000463477 TRPC5Q9UL62 973 aaPredicted RBP13.29□□□□□ -0.28
PTPRD-207ENST00000463477 TTC21AQ8NDW8 1320 aa13.29□□□□□ -0.28
PTPRD-207ENST00000463477 SOCS7O14512 581 aa13.28□□□□□ -0.28
PTPRD-207ENST00000463477 PER1O15534 1290 aaPredicted RBP13.28□□□□□ -0.28
PTPRD-207ENST00000463477 NLRP6P59044 892 aa13.28□□□□□ -0.28
PTPRD-207ENST00000463477 RBM6P78332 1123 aaKnown RBP13.28□□□□□ -0.28
PTPRD-207ENST00000463477 SLIT2O94813 1529 aa13.28□□□□□ -0.28
PTPRD-207ENST00000463477 USP19O94966 1318 aa13.28□□□□□ -0.28
PTPRD-207ENST00000463477 CD163L1Q9NR16 1453 aa13.28□□□□□ -0.28
PTPRD-207ENST00000463477 GCP02774 474 aa13.28□□□□□ -0.28
PTPRD-207ENST00000463477 MARF1Q9Y4F3 1742 aaKnown RBP13.26□□□□□ -0.29
PTPRD-207ENST00000463477 ZC3H6P61129 1189 aaKnown RBP13.25□□□□□ -0.29
PTPRD-207ENST00000463477 PRDM11Q9NQV5 511 aa13.25□□□□□ -0.29
PTPRD-207ENST00000463477 MYOM1P52179 1685 aa13.25□□□□□ -0.29
PTPRD-207ENST00000463477 ATRNO75882 1429 aa13.25□□□□□ -0.29
PTPRD-207ENST00000463477 GJD4Q96KN9 370 aaPredicted RBP13.24□□□□□ -0.29
PTPRD-207ENST00000463477 BTG4Q9NY30 223 aa13.24□□□□□ -0.29
PTPRD-207ENST00000463477 RNF123Q5XPI4 1314 aa13.24□□□□□ -0.29
PTPRD-207ENST00000463477 A0A1W2PP64 1363 aa13.24□□□□□ -0.29
PTPRD-207ENST00000463477 AKAP12Q02952 1782 aa13.24□□□□□ -0.29
PTPRD-207ENST00000463477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.29
PTPRD-207ENST00000463477 KCNH5Q8NCM2 988 aa13.24□□□□□ -0.29
PTPRD-207ENST00000463477 NUDCQ9Y266 331 aa13.24□□□□□ -0.29
PTPRD-207ENST00000463477 CPDO75976 1380 aa13.23□□□□□ -0.29
PTPRD-207ENST00000463477 KIAA0232Q92628 1395 aa13.23□□□□□ -0.29
PTPRD-207ENST00000463477 EDC4Q6P2E9 1401 aaKnown RBP13.23□□□□□ -0.29
PTPRD-207ENST00000463477 ABCA3Q99758 1704 aa13.23□□□□□ -0.29
PTPRD-207ENST00000463477 VPS72Q15906 364 aa13.23□□□□□ -0.29
PTPRD-207ENST00000463477 PPP4R2Q9NY27 417 aa13.23□□□□□ -0.29
PTPRD-207ENST00000463477 USP31Q70CQ4 1352 aa13.23□□□□□ -0.29
PTPRD-207ENST00000463477 ANKRD36BQ8N2N9 1353 aa13.23□□□□□ -0.29
PTPRD-207ENST00000463477 CRYBG1Q9Y4K1 1723 aa13.23□□□□□ -0.29
PTPRD-207ENST00000463477 CDK12Q9NYV4 1490 aaPredicted RBP13.23□□□□□ -0.29
PTPRD-207ENST00000463477 CHRNA2Q15822 529 aa13.21□□□□□ -0.29
PTPRD-207ENST00000463477 NME9Q86XW9 330 aa13.21□□□□□ -0.3
PTPRD-207ENST00000463477 NPC1L1Q9UHC9 1359 aa13.21□□□□□ -0.3
PTPRD-207ENST00000463477 MON2Q7Z3U7 1717 aa13.2□□□□□ -0.3
PTPRD-207ENST00000463477 ONECUT3O60422 494 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms