RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 KRT27Q7Z3Y8 459 aa16.47■□□□□ 0.23
PTPN7-204ENST00000462815 DCAF11Q8TEB1 546 aa16.47■□□□□ 0.23
PTPN7-204ENST00000462815 BTG4Q9NY30 223 aa16.46■□□□□ 0.23
PTPN7-204ENST00000462815 GPRASP1Q5JY77 1395 aa16.46■□□□□ 0.23
PTPN7-204ENST00000462815 HRCP23327 699 aa16.45■□□□□ 0.22
PTPN7-204ENST00000462815 STAC3Q96MF2 364 aa16.45■□□□□ 0.22
PTPN7-204ENST00000462815 KDM2AQ9Y2K7 1162 aa16.45■□□□□ 0.22
PTPN7-204ENST00000462815 TNS1Q9HBL0 1735 aaKnown RBP16.45■□□□□ 0.22
PTPN7-204ENST00000462815 SPATA31A5Q5VU36 1347 aa16.45■□□□□ 0.22
PTPN7-204ENST00000462815 SPATA31A7Q8IWB4 1347 aa16.45■□□□□ 0.22
PTPN7-204ENST00000462815 FAM98CQ17RN3 349 aaKnown RBP16.44■□□□□ 0.22
PTPN7-204ENST00000462815 KIAA1210Q9ULL0 1709 aa16.44■□□□□ 0.22
PTPN7-204ENST00000462815 POLR3AO14802 1390 aaPredicted RBP16.43■□□□□ 0.22
PTPN7-204ENST00000462815 RGPD1P0DJD0 1748 aa16.43■□□□□ 0.22
PTPN7-204ENST00000462815 CCDC9Q9Y3X0 531 aaKnown RBP16.43■□□□□ 0.22
PTPN7-204ENST00000462815 DISP2A7MBM2 1401 aa16.42■□□□□ 0.22
PTPN7-204ENST00000462815 NRKQ7Z2Y5 1582 aa16.42■□□□□ 0.22
PTPN7-204ENST00000462815 LMO7Q8WWI1 1683 aa16.4■□□□□ 0.22
PTPN7-204ENST00000462815 KIAA0232Q92628 1395 aa16.4■□□□□ 0.22
PTPN7-204ENST00000462815 NUDT16Q96DE0 195 aaKnown RBP16.4■□□□□ 0.22
PTPN7-204ENST00000462815 NGDNQ8NEJ9 315 aaKnown RBP16.39■□□□□ 0.21
PTPN7-204ENST00000462815 SF3B2Q13435 895 aaKnown RBP16.38■□□□□ 0.21
PTPN7-204ENST00000462815 FAM182BQ5T319 152 aa16.38■□□□□ 0.21
PTPN7-204ENST00000462815 SPATA31A1Q5TZJ5 1347 aa16.38■□□□□ 0.21
PTPN7-204ENST00000462815 CDK19Q9BWU1 502 aa16.37■□□□□ 0.21
PTPN7-204ENST00000462815 PLEKHG3A1L390 1219 aa16.36■□□□□ 0.21
PTPN7-204ENST00000462815 PAK3O75914 559 aaPredicted RBP16.36■□□□□ 0.21
PTPN7-204ENST00000462815 PRDM11Q9NQV5 511 aa16.36■□□□□ 0.21
PTPN7-204ENST00000462815 CAMTA1Q9Y6Y1 1673 aa16.36■□□□□ 0.21
PTPN7-204ENST00000462815 BAG6P46379 1132 aa16.35■□□□□ 0.21
PTPN7-204ENST00000462815 CHRNA2Q15822 529 aa16.35■□□□□ 0.21
PTPN7-204ENST00000462815 USP19O94966 1318 aa16.35■□□□□ 0.21
PTPN7-204ENST00000462815 ACEP12821 1306 aa16.35■□□□□ 0.21
PTPN7-204ENST00000462815 A0A0G2JS52 829 aa16.34■□□□□ 0.21
PTPN7-204ENST00000462815 MYT1Q01538 1121 aa16.34■□□□□ 0.21
PTPN7-204ENST00000462815 NBPF1Q3BBV0 1214 aa16.34■□□□□ 0.21
PTPN7-204ENST00000462815 CPDO75976 1380 aa16.34■□□□□ 0.21
PTPN7-204ENST00000462815 SSH2Q76I76 1423 aa16.34■□□□□ 0.21
PTPN7-204ENST00000462815 PSDA5PKW4 1024 aaPredicted RBP16.33■□□□□ 0.2
PTPN7-204ENST00000462815 EN1Q05925 392 aaPredicted RBP16.33■□□□□ 0.2
PTPN7-204ENST00000462815 NBPF8Q3BBV2 869 aa16.33■□□□□ 0.2
PTPN7-204ENST00000462815 CCDC61Q9Y6R9 512 aa16.33■□□□□ 0.2
PTPN7-204ENST00000462815 RREB1Q92766 1687 aa16.33■□□□□ 0.2
PTPN7-204ENST00000462815 ZC3H6P61129 1189 aaKnown RBP16.31■□□□□ 0.2
PTPN7-204ENST00000462815 NUTM2GQ5VZR2 741 aa16.31■□□□□ 0.2
PTPN7-204ENST00000462815 QRICH2Q9H0J4 1663 aa16.3■□□□□ 0.2
PTPN7-204ENST00000462815 BARGINQ6ZT62 677 aa16.3■□□□□ 0.2
PTPN7-204ENST00000462815 CAMKK2Q96RR4 588 aa16.3■□□□□ 0.2
PTPN7-204ENST00000462815 PPIP5K1Q6PFW1 1433 aa16.29■□□□□ 0.2
PTPN7-204ENST00000462815 NUP188Q5SRE5 1749 aa16.29■□□□□ 0.2
PTPN7-204ENST00000462815 PARP4Q9UKK3 1724 aaKnown RBP16.29■□□□□ 0.2
PTPN7-204ENST00000462815 SLIT3O75094 1523 aa16.29■□□□□ 0.2
PTPN7-204ENST00000462815 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
PTPN7-204ENST00000462815 EZH2Q15910 746 aaKnown RBP16.28■□□□□ 0.2
PTPN7-204ENST00000462815 STRN4Q9NRL3 753 aa16.28■□□□□ 0.2
PTPN7-204ENST00000462815 PEAK1Q9H792 1746 aa16.28■□□□□ 0.2
PTPN7-204ENST00000462815 LARP1Q6PKG0 1096 aaKnown RBP16.27■□□□□ 0.2
PTPN7-204ENST00000462815 PIK3C2AO00443 1686 aa16.27■□□□□ 0.19
PTPN7-204ENST00000462815 FAM196AQ6ZSG2 479 aa16.26■□□□□ 0.19
PTPN7-204ENST00000462815 USP6P35125 1406 aa16.26■□□□□ 0.19
PTPN7-204ENST00000462815 COL18A1P39060 1754 aa16.26■□□□□ 0.19
PTPN7-204ENST00000462815 PARD3Q8TEW0 1356 aa16.26■□□□□ 0.19
PTPN7-204ENST00000462815 CENPJQ9HC77 1338 aaPredicted RBP16.25■□□□□ 0.19
PTPN7-204ENST00000462815 TRIM37O94972 964 aa16.25■□□□□ 0.19
PTPN7-204ENST00000462815 R3HDM1Q15032 1099 aaKnown RBP16.25■□□□□ 0.19
PTPN7-204ENST00000462815 ABTB2Q8N961 1025 aa16.25■□□□□ 0.19
PTPN7-204ENST00000462815 BRD4O60885 1362 aaPredicted RBP16.25■□□□□ 0.19
PTPN7-204ENST00000462815 LRRC37A3O60309 1634 aa16.24■□□□□ 0.19
PTPN7-204ENST00000462815 TRPM1Q7Z4N2 1603 aa16.24■□□□□ 0.19
PTPN7-204ENST00000462815 GCP02774 474 aa16.24■□□□□ 0.19
PTPN7-204ENST00000462815 CABP2Q9NPB3 220 aa16.24■□□□□ 0.19
PTPN7-204ENST00000462815 TCP11L2Q8N4U5 519 aa16.23■□□□□ 0.19
PTPN7-204ENST00000462815 USP35Q9P2H5 1018 aa16.23■□□□□ 0.19
PTPN7-204ENST00000462815 WNK3Q9BYP7 1800 aa16.22■□□□□ 0.19
PTPN7-204ENST00000462815 CRB1P82279 1406 aa16.21■□□□□ 0.19
PTPN7-204ENST00000462815 SRPK2P78362 688 aaKnown RBP16.21■□□□□ 0.19
PTPN7-204ENST00000462815 THRAP3Q9Y2W1 955 aaKnown RBP16.21■□□□□ 0.19
PTPN7-204ENST00000462815 AATKQ6ZMQ8 1374 aa16.21■□□□□ 0.19
PTPN7-204ENST00000462815 RGPD3A6NKT7 1758 aaPredicted RBP16.21■□□□□ 0.18
PTPN7-204ENST00000462815 RGPD4Q7Z3J3 1758 aa16.21■□□□□ 0.18
PTPN7-204ENST00000462815 APBA3O96018 575 aa16.2■□□□□ 0.18
PTPN7-204ENST00000462815 NLRP13Q86W25 1043 aa16.2■□□□□ 0.18
PTPN7-204ENST00000462815 AKAP12Q02952 1782 aa16.2■□□□□ 0.18
PTPN7-204ENST00000462815 EVA1CP58658 441 aa16.19■□□□□ 0.18
PTPN7-204ENST00000462815 CABP1Q9NZU7 370 aa16.19■□□□□ 0.18
PTPN7-204ENST00000462815 SBF2Q86WG5 1849 aa16.19■□□□□ 0.18
PTPN7-204ENST00000462815 L3MBTL2Q969R5 705 aa16.18■□□□□ 0.18
PTPN7-204ENST00000462815 PDE3BQ13370 1112 aa16.17■□□□□ 0.18
PTPN7-204ENST00000462815 NFAT5O94916 1531 aa16.17■□□□□ 0.18
PTPN7-204ENST00000462815 CPSF1Q10570 1443 aaKnown RBP16.17■□□□□ 0.18
PTPN7-204ENST00000462815 AXIN2Q9Y2T1 843 aa16.16■□□□□ 0.18
PTPN7-204ENST00000462815 OVOS2A0A0G2JMS6 1433 aa16.16■□□□□ 0.18
PTPN7-204ENST00000462815 OVOS2A0A0J9YW53 1432 aa16.16■□□□□ 0.18
PTPN7-204ENST00000462815 OVOS2Q6IE36 1432 aa16.16■□□□□ 0.18
PTPN7-204ENST00000462815 USP54Q70EL1 1684 aa16.14■□□□□ 0.18
PTPN7-204ENST00000462815 BCL9O00512 1426 aa16.14■□□□□ 0.17
PTPN7-204ENST00000462815 NLRP6P59044 892 aa16.14■□□□□ 0.17
PTPN7-204ENST00000462815 CASZ1Q86V15 1759 aa16.13■□□□□ 0.17
PTPN7-204ENST00000462815 RGPD5Q99666 1765 aa16.13■□□□□ 0.17
PTPN7-204ENST00000462815 MON2Q7Z3U7 1717 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms