RNA–Protein interactions for RNA: ENST00000462112.1

SSR1-203, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4 BASIC

Gene SSR1, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-203ENST00000462112 CABP2Q9NPB3 220 aa11.43□□□□□ -0.58
SSR1-203ENST00000462112 SBNO1A3KN83 1393 aa11.42□□□□□ -0.58
SSR1-203ENST00000462112 HDGFL2Q7Z4V5 671 aaPredicted RBP11.42□□□□□ -0.58
SSR1-203ENST00000462112 DDX17Q92841 729 aaKnown RBP11.42□□□□□ -0.58
SSR1-203ENST00000462112 SHPRHQ149N8 1683 aa11.42□□□□□ -0.58
SSR1-203ENST00000462112 PPIP5K1Q6PFW1 1433 aa11.42□□□□□ -0.58
SSR1-203ENST00000462112 SPATA31A3Q5VYP0 1347 aa11.41□□□□□ -0.58
SSR1-203ENST00000462112 ATP7BP35670 1465 aa11.41□□□□□ -0.58
SSR1-203ENST00000462112 XPCQ01831 940 aaPredicted RBP11.41□□□□□ -0.58
SSR1-203ENST00000462112 TMC1Q8TDI8 760 aa11.41□□□□□ -0.58
SSR1-203ENST00000462112 TERF2IPQ9NYB0 399 aa11.41□□□□□ -0.58
SSR1-203ENST00000462112 RGPD8O14715 1765 aaPredicted RBP11.41□□□□□ -0.58
SSR1-203ENST00000462112 PNPLA6Q8IY17 1366 aa11.41□□□□□ -0.58
SSR1-203ENST00000462112 NINLQ9Y2I6 1382 aa11.41□□□□□ -0.58
SSR1-203ENST00000462112 ACEP12821 1306 aa11.4□□□□□ -0.58
SSR1-203ENST00000462112 PRR36Q9H6K5 1346 aa11.4□□□□□ -0.58
SSR1-203ENST00000462112 ZNF772Q68DY9 489 aaPredicted RBP11.4□□□□□ -0.58
SSR1-203ENST00000462112 CABP1Q9NZU7 370 aa11.4□□□□□ -0.58
SSR1-203ENST00000462112 PXDNQ92626 1479 aa11.39□□□□□ -0.59
SSR1-203ENST00000462112 MED1Q15648 1581 aaPredicted RBP11.39□□□□□ -0.59
SSR1-203ENST00000462112 TNS3Q68CZ2 1445 aa11.39□□□□□ -0.59
SSR1-203ENST00000462112 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
SSR1-203ENST00000462112 POLR3AO14802 1390 aaPredicted RBP11.39□□□□□ -0.59
SSR1-203ENST00000462112 USP32Q8NFA0 1604 aa11.38□□□□□ -0.59
SSR1-203ENST00000462112 NGLY1Q96IV0 654 aa11.38□□□□□ -0.59
SSR1-203ENST00000462112 NLRP13Q86W25 1043 aa11.37□□□□□ -0.59
SSR1-203ENST00000462112 ABTB2Q8N961 1025 aa11.37□□□□□ -0.59
SSR1-203ENST00000462112 ADAMTS2O95450 1211 aa11.36□□□□□ -0.59
SSR1-203ENST00000462112 TTC21AQ8NDW8 1320 aa11.35□□□□□ -0.59
SSR1-203ENST00000462112 ZEB1P37275 1124 aaPredicted RBP11.35□□□□□ -0.59
SSR1-203ENST00000462112 C8orf37Q96NL8 207 aa11.35□□□□□ -0.59
SSR1-203ENST00000462112 TESK2Q96S53 571 aa11.35□□□□□ -0.59
SSR1-203ENST00000462112 KTN1Q86UP2 1357 aaKnown RBP11.35□□□□□ -0.59
SSR1-203ENST00000462112 TOPAZ1Q8N9V7 1692 aa11.35□□□□□ -0.59
SSR1-203ENST00000462112 COL22A1Q8NFW1 1626 aaPredicted RBP11.34□□□□□ -0.59
SSR1-203ENST00000462112 PLEKHG5O94827 1062 aa11.33□□□□□ -0.6
SSR1-203ENST00000462112 NLRP6P59044 892 aa11.33□□□□□ -0.6
SSR1-203ENST00000462112 POLR3GLQ9BT43 218 aa11.33□□□□□ -0.6
SSR1-203ENST00000462112 USP6P35125 1406 aa11.33□□□□□ -0.6
SSR1-203ENST00000462112 HSPA5P11021 654 aaKnown RBP11.32□□□□□ -0.6
SSR1-203ENST00000462112 KCNH5Q8NCM2 988 aa11.32□□□□□ -0.6
SSR1-203ENST00000462112 AFF2P51816 1311 aa11.32□□□□□ -0.6
SSR1-203ENST00000462112 SLC12A5Q9H2X9 1139 aa11.31□□□□□ -0.6
SSR1-203ENST00000462112 USP21Q9UK80 565 aa11.31□□□□□ -0.6
SSR1-203ENST00000462112 TTC21BQ7Z4L5 1316 aa11.31□□□□□ -0.6
SSR1-203ENST00000462112 PRDM11Q9NQV5 511 aa11.3□□□□□ -0.6
SSR1-203ENST00000462112 TRPC5Q9UL62 973 aaPredicted RBP11.3□□□□□ -0.6
SSR1-203ENST00000462112 TRPM3Q9HCF6 1732 aaPredicted RBP11.29□□□□□ -0.6
SSR1-203ENST00000462112 CPSF1Q10570 1443 aaKnown RBP11.29□□□□□ -0.6
SSR1-203ENST00000462112 EDC4Q6P2E9 1401 aaKnown RBP11.29□□□□□ -0.6
SSR1-203ENST00000462112 LRP6O75581 1613 aa11.29□□□□□ -0.6
SSR1-203ENST00000462112 RXRBP28702 533 aa11.29□□□□□ -0.6
SSR1-203ENST00000462112 NUTM2GQ5VZR2 741 aa11.29□□□□□ -0.6
SSR1-203ENST00000462112 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.29□□□□□ -0.62e-7■□□□□ 10
SSR1-203ENST00000462112 CABLES1Q8TDN4 633 aa11.29□□□□□ -0.6
SSR1-203ENST00000462112 ANKRD36BQ8N2N9 1353 aa11.28□□□□□ -0.6
SSR1-203ENST00000462112 ALS2Q96Q42 1657 aa11.28□□□□□ -0.6
SSR1-203ENST00000462112 FNBP4Q8N3X1 1017 aaPredicted RBP11.28□□□□□ -0.6
SSR1-203ENST00000462112 QTRT2Q9H974 415 aaKnown RBP11.28□□□□□ -0.6
SSR1-203ENST00000462112 AKAP12Q02952 1782 aa11.27□□□□□ -0.61
SSR1-203ENST00000462112 GCP02774 474 aa11.27□□□□□ -0.61
SSR1-203ENST00000462112 EVA1CP58658 441 aa11.27□□□□□ -0.61
SSR1-203ENST00000462112 RBM6P78332 1123 aaKnown RBP11.27□□□□□ -0.61
SSR1-203ENST00000462112 UNC5CLQ8IV45 518 aa11.27□□□□□ -0.61
SSR1-203ENST00000462112 COG3Q96JB2 828 aa11.27□□□□□ -0.61
SSR1-203ENST00000462112 SPINK5Q9NQ38 1064 aaPredicted RBP11.27□□□□□ -0.61
SSR1-203ENST00000462112 CCDC9Q9Y3X0 531 aaKnown RBP11.27□□□□□ -0.61
SSR1-203ENST00000462112 MARF1Q9Y4F3 1742 aaKnown RBP11.26□□□□□ -0.61
SSR1-203ENST00000462112 A0A1W2PP64 1363 aa11.26□□□□□ -0.61
SSR1-203ENST00000462112 ZBTB7CA1YPR0 619 aa11.25□□□□□ -0.61
SSR1-203ENST00000462112 ZC3H6P61129 1189 aaKnown RBP11.25□□□□□ -0.61
SSR1-203ENST00000462112 RTN4Q9NQC3 1192 aaKnown RBP11.25□□□□□ -0.61
SSR1-203ENST00000462112 USP19O94966 1318 aa11.25□□□□□ -0.61
SSR1-203ENST00000462112 BTG4Q9NY30 223 aa11.24□□□□□ -0.61
SSR1-203ENST00000462112 CGNL1Q0VF96 1302 aa11.24□□□□□ -0.61
SSR1-203ENST00000462112 SSH2Q76I76 1423 aa11.24□□□□□ -0.61
SSR1-203ENST00000462112 MON2Q7Z3U7 1717 aa11.23□□□□□ -0.61
SSR1-203ENST00000462112 FAM83GA6ND36 823 aa11.23□□□□□ -0.61
SSR1-203ENST00000462112 KNSTRNQ9Y448 316 aa11.23□□□□□ -0.61
SSR1-203ENST00000462112 CPDO75976 1380 aa11.23□□□□□ -0.61
SSR1-203ENST00000462112 USP31Q70CQ4 1352 aa11.23□□□□□ -0.61
SSR1-203ENST00000462112 KIAA0232Q92628 1395 aa11.23□□□□□ -0.61
SSR1-203ENST00000462112 COL14A1Q05707 1796 aaKnown RBP11.23□□□□□ -0.61
SSR1-203ENST00000462112 VPS72Q15906 364 aa11.22□□□□□ -0.61
SSR1-203ENST00000462112 POTEAQ6S8J7 498 aa11.22□□□□□ -0.61
SSR1-203ENST00000462112 NME9Q86XW9 330 aa11.22□□□□□ -0.61
SSR1-203ENST00000462112 RGS17Q9UGC6 210 aaPredicted RBP11.22□□□□□ -0.61
SSR1-203ENST00000462112 ABCA3Q99758 1704 aa11.21□□□□□ -0.61
SSR1-203ENST00000462112 NWD2Q9ULI1 1742 aa11.21□□□□□ -0.61
SSR1-203ENST00000462112 SLIT2O94813 1529 aa11.21□□□□□ -0.61
SSR1-203ENST00000462112 SOX12O15370 315 aa11.21□□□□□ -0.61
SSR1-203ENST00000462112 GJD4Q96KN9 370 aaPredicted RBP11.21□□□□□ -0.61
SSR1-203ENST00000462112 PHRF1Q9P1Y6 1649 aaKnown RBP11.2□□□□□ -0.62
SSR1-203ENST00000462112 CD163L1Q9NR16 1453 aa11.2□□□□□ -0.62
SSR1-203ENST00000462112 CDK12Q9NYV4 1490 aaPredicted RBP11.2□□□□□ -0.62
SSR1-203ENST00000462112 AATKQ6ZMQ8 1374 aa11.2□□□□□ -0.62
SSR1-203ENST00000462112 A0A0G2JS52 829 aa11.2□□□□□ -0.62
SSR1-203ENST00000462112 CSB-PGBD3P0DP91 1061 aa11.2□□□□□ -0.62
SSR1-203ENST00000462112 MYT1Q01538 1121 aa11.2□□□□□ -0.62
SSR1-203ENST00000462112 CHRNA2Q15822 529 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms