RNA–Protein interactions for RNA: ENST00000461903.1

HLA-A-205, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,352 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-205ENST00000461903 CPSF1Q10570 1443 aaKnown RBP30.93■■■□□ 2.54
HLA-A-205ENST00000461903 KTN1Q86UP2 1357 aaKnown RBP30.93■■■□□ 2.54
HLA-A-205ENST00000461903 XPCQ01831 940 aaPredicted RBP30.92■■■□□ 2.54
HLA-A-205ENST00000461903 ZNF692Q9BU19 519 aaPredicted RBP30.92■■■□□ 2.54
HLA-A-205ENST00000461903 PXDNQ92626 1479 aa30.92■■■□□ 2.54
HLA-A-205ENST00000461903 KRT28Q7Z3Y7 464 aa30.92■■■□□ 2.54
HLA-A-205ENST00000461903 USP6P35125 1406 aa30.91■■■□□ 2.54
HLA-A-205ENST00000461903 MEX3CQ5U5Q3 659 aaKnown RBP30.91■■■□□ 2.54
HLA-A-205ENST00000461903 SOS2Q07890 1332 aaPredicted RBP30.88■■■□□ 2.53
HLA-A-205ENST00000461903 TRPM3Q9HCF6 1732 aaPredicted RBP30.88■■■□□ 2.53
HLA-A-205ENST00000461903 NRKQ7Z2Y5 1582 aa30.87■■■□□ 2.53
HLA-A-205ENST00000461903 BRD4O60885 1362 aaPredicted RBP30.87■■■□□ 2.53
HLA-A-205ENST00000461903 PAK3O75914 559 aaPredicted RBP30.85■■■□□ 2.53
HLA-A-205ENST00000461903 EDC4Q6P2E9 1401 aaKnown RBP30.85■■■□□ 2.53
HLA-A-205ENST00000461903 SBNO1A3KN83 1393 aa30.84■■■□□ 2.53
HLA-A-205ENST00000461903 PANK3Q9H999 370 aa30.83■■■□□ 2.53
HLA-A-205ENST00000461903 TNS3Q68CZ2 1445 aa30.83■■■□□ 2.53
HLA-A-205ENST00000461903 NSD3Q9BZ95 1437 aa30.81■■■□□ 2.52
HLA-A-205ENST00000461903 UPF1Q92900 1129 aaKnown RBP eCLIP30.81■■■□□ 2.52
HLA-A-205ENST00000461903 LRRC59Q96AG4 307 aaKnown RBP30.8■■■□□ 2.52
HLA-A-205ENST00000461903 CDK12Q9NYV4 1490 aaPredicted RBP30.8■■■□□ 2.52
HLA-A-205ENST00000461903 SSH2Q76I76 1423 aa30.8■■■□□ 2.52
HLA-A-205ENST00000461903 TTC21BQ7Z4L5 1316 aa30.79■■■□□ 2.52
HLA-A-205ENST00000461903 ALS2Q96Q42 1657 aa30.79■■■□□ 2.52
HLA-A-205ENST00000461903 LMOD2Q6P5Q4 547 aa30.79■■■□□ 2.52
HLA-A-205ENST00000461903 TTC21AQ8NDW8 1320 aa30.78■■■□□ 2.52
HLA-A-205ENST00000461903 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.78■■■□□ 2.52
HLA-A-205ENST00000461903 SPATA31A3Q5VYP0 1347 aa30.77■■■□□ 2.52
HLA-A-205ENST00000461903 ARHGEF10O15013 1369 aa30.76■■■□□ 2.52
HLA-A-205ENST00000461903 RXRBP28702 533 aa30.76■■■□□ 2.51
HLA-A-205ENST00000461903 CARD14Q9BXL6 1004 aa30.75■■■□□ 2.51
HLA-A-205ENST00000461903 KIF20BQ96Q89 1820 aa30.75■■■□□ 2.51
HLA-A-205ENST00000461903 PIK3C2AO00443 1686 aa30.74■■■□□ 2.51
HLA-A-205ENST00000461903 NUTM2BA6NNL0 878 aaPredicted RBP30.73■■■□□ 2.51
HLA-A-205ENST00000461903 NUTM2EB1AL46 878 aaPredicted RBP30.73■■■□□ 2.51
HLA-A-205ENST00000461903 DDX10Q13206 875 aaKnown RBP30.73■■■□□ 2.51
HLA-A-205ENST00000461903 NUTM2AQ8IVF1 878 aaPredicted RBP30.73■■■□□ 2.51
HLA-A-205ENST00000461903 ABTB2Q8N961 1025 aa30.73■■■□□ 2.51
HLA-A-205ENST00000461903 KNSTRNQ9Y448 316 aa30.73■■■□□ 2.51
HLA-A-205ENST00000461903 AFF2P51816 1311 aa30.7■■■□□ 2.51
HLA-A-205ENST00000461903 CGNL1Q0VF96 1302 aa30.7■■■□□ 2.51
HLA-A-205ENST00000461903 PNPLA6Q8IY17 1366 aa30.7■■■□□ 2.5
HLA-A-205ENST00000461903 NME9Q86XW9 330 aa30.68■■■□□ 2.5
HLA-A-205ENST00000461903 COL22A1Q8NFW1 1626 aaPredicted RBP30.68■■■□□ 2.5
HLA-A-205ENST00000461903 NUTM2GQ5VZR2 741 aa30.67■■■□□ 2.5
HLA-A-205ENST00000461903 NLRP6P59044 892 aa30.66■■■□□ 2.5
HLA-A-205ENST00000461903 NLRP13Q86W25 1043 aa30.66■■■□□ 2.5
HLA-A-205ENST00000461903 USP54Q70EL1 1684 aa30.65■■■□□ 2.5
HLA-A-205ENST00000461903 PLEKHG5O94827 1062 aa30.64■■■□□ 2.5
HLA-A-205ENST00000461903 NSD2O96028 1365 aa30.63■■■□□ 2.49
HLA-A-205ENST00000461903 USP31Q70CQ4 1352 aa30.63■■■□□ 2.49
HLA-A-205ENST00000461903 ANKRD26Q9UPS8 1709 aa30.62■■■□□ 2.49
HLA-A-205ENST00000461903 PER1O15534 1290 aaPredicted RBP30.62■■■□□ 2.49
HLA-A-205ENST00000461903 ABCA3Q99758 1704 aa30.62■■■□□ 2.49
HLA-A-205ENST00000461903 FYB1O15117 783 aa30.61■■■□□ 2.49
HLA-A-205ENST00000461903 COG3Q96JB2 828 aa30.61■■■□□ 2.49
HLA-A-205ENST00000461903 GGNBP2Q9H3C7 697 aa30.61■■■□□ 2.49
HLA-A-205ENST00000461903 MARF1Q9Y4F3 1742 aaKnown RBP30.61■■■□□ 2.49
HLA-A-205ENST00000461903 PHRF1Q9P1Y6 1649 aaKnown RBP30.61■■■□□ 2.49
HLA-A-205ENST00000461903 OVOS2A0A0J9YW53 1432 aa30.61■■■□□ 2.49
HLA-A-205ENST00000461903 OVOS2Q6IE36 1432 aa30.61■■■□□ 2.49
HLA-A-205ENST00000461903 CRYBG1Q9Y4K1 1723 aa30.6■■■□□ 2.49
HLA-A-205ENST00000461903 HAP1P54257 671 aaPredicted RBP30.6■■■□□ 2.49
HLA-A-205ENST00000461903 RGS12O14924 1447 aa30.6■■■□□ 2.49
HLA-A-205ENST00000461903 ZRANB1Q9UGI0 708 aa30.59■■■□□ 2.49
HLA-A-205ENST00000461903 USP19O94966 1318 aa30.58■■■□□ 2.49
HLA-A-205ENST00000461903 AMER1Q5JTC6 1135 aaPredicted RBP30.57■■■□□ 2.48
HLA-A-205ENST00000461903 C8orf37Q96NL8 207 aa30.57■■■□□ 2.48
HLA-A-205ENST00000461903 SLIT3O75094 1523 aa30.57■■■□□ 2.48
HLA-A-205ENST00000461903 RBM6P78332 1123 aaKnown RBP30.56■■■□□ 2.48
HLA-A-205ENST00000461903 CABLES1Q8TDN4 633 aa30.55■■■□□ 2.48
HLA-A-205ENST00000461903 NPC1L1Q9UHC9 1359 aa30.55■■■□□ 2.48
HLA-A-205ENST00000461903 QTRT2Q9H974 415 aaKnown RBP30.54■■■□□ 2.48
HLA-A-205ENST00000461903 CNGB1Q14028 1251 aaPredicted RBP30.53■■■□□ 2.48
HLA-A-205ENST00000461903 CC2D1BQ5T0F9 858 aaKnown RBP30.53■■■□□ 2.48
HLA-A-205ENST00000461903 KCNH5Q8NCM2 988 aa30.52■■■□□ 2.48
HLA-A-205ENST00000461903 SOX12O15370 315 aa30.51■■■□□ 2.47
HLA-A-205ENST00000461903 MORC1Q86VD1 984 aa30.5■■■□□ 2.47
HLA-A-205ENST00000461903 GCP02774 474 aa30.49■■■□□ 2.47
HLA-A-205ENST00000461903 NFAT5O94916 1531 aa30.47■■■□□ 2.47
HLA-A-205ENST00000461903 NGLY1Q96IV0 654 aa30.45■■■□□ 2.47
HLA-A-205ENST00000461903 ADAMTS2O95450 1211 aa30.44■■■□□ 2.46
HLA-A-205ENST00000461903 TNNT2P45379 298 aaPredicted RBP30.42■■■□□ 2.46
HLA-A-205ENST00000461903 ZC3H6P61129 1189 aaKnown RBP30.42■■■□□ 2.46
HLA-A-205ENST00000461903 ZBTB7CA1YPR0 619 aa30.41■■■□□ 2.46
HLA-A-205ENST00000461903 LTN1O94822 1766 aa30.41■■■□□ 2.46
HLA-A-205ENST00000461903 CPDO75976 1380 aa30.4■■■□□ 2.46
HLA-A-205ENST00000461903 KIAA0232Q92628 1395 aa30.4■■■□□ 2.46
HLA-A-205ENST00000461903 PRDM11Q9NQV5 511 aa30.4■■■□□ 2.46
HLA-A-205ENST00000461903 AATKQ6ZMQ8 1374 aa30.39■■■□□ 2.45
HLA-A-205ENST00000461903 FNBP4Q8N3X1 1017 aaPredicted RBP30.37■■■□□ 2.45
HLA-A-205ENST00000461903 USP21Q9UK80 565 aa30.37■■■□□ 2.45
HLA-A-205ENST00000461903 COL14A1Q05707 1796 aaKnown RBP30.37■■■□□ 2.45
HLA-A-205ENST00000461903 TRPC5Q9UL62 973 aaPredicted RBP30.36■■■□□ 2.45
HLA-A-205ENST00000461903 PARD3Q8TEW0 1356 aa30.35■■■□□ 2.45
HLA-A-205ENST00000461903 MAP2P11137 1827 aaKnown RBP30.35■■■□□ 2.45
HLA-A-205ENST00000461903 ARHGEF25Q86VW2 580 aa30.35■■■□□ 2.45
HLA-A-205ENST00000461903 ATRNO75882 1429 aa30.35■■■□□ 2.45
HLA-A-205ENST00000461903 FBLN1P23142 703 aa30.34■■■□□ 2.45
HLA-A-205ENST00000461903 RRS1Q15050 365 aaKnown RBP30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms