RNA–Protein interactions for RNA: ENST00000461603.5

LMBR1-215, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-215ENST00000461603 THAP11Q96EK4 314 aa9.63□□□□□ -0.87
LMBR1-215ENST00000461603 KDM4CQ9H3R0 1056 aa9.63□□□□□ -0.87
LMBR1-215ENST00000461603 SLC27A5Q9Y2P5 690 aa9.63□□□□□ -0.87
LMBR1-215ENST00000461603 PUS10Q3MIT2 529 aaKnown RBP9.62□□□□□ -0.87
LMBR1-215ENST00000461603 BRICD5Q6PL45 260 aa9.62□□□□□ -0.87
LMBR1-215ENST00000461603 IQGAP2Q13576 1575 aa9.62□□□□□ -0.87
LMBR1-215ENST00000461603 KIF27Q86VH2 1401 aa9.6□□□□□ -0.87
LMBR1-215ENST00000461603 SPDYE5A6NIY4 337 aa9.6□□□□□ -0.87
LMBR1-215ENST00000461603 MSS51Q4VC12 460 aa9.6□□□□□ -0.87
LMBR1-215ENST00000461603 SPSB2Q99619 263 aa9.6□□□□□ -0.87
LMBR1-215ENST00000461603 TBC1D2Q9BYX2 928 aa9.6□□□□□ -0.87
LMBR1-215ENST00000461603 DISP1Q96F81 1524 aa9.6□□□□□ -0.87
LMBR1-215ENST00000461603 WDR7Q9Y4E6 1490 aa9.59□□□□□ -0.87
LMBR1-215ENST00000461603 CARMIL1Q5VZK9 1371 aa9.59□□□□□ -0.87
LMBR1-215ENST00000461603 PTPRMP28827 1452 aa9.59□□□□□ -0.87
LMBR1-215ENST00000461603 CD109Q6YHK3 1445 aa9.58□□□□□ -0.88
LMBR1-215ENST00000461603 SPTLC1O15269 473 aa9.58□□□□□ -0.88
LMBR1-215ENST00000461603 FDX1P10109 184 aa9.58□□□□□ -0.88
LMBR1-215ENST00000461603 PRPF38BQ5VTL8 546 aaKnown RBP9.58□□□□□ -0.88
LMBR1-215ENST00000461603 GOPCQ9HD26 462 aa9.58□□□□□ -0.88
LMBR1-215ENST00000461603 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.58□□□□□ -0.88
LMBR1-215ENST00000461603 SLC6A16Q9GZN6 736 aa9.57□□□□□ -0.88
LMBR1-215ENST00000461603 MAGI3Q5TCQ9 1506 aa9.56□□□□□ -0.88
LMBR1-215ENST00000461603 CFAP43Q8NDM7 1665 aa9.56□□□□□ -0.88
LMBR1-215ENST00000461603 PCF11O94913 1555 aaKnown RBP9.56□□□□□ -0.88
LMBR1-215ENST00000461603 NEUROD2Q15784 382 aa9.56□□□□□ -0.88
LMBR1-215ENST00000461603 PPP1R18Q6NYC8 613 aa9.56□□□□□ -0.88
LMBR1-215ENST00000461603 RSBN1LQ6PCB5 846 aaPredicted RBP9.56□□□□□ -0.88
LMBR1-215ENST00000461603 ILDR2Q71H61 639 aa9.56□□□□□ -0.88
LMBR1-215ENST00000461603 USB1Q9BQ65 265 aaKnown RBP9.56□□□□□ -0.88
LMBR1-215ENST00000461603 GPBP1L1Q9HC44 474 aaPredicted RBP9.56□□□□□ -0.88
LMBR1-215ENST00000461603 ADAMTSL3P82987 1691 aa9.55□□□□□ -0.88
LMBR1-215ENST00000461603 MOXD2PA6NHM9 499 aa9.55□□□□□ -0.88
LMBR1-215ENST00000461603 BRPF1P55201 1214 aaPredicted RBP9.55□□□□□ -0.88
LMBR1-215ENST00000461603 RETREG3Q86VR2 466 aa9.55□□□□□ -0.88
LMBR1-215ENST00000461603 ANKLE1Q8NAG6 615 aa9.55□□□□□ -0.88
LMBR1-215ENST00000461603 NKX2-3Q8TAU0 364 aa9.55□□□□□ -0.88
LMBR1-215ENST00000461603 DISP3Q9P2K9 1392 aa9.54□□□□□ -0.88
LMBR1-215ENST00000461603 SOCS7O14512 581 aa9.54□□□□□ -0.88
LMBR1-215ENST00000461603 SH3D19Q5HYK7 790 aa9.54□□□□□ -0.88
LMBR1-215ENST00000461603 MYSM1Q5VVJ2 828 aa9.54□□□□□ -0.88
LMBR1-215ENST00000461603 RIC3Q7Z5B4 369 aa9.54□□□□□ -0.88
LMBR1-215ENST00000461603 KIAA0556O60303 1618 aa9.53□□□□□ -0.88
LMBR1-215ENST00000461603 TLL1O43897 1013 aa9.53□□□□□ -0.88
LMBR1-215ENST00000461603 MMP16P51512 607 aa9.53□□□□□ -0.88
LMBR1-215ENST00000461603 SKIV2LQ15477 1246 aaKnown RBP9.53□□□□□ -0.88
LMBR1-215ENST00000461603 DESI1Q6ICB0 168 aa9.53□□□□□ -0.88
LMBR1-215ENST00000461603 UGGT2Q9NYU1 1516 aa9.52□□□□□ -0.88
LMBR1-215ENST00000461603 MTMR2Q13614 643 aa9.52□□□□□ -0.89
LMBR1-215ENST00000461603 RNF19BQ6ZMZ0 732 aa9.52□□□□□ -0.89
LMBR1-215ENST00000461603 FAM160A2Q8N612 972 aaPredicted RBP9.52□□□□□ -0.89
LMBR1-215ENST00000461603 FAM117AQ9C073 453 aa9.52□□□□□ -0.89
LMBR1-215ENST00000461603 MADDQ8WXG6 1647 aa9.52□□□□□ -0.89
LMBR1-215ENST00000461603 CLK2P49760 499 aaKnown RBP9.51□□□□□ -0.89
LMBR1-215ENST00000461603 HSPA2P54652 639 aa9.51□□□□□ -0.89
LMBR1-215ENST00000461603 ZBTB3Q9H5J0 574 aa9.51□□□□□ -0.89
LMBR1-215ENST00000461603 PCDHGC3Q9UN70 934 aa9.51□□□□□ -0.89
LMBR1-215ENST00000461603 V9GY48 417 aaPredicted RBP9.51□□□□□ -0.89
LMBR1-215ENST00000461603 RNF223E7ERA6 249 aa9.5□□□□□ -0.89
LMBR1-215ENST00000461603 S1PR4O95977 384 aa9.5□□□□□ -0.89
LMBR1-215ENST00000461603 NDUFV2P19404 249 aa9.5□□□□□ -0.89
LMBR1-215ENST00000461603 BCORL1Q5H9F3 1711 aa9.5□□□□□ -0.89
LMBR1-215ENST00000461603 ARAP3Q8WWN8 1544 aa9.5□□□□□ -0.89
LMBR1-215ENST00000461603 PLEKHG3A1L390 1219 aa9.49□□□□□ -0.89
LMBR1-215ENST00000461603 DXOO77932 396 aaKnown RBP9.49□□□□□ -0.89
LMBR1-215ENST00000461603 HLA-CQ95604 372 aa9.49□□□□□ -0.89
LMBR1-215ENST00000461603 ARID4BQ4LE39 1312 aaPredicted RBP9.49□□□□□ -0.89
LMBR1-215ENST00000461603 C6orf229H3BNL8 230 aa9.48□□□□□ -0.89
LMBR1-215ENST00000461603 GUCA2AQ02747 115 aa9.48□□□□□ -0.89
LMBR1-215ENST00000461603 RIMS1Q86UR5 1692 aaKnown RBP9.48□□□□□ -0.89
LMBR1-215ENST00000461603 RAPGEF3O95398 923 aa9.47□□□□□ -0.89
LMBR1-215ENST00000461603 PRKCSHP14314 528 aaPredicted RBP9.47□□□□□ -0.89
LMBR1-215ENST00000461603 JUNDP17535 347 aa9.47□□□□□ -0.89
LMBR1-215ENST00000461603 ABCA8O94911 1581 aa9.46□□□□□ -0.89
LMBR1-215ENST00000461603 ARID3CA6NKF2 412 aa9.46□□□□□ -0.9
LMBR1-215ENST00000461603 LILRB3O75022 631 aa9.46□□□□□ -0.9
LMBR1-215ENST00000461603 RAPGEF2Q9Y4G8 1499 aa9.46□□□□□ -0.9
LMBR1-215ENST00000461603 HRCP23327 699 aa9.45□□□□□ -0.9
LMBR1-215ENST00000461603 RPIAP49247 311 aa9.45□□□□□ -0.9
LMBR1-215ENST00000461603 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.45□□□□□ -0.9
LMBR1-215ENST00000461603 LIMD1Q9UGP4 676 aa9.45□□□□□ -0.9
LMBR1-215ENST00000461603 PPP2R2DQ66LE6 453 aa9.44□□□□□ -0.9
LMBR1-215ENST00000461603 PCDHB15Q9Y5E8 787 aa9.44□□□□□ -0.9
LMBR1-215ENST00000461603 SPATA31D1Q6ZQQ2 1576 aa9.44□□□□□ -0.9
LMBR1-215ENST00000461603 FRMPD1Q5SYB0 1578 aa9.43□□□□□ -0.9
LMBR1-215ENST00000461603 PTPRNQ16849 979 aa9.43□□□□□ -0.9
LMBR1-215ENST00000461603 PRR7Q8TB68 274 aa9.43□□□□□ -0.9
LMBR1-215ENST00000461603 ABCA9Q8IUA7 1624 aa9.42□□□□□ -0.9
LMBR1-215ENST00000461603 PHLDB1Q86UU1 1377 aa9.41□□□□□ -0.9
LMBR1-215ENST00000461603 SYMPKQ92797 1274 aaKnown RBP9.41□□□□□ -0.9
LMBR1-215ENST00000461603 PCMTD1Q96MG8 357 aaPredicted RBP9.41□□□□□ -0.9
LMBR1-215ENST00000461603 PRKD2Q9BZL6 878 aa9.41□□□□□ -0.9
LMBR1-215ENST00000461603 FCF1Q9Y324 198 aaKnown RBP9.41□□□□□ -0.9
LMBR1-215ENST00000461603 CTTNBP2Q8WZ74 1663 aa9.41□□□□□ -0.9
LMBR1-215ENST00000461603 ARHGEF40Q8TER5 1519 aa9.41□□□□□ -0.9
LMBR1-215ENST00000461603 GOLGA3Q08378 1498 aa9.4□□□□□ -0.9
LMBR1-215ENST00000461603 NUTM2BA6NNL0 878 aaPredicted RBP9.4□□□□□ -0.9
LMBR1-215ENST00000461603 NUTM2EB1AL46 878 aaPredicted RBP9.4□□□□□ -0.9
LMBR1-215ENST00000461603 SLC19A1P41440 591 aa9.4□□□□□ -0.9
LMBR1-215ENST00000461603 NUTM2DQ5VT03 806 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms