RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 RREB1Q92766 1687 aa21.46■■□□□ 1.03
DNMT3A-207ENST00000461228 FAM83GA6ND36 823 aa21.45■■□□□ 1.02
DNMT3A-207ENST00000461228 WASLO00401 505 aaPredicted RBP21.45■■□□□ 1.02
DNMT3A-207ENST00000461228 HRCP23327 699 aa21.45■■□□□ 1.02
DNMT3A-207ENST00000461228 POLR3AO14802 1390 aaPredicted RBP21.45■■□□□ 1.02
DNMT3A-207ENST00000461228 SPATA31A5Q5VU36 1347 aa21.44■■□□□ 1.02
DNMT3A-207ENST00000461228 SPATA31A7Q8IWB4 1347 aa21.44■■□□□ 1.02
DNMT3A-207ENST00000461228 SAFB2Q14151 953 aaKnown RBP eCLIP21.43■■□□□ 1.02
DNMT3A-207ENST00000461228 RGPD3A6NKT7 1758 aaPredicted RBP21.43■■□□□ 1.02
DNMT3A-207ENST00000461228 RGPD4Q7Z3J3 1758 aa21.43■■□□□ 1.02
DNMT3A-207ENST00000461228 BAG6P46379 1132 aa21.42■■□□□ 1.02
DNMT3A-207ENST00000461228 PMFBP1Q8TBY8 1022 aa21.42■■□□□ 1.02
DNMT3A-207ENST00000461228 PARD3Q8TEW0 1356 aa21.42■■□□□ 1.02
DNMT3A-207ENST00000461228 DEFB132Q7Z7B7 95 aa21.41■■□□□ 1.02
DNMT3A-207ENST00000461228 BTG4Q9NY30 223 aa21.41■■□□□ 1.02
DNMT3A-207ENST00000461228 PARP4Q9UKK3 1724 aaKnown RBP21.41■■□□□ 1.02
DNMT3A-207ENST00000461228 LMOD2Q6P5Q4 547 aa21.4■■□□□ 1.02
DNMT3A-207ENST00000461228 TRAK1Q9UPV9 953 aa21.4■■□□□ 1.02
DNMT3A-207ENST00000461228 CCDC9Q9Y3X0 531 aaKnown RBP21.4■■□□□ 1.02
DNMT3A-207ENST00000461228 BRD4O60885 1362 aaPredicted RBP21.38■■□□□ 1.01
DNMT3A-207ENST00000461228 MINK1Q8N4C8 1332 aaPredicted RBP21.38■■□□□ 1.01
DNMT3A-207ENST00000461228 CPDO75976 1380 aa21.37■■□□□ 1.01
DNMT3A-207ENST00000461228 FAM98CQ17RN3 349 aaKnown RBP21.37■■□□□ 1.01
DNMT3A-207ENST00000461228 NUP188Q5SRE5 1749 aa21.37■■□□□ 1.01
DNMT3A-207ENST00000461228 HIRIP3Q9BW71 556 aaPredicted RBP21.36■■□□□ 1.01
DNMT3A-207ENST00000461228 WNK3Q9BYP7 1800 aa21.36■■□□□ 1.01
DNMT3A-207ENST00000461228 DCAF11Q8TEB1 546 aa21.35■■□□□ 1.01
DNMT3A-207ENST00000461228 PRDM11Q9NQV5 511 aa21.35■■□□□ 1.01
DNMT3A-207ENST00000461228 KIAA0232Q92628 1395 aa21.35■■□□□ 1.01
DNMT3A-207ENST00000461228 QRICH2Q9H0J4 1663 aa21.34■■□□□ 1.01
DNMT3A-207ENST00000461228 SPATA31A1Q5TZJ5 1347 aa21.34■■□□□ 1.01
DNMT3A-207ENST00000461228 NGDNQ8NEJ9 315 aaKnown RBP21.34■■□□□ 1.01
DNMT3A-207ENST00000461228 SSH2Q76I76 1423 aa21.34■■□□□ 1.01
DNMT3A-207ENST00000461228 USP19O94966 1318 aa21.33■■□□□ 1.01
DNMT3A-207ENST00000461228 A0A0G2JS52 829 aa21.31■■□□□ 1
DNMT3A-207ENST00000461228 MYT1Q01538 1121 aa21.31■■□□□ 1
DNMT3A-207ENST00000461228 SLIT3O75094 1523 aa21.3■■□□□ 1
DNMT3A-207ENST00000461228 PEAK1Q9H792 1746 aa21.3■■□□□ 1
DNMT3A-207ENST00000461228 NUDT16Q96DE0 195 aaKnown RBP21.3■■□□□ 1
DNMT3A-207ENST00000461228 CAMTA1Q9Y6Y1 1673 aa21.3■■□□□ 1
DNMT3A-207ENST00000461228 PLEKHG3A1L390 1219 aa21.29■■□□□ 1
DNMT3A-207ENST00000461228 BARGINQ6ZT62 677 aa21.29■■□□□ 1
DNMT3A-207ENST00000461228 CCDC61Q9Y6R9 512 aa21.28■■□□□ 1
DNMT3A-207ENST00000461228 LRRC37A3O60309 1634 aa21.28■■□□□ 1
DNMT3A-207ENST00000461228 COL5A2P05997 1499 aaPredicted RBP21.27■■□□□ 1
DNMT3A-207ENST00000461228 ABCC6O95255 1503 aa21.27■■□□□ 1
DNMT3A-207ENST00000461228 FAM196AQ6ZSG2 479 aa21.26■□□□□ 0.99
DNMT3A-207ENST00000461228 PIK3C2AO00443 1686 aa21.25■□□□□ 0.99
DNMT3A-207ENST00000461228 SBF2Q86WG5 1849 aa21.25■□□□□ 0.99
DNMT3A-207ENST00000461228 C11orf95C9JLR9 678 aaPredicted RBP21.25■□□□□ 0.99
DNMT3A-207ENST00000461228 PAK3O75914 559 aaPredicted RBP21.25■□□□□ 0.99
DNMT3A-207ENST00000461228 TRPM1Q7Z4N2 1603 aa21.25■□□□□ 0.99
DNMT3A-207ENST00000461228 THRAP3Q9Y2W1 955 aaKnown RBP21.24■□□□□ 0.99
DNMT3A-207ENST00000461228 ACEP12821 1306 aa21.24■□□□□ 0.99
DNMT3A-207ENST00000461228 AKAP12Q02952 1782 aa21.23■□□□□ 0.99
DNMT3A-207ENST00000461228 PPIP5K1Q6PFW1 1433 aa21.23■□□□□ 0.99
DNMT3A-207ENST00000461228 KDM2AQ9Y2K7 1162 aa21.23■□□□□ 0.99
DNMT3A-207ENST00000461228 USP54Q70EL1 1684 aa21.23■□□□□ 0.99
DNMT3A-207ENST00000461228 COL18A1P39060 1754 aa21.23■□□□□ 0.99
DNMT3A-207ENST00000461228 EN1Q05925 392 aaPredicted RBP21.22■□□□□ 0.99
DNMT3A-207ENST00000461228 CDK19Q9BWU1 502 aa21.22■□□□□ 0.99
DNMT3A-207ENST00000461228 USP6P35125 1406 aa21.21■□□□□ 0.99
DNMT3A-207ENST00000461228 PLEKHG5O94827 1062 aa21.21■□□□□ 0.99
DNMT3A-207ENST00000461228 NBPF8Q3BBV2 869 aa21.21■□□□□ 0.99
DNMT3A-207ENST00000461228 CRB1P82279 1406 aa21.21■□□□□ 0.99
DNMT3A-207ENST00000461228 CAMKK2Q96RR4 588 aa21.2■□□□□ 0.98
DNMT3A-207ENST00000461228 OVOS2A0A0G2JMS6 1433 aa21.19■□□□□ 0.98
DNMT3A-207ENST00000461228 OVOS2A0A0J9YW53 1432 aa21.19■□□□□ 0.98
DNMT3A-207ENST00000461228 BCL9O00512 1426 aa21.19■□□□□ 0.98
DNMT3A-207ENST00000461228 OVOS2Q6IE36 1432 aa21.19■□□□□ 0.98
DNMT3A-207ENST00000461228 PSDA5PKW4 1024 aaPredicted RBP21.18■□□□□ 0.98
DNMT3A-207ENST00000461228 TCP11L2Q8N4U5 519 aa21.17■□□□□ 0.98
DNMT3A-207ENST00000461228 CENPJQ9HC77 1338 aaPredicted RBP21.17■□□□□ 0.98
DNMT3A-207ENST00000461228 AATKQ6ZMQ8 1374 aa21.17■□□□□ 0.98
DNMT3A-207ENST00000461228 CHRNA2Q15822 529 aa21.16■□□□□ 0.98
DNMT3A-207ENST00000461228 NLRP13Q86W25 1043 aa21.16■□□□□ 0.98
DNMT3A-207ENST00000461228 MON2Q7Z3U7 1717 aa21.15■□□□□ 0.98
DNMT3A-207ENST00000461228 CASZ1Q86V15 1759 aa21.15■□□□□ 0.98
DNMT3A-207ENST00000461228 ZC3H6P61129 1189 aaKnown RBP21.14■□□□□ 0.97
DNMT3A-207ENST00000461228 R3HDM1Q15032 1099 aaKnown RBP21.14■□□□□ 0.97
DNMT3A-207ENST00000461228 EZH2Q15910 746 aaKnown RBP21.14■□□□□ 0.97
DNMT3A-207ENST00000461228 ABTB2Q8N961 1025 aa21.14■□□□□ 0.97
DNMT3A-207ENST00000461228 STRN4Q9NRL3 753 aa21.14■□□□□ 0.97
DNMT3A-207ENST00000461228 FAM182BQ5T319 152 aa21.13■□□□□ 0.97
DNMT3A-207ENST00000461228 CPSF1Q10570 1443 aaKnown RBP21.12■□□□□ 0.97
DNMT3A-207ENST00000461228 TRIM37O94972 964 aa21.12■□□□□ 0.97
DNMT3A-207ENST00000461228 GCP02774 474 aa21.12■□□□□ 0.97
DNMT3A-207ENST00000461228 PDE3BQ13370 1112 aa21.11■□□□□ 0.97
DNMT3A-207ENST00000461228 NFAT5O94916 1531 aa21.1■□□□□ 0.97
DNMT3A-207ENST00000461228 LARP1Q6PKG0 1096 aaKnown RBP21.1■□□□□ 0.97
DNMT3A-207ENST00000461228 EVA1CP58658 441 aa21.09■□□□□ 0.97
DNMT3A-207ENST00000461228 SBNO2Q9Y2G9 1366 aa21.09■□□□□ 0.97
DNMT3A-207ENST00000461228 NINLQ9Y2I6 1382 aa21.09■□□□□ 0.97
DNMT3A-207ENST00000461228 APBA3O96018 575 aa21.08■□□□□ 0.97
DNMT3A-207ENST00000461228 SRPK2P78362 688 aaKnown RBP21.08■□□□□ 0.97
DNMT3A-207ENST00000461228 RGPD5Q99666 1765 aa21.07■□□□□ 0.96
DNMT3A-207ENST00000461228 NHSQ6T4R5 1651 aa21.06■□□□□ 0.96
DNMT3A-207ENST00000461228 NBPF1Q3BBV0 1214 aa21.06■□□□□ 0.96
DNMT3A-207ENST00000461228 NUTM2GQ5VZR2 741 aa21.06■□□□□ 0.96
DNMT3A-207ENST00000461228 CDCA7Q9BWT1 371 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms