RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 ANKRD26Q9UPS8 1709 aa22.68■■□□□ 1.22
NELFCD-201ENST00000460601 ORAI2Q96SN7 254 aa22.67■■□□□ 1.22
NELFCD-201ENST00000460601 XIRP1Q702N8 1843 aaKnown RBP22.67■■□□□ 1.22
NELFCD-201ENST00000460601 TTC21BQ7Z4L5 1316 aa22.66■■□□□ 1.22
NELFCD-201ENST00000460601 PHF8Q9UPP1 1060 aa22.66■■□□□ 1.22
NELFCD-201ENST00000460601 MTHFSP49914 203 aa22.64■■□□□ 1.22
NELFCD-201ENST00000460601 SSH2Q76I76 1423 aa22.64■■□□□ 1.22
NELFCD-201ENST00000460601 LRRC7Q96NW7 1537 aa22.64■■□□□ 1.22
NELFCD-201ENST00000460601 CENPBP07199 599 aaPredicted RBP22.63■■□□□ 1.21
NELFCD-201ENST00000460601 ATF3P18847 181 aa22.61■■□□□ 1.21
NELFCD-201ENST00000460601 C1orf167Q5SNV9 1468 aa22.61■■□□□ 1.21
NELFCD-201ENST00000460601 XPCQ01831 940 aaPredicted RBP22.6■■□□□ 1.21
NELFCD-201ENST00000460601 DMRT2Q9Y5R5 561 aa22.6■■□□□ 1.21
NELFCD-201ENST00000460601 FOXO3O43524 673 aa22.6■■□□□ 1.21
NELFCD-201ENST00000460601 COG3Q96JB2 828 aa22.6■■□□□ 1.21
NELFCD-201ENST00000460601 MST1RQ04912 1400 aa22.6■■□□□ 1.21
NELFCD-201ENST00000460601 NCOA3Q9Y6Q9 1424 aa22.6■■□□□ 1.21
NELFCD-201ENST00000460601 ADAMTS8Q9UP79 889 aa22.59■■□□□ 1.21
NELFCD-201ENST00000460601 MSH6P52701 1360 aa22.59■■□□□ 1.21
NELFCD-201ENST00000460601 PAK3O75914 559 aaPredicted RBP22.58■■□□□ 1.2
NELFCD-201ENST00000460601 NUTM2GQ5VZR2 741 aa22.58■■□□□ 1.2
NELFCD-201ENST00000460601 DCCP43146 1447 aa22.57■■□□□ 1.2
NELFCD-201ENST00000460601 PIK3C2AO00443 1686 aa22.57■■□□□ 1.2
NELFCD-201ENST00000460601 OVOS2A0A0J9YW53 1432 aa22.56■■□□□ 1.2
NELFCD-201ENST00000460601 OVOS2Q6IE36 1432 aa22.56■■□□□ 1.2
NELFCD-201ENST00000460601 SOX12O15370 315 aa22.56■■□□□ 1.2
NELFCD-201ENST00000460601 PPM1GO15355 546 aaPredicted RBP22.55■■□□□ 1.2
NELFCD-201ENST00000460601 DDX17Q92841 729 aaKnown RBP22.55■■□□□ 1.2
NELFCD-201ENST00000460601 PSME1Q06323 249 aa22.55■■□□□ 1.2
NELFCD-201ENST00000460601 RRS1Q15050 365 aaKnown RBP22.55■■□□□ 1.2
NELFCD-201ENST00000460601 WDR43Q15061 677 aaKnown RBP eCLIP22.55■■□□□ 1.2
NELFCD-201ENST00000460601 CADPS2Q86UW7 1296 aa22.55■■□□□ 1.2
NELFCD-201ENST00000460601 EMILIN1Q9Y6C2 1016 aa22.55■■□□□ 1.2
NELFCD-201ENST00000460601 POLKQ9UBT6 870 aa22.54■■□□□ 1.2
NELFCD-201ENST00000460601 TTC21AQ8NDW8 1320 aa22.54■■□□□ 1.2
NELFCD-201ENST00000460601 SHPRHQ149N8 1683 aa22.53■■□□□ 1.2
NELFCD-201ENST00000460601 MAP2P11137 1827 aaKnown RBP22.52■■□□□ 1.2
NELFCD-201ENST00000460601 ABTB2Q8N961 1025 aa22.52■■□□□ 1.2
NELFCD-201ENST00000460601 NLRP6P59044 892 aa22.51■■□□□ 1.19
NELFCD-201ENST00000460601 SALL2Q9Y467 1007 aaPredicted RBP22.5■■□□□ 1.19
NELFCD-201ENST00000460601 SCAF1Q9H7N4 1312 aaKnown RBP22.5■■□□□ 1.19
NELFCD-201ENST00000460601 COL3A1P02461 1466 aaPredicted RBP22.49■■□□□ 1.19
NELFCD-201ENST00000460601 BLMP54132 1417 aaPredicted RBP22.49■■□□□ 1.19
NELFCD-201ENST00000460601 CCDC146Q8IYE0 955 aa22.49■■□□□ 1.19
NELFCD-201ENST00000460601 CFAP53Q96M91 514 aa22.49■■□□□ 1.19
NELFCD-201ENST00000460601 MARF1Q9Y4F3 1742 aaKnown RBP22.48■■□□□ 1.19
NELFCD-201ENST00000460601 AATKQ6ZMQ8 1374 aa22.48■■□□□ 1.19
NELFCD-201ENST00000460601 PLEKHG5O94827 1062 aa22.48■■□□□ 1.19
NELFCD-201ENST00000460601 KIF1AQ12756 1690 aa22.48■■□□□ 1.19
NELFCD-201ENST00000460601 USP31Q70CQ4 1352 aa22.47■■□□□ 1.19
NELFCD-201ENST00000460601 ZBED9Q6R2W3 1325 aa22.47■■□□□ 1.19
NELFCD-201ENST00000460601 PNPLA6Q8IY17 1366 aa22.45■■□□□ 1.19
NELFCD-201ENST00000460601 KRT28Q7Z3Y7 464 aa22.45■■□□□ 1.18
NELFCD-201ENST00000460601 LMOD2Q6P5Q4 547 aa22.45■■□□□ 1.18
NELFCD-201ENST00000460601 BRINP3Q76B58 766 aa22.45■■□□□ 1.18
NELFCD-201ENST00000460601 SLAIN2Q9P270 581 aa22.45■■□□□ 1.18
NELFCD-201ENST00000460601 TRPM3Q9HCF6 1732 aaPredicted RBP22.44■■□□□ 1.18
NELFCD-201ENST00000460601 SMG6Q86US8 1419 aaKnown RBP22.43■■□□□ 1.18
NELFCD-201ENST00000460601 LTBP4Q8N2S1 1624 aa22.43■■□□□ 1.18
NELFCD-201ENST00000460601 U2SURPO15042 1029 aaKnown RBP22.42■■□□□ 1.18
NELFCD-201ENST00000460601 U2AF1L5P0DN76 240 aaPredicted RBP22.42■■□□□ 1.18
NELFCD-201ENST00000460601 U2AF1Q01081 240 aaKnown RBP eCLIP22.42■■□□□ 1.183e-8■□□□□ 9.2
NELFCD-201ENST00000460601 PEAK1Q9H792 1746 aa22.41■■□□□ 1.18
NELFCD-201ENST00000460601 MAP3K19Q56UN5 1328 aa22.41■■□□□ 1.18
NELFCD-201ENST00000460601 CDK12Q9NYV4 1490 aaPredicted RBP22.41■■□□□ 1.18
NELFCD-201ENST00000460601 DIAPH1O60610 1272 aaKnown RBP22.4■■□□□ 1.18
NELFCD-201ENST00000460601 AEBP2Q6ZN18 517 aaPredicted RBP22.39■■□□□ 1.18
NELFCD-201ENST00000460601 USP54Q70EL1 1684 aa22.39■■□□□ 1.17
NELFCD-201ENST00000460601 INSRP06213 1382 aa22.39■■□□□ 1.17
NELFCD-201ENST00000460601 HSP90AB2PQ58FF8 381 aa22.38■■□□□ 1.17
NELFCD-201ENST00000460601 NPHP3Q7Z494 1330 aa22.38■■□□□ 1.17
NELFCD-201ENST00000460601 APAF1O14727 1248 aa22.37■■□□□ 1.17
NELFCD-201ENST00000460601 PXDNQ92626 1479 aa22.36■■□□□ 1.17
NELFCD-201ENST00000460601 IL13P35225 146 aa22.35■■□□□ 1.17
NELFCD-201ENST00000460601 NUDCQ9Y266 331 aa22.35■■□□□ 1.17
NELFCD-201ENST00000460601 ALS2Q96Q42 1657 aa22.35■■□□□ 1.17
NELFCD-201ENST00000460601 NFAT5O94916 1531 aa22.33■■□□□ 1.16
NELFCD-201ENST00000460601 HMOX1P09601 288 aa22.32■■□□□ 1.16
NELFCD-201ENST00000460601 AMPHP49418 695 aa22.32■■□□□ 1.16
NELFCD-201ENST00000460601 EIF4A2Q14240 407 aaKnown RBP22.32■■□□□ 1.16
NELFCD-201ENST00000460601 RRP7AQ9Y3A4 280 aaKnown RBP22.31■■□□□ 1.16
NELFCD-201ENST00000460601 SBNO1A3KN83 1393 aa22.31■■□□□ 1.16
NELFCD-201ENST00000460601 ZBTB7CA1YPR0 619 aa22.31■■□□□ 1.16
NELFCD-201ENST00000460601 GCP02774 474 aa22.31■■□□□ 1.16
NELFCD-201ENST00000460601 FLT4P35916 1363 aa22.3■■□□□ 1.16
NELFCD-201ENST00000460601 NEUROD2Q15784 382 aa22.3■■□□□ 1.16
NELFCD-201ENST00000460601 CABLES1Q8TDN4 633 aa22.3■■□□□ 1.16
NELFCD-201ENST00000460601 RUNDC1Q96C34 613 aa22.3■■□□□ 1.16
NELFCD-201ENST00000460601 TNS3Q68CZ2 1445 aa22.3■■□□□ 1.16
NELFCD-201ENST00000460601 LTN1O94822 1766 aa22.3■■□□□ 1.16
NELFCD-201ENST00000460601 PLEKHF1Q96S99 279 aa22.3■■□□□ 1.16
NELFCD-201ENST00000460601 MED1Q15648 1581 aaPredicted RBP22.29■■□□□ 1.16
NELFCD-201ENST00000460601 CDCA7LQ96GN5 454 aa22.29■■□□□ 1.16
NELFCD-201ENST00000460601 USP19O94966 1318 aa22.29■■□□□ 1.16
NELFCD-201ENST00000460601 HOXC9P31274 260 aa22.28■■□□□ 1.16
NELFCD-201ENST00000460601 TCP11L2Q8N4U5 519 aa22.28■■□□□ 1.16
NELFCD-201ENST00000460601 SLIT3O75094 1523 aa22.28■■□□□ 1.16
NELFCD-201ENST00000460601 IQSEC2Q5JU85 1478 aa22.28■■□□□ 1.16
NELFCD-201ENST00000460601 SPATA31A3Q5VYP0 1347 aa22.28■■□□□ 1.16
NELFCD-201ENST00000460601 SOS2Q07890 1332 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms