RNA–Protein interactions for RNA: ENST00000460390.6

EXD3-202, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 2

Gene EXD3, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-202ENST00000460390 PXDNQ92626 1479 aa26.57■■□□□ 1.84
EXD3-202ENST00000460390 KRT28Q7Z3Y7 464 aa26.56■■□□□ 1.84
EXD3-202ENST00000460390 CABP1Q9NZU7 370 aa26.56■■□□□ 1.84
EXD3-202ENST00000460390 POLR3AO14802 1390 aaPredicted RBP26.56■■□□□ 1.84
EXD3-202ENST00000460390 XPCQ01831 940 aaPredicted RBP26.56■■□□□ 1.84
EXD3-202ENST00000460390 ACEP12821 1306 aa26.55■■□□□ 1.84
EXD3-202ENST00000460390 MARF1Q9Y4F3 1742 aaKnown RBP26.55■■□□□ 1.84
EXD3-202ENST00000460390 FNBP4Q8N3X1 1017 aaPredicted RBP26.54■■□□□ 1.84
EXD3-202ENST00000460390 TMC1Q8TDI8 760 aa26.53■■□□□ 1.84
EXD3-202ENST00000460390 NINLQ9Y2I6 1382 aa26.52■■□□□ 1.84
EXD3-202ENST00000460390 ATRNO75882 1429 aa26.51■■□□□ 1.83
EXD3-202ENST00000460390 AKAP12Q02952 1782 aa26.5■■□□□ 1.83
EXD3-202ENST00000460390 SBNO1A3KN83 1393 aa26.5■■□□□ 1.83
EXD3-202ENST00000460390 TRPM3Q9HCF6 1732 aaPredicted RBP26.49■■□□□ 1.83
EXD3-202ENST00000460390 ZNF692Q9BU19 519 aaPredicted RBP26.48■■□□□ 1.83
EXD3-202ENST00000460390 SPATA31A3Q5VYP0 1347 aa26.47■■□□□ 1.83
EXD3-202ENST00000460390 TNS3Q68CZ2 1445 aa26.47■■□□□ 1.83
EXD3-202ENST00000460390 BRD4O60885 1362 aaPredicted RBP26.47■■□□□ 1.83
EXD3-202ENST00000460390 HDGFL2Q7Z4V5 671 aaPredicted RBP26.46■■□□□ 1.83
EXD3-202ENST00000460390 SLC12A5Q9H2X9 1139 aa26.46■■□□□ 1.83
EXD3-202ENST00000460390 TERF2IPQ9NYB0 399 aa26.46■■□□□ 1.83
EXD3-202ENST00000460390 PAK3O75914 559 aaPredicted RBP26.45■■□□□ 1.82
EXD3-202ENST00000460390 USP6P35125 1406 aa26.44■■□□□ 1.82
EXD3-202ENST00000460390 ARHGEF10O15013 1369 aa26.44■■□□□ 1.82
EXD3-202ENST00000460390 MON2Q7Z3U7 1717 aa26.44■■□□□ 1.82
EXD3-202ENST00000460390 POLR3GLQ9BT43 218 aa26.44■■□□□ 1.82
EXD3-202ENST00000460390 CPSF1Q10570 1443 aaKnown RBP26.43■■□□□ 1.82
EXD3-202ENST00000460390 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.43■■□□□ 1.82
EXD3-202ENST00000460390 LMOD2Q6P5Q4 547 aa26.43■■□□□ 1.82
EXD3-202ENST00000460390 BCL9LQ86UU0 1499 aa26.43■■□□□ 1.82
EXD3-202ENST00000460390 ALS2Q96Q42 1657 aa26.43■■□□□ 1.82
EXD3-202ENST00000460390 KTN1Q86UP2 1357 aaKnown RBP26.42■■□□□ 1.82
EXD3-202ENST00000460390 HAP1P54257 671 aaPredicted RBP26.41■■□□□ 1.82
EXD3-202ENST00000460390 MYOM1P52179 1685 aa26.41■■□□□ 1.82
EXD3-202ENST00000460390 CD163L1Q9NR16 1453 aa26.4■■□□□ 1.82
EXD3-202ENST00000460390 GJD4Q96KN9 370 aaPredicted RBP26.39■■□□□ 1.81
EXD3-202ENST00000460390 A0A1W2PP64 1363 aa26.38■■□□□ 1.81
EXD3-202ENST00000460390 ANKRD36BQ8N2N9 1353 aa26.38■■□□□ 1.81
EXD3-202ENST00000460390 NRKQ7Z2Y5 1582 aa26.37■■□□□ 1.81
EXD3-202ENST00000460390 C11orf95C9JLR9 678 aaPredicted RBP26.36■■□□□ 1.81
EXD3-202ENST00000460390 CCDC125Q86Z20 511 aa26.36■■□□□ 1.81
EXD3-202ENST00000460390 EP400Q96L91 3159 aa26.36■■□□□ 1.81
EXD3-202ENST00000460390 SSH2Q76I76 1423 aa26.35■■□□□ 1.81
EXD3-202ENST00000460390 UNC5CLQ8IV45 518 aa26.35■■□□□ 1.81
EXD3-202ENST00000460390 ABTB2Q8N961 1025 aa26.35■■□□□ 1.81
EXD3-202ENST00000460390 TTC21AQ8NDW8 1320 aa26.35■■□□□ 1.81
EXD3-202ENST00000460390 ZRANB1Q9UGI0 708 aa26.34■■□□□ 1.81
EXD3-202ENST00000460390 EDC4Q6P2E9 1401 aaKnown RBP26.34■■□□□ 1.81
EXD3-202ENST00000460390 KIF7Q2M1P5 1343 aa26.34■■□□□ 1.81
EXD3-202ENST00000460390 TTC21BQ7Z4L5 1316 aa26.34■■□□□ 1.81
EXD3-202ENST00000460390 SLIT2O94813 1529 aa26.33■■□□□ 1.81
EXD3-202ENST00000460390 ABCA3Q99758 1704 aa26.3■■□□□ 1.8
EXD3-202ENST00000460390 GLI3P10071 1580 aa26.3■■□□□ 1.8
EXD3-202ENST00000460390 NLRP13Q86W25 1043 aa26.3■■□□□ 1.8
EXD3-202ENST00000460390 PIK3C2AO00443 1686 aa26.3■■□□□ 1.8
EXD3-202ENST00000460390 CCDC7Q96M83 1385 aa26.29■■□□□ 1.8
EXD3-202ENST00000460390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.29■■□□□ 1.8
EXD3-202ENST00000460390 PLCH1Q4KWH8 1693 aa26.28■■□□□ 1.8
EXD3-202ENST00000460390 PLEKHG5O94827 1062 aa26.28■■□□□ 1.8
EXD3-202ENST00000460390 NUTM2GQ5VZR2 741 aa26.28■■□□□ 1.8
EXD3-202ENST00000460390 NWD2Q9ULI1 1742 aa26.27■■□□□ 1.8
EXD3-202ENST00000460390 CRYBG1Q9Y4K1 1723 aa26.27■■□□□ 1.8
EXD3-202ENST00000460390 NLRP6P59044 892 aa26.27■■□□□ 1.8
EXD3-202ENST00000460390 CABLES1Q8TDN4 633 aa26.26■■□□□ 1.79
EXD3-202ENST00000460390 CCDC9Q9Y3X0 531 aaKnown RBP26.26■■□□□ 1.79
EXD3-202ENST00000460390 WASHC2AQ641Q2 1341 aa26.26■■□□□ 1.79
EXD3-202ENST00000460390 PHRF1Q9P1Y6 1649 aaKnown RBP26.25■■□□□ 1.79
EXD3-202ENST00000460390 BLMP54132 1417 aaPredicted RBP26.23■■□□□ 1.79
EXD3-202ENST00000460390 SRCAPQ6ZRS2 3230 aa26.23■■□□□ 1.79
EXD3-202ENST00000460390 SF3B2Q13435 895 aaKnown RBP26.22■■□□□ 1.79
EXD3-202ENST00000460390 BRWD3Q6RI45 1802 aa26.22■■□□□ 1.79
EXD3-202ENST00000460390 KIF20BQ96Q89 1820 aa26.22■■□□□ 1.79
EXD3-202ENST00000460390 USP54Q70EL1 1684 aa26.22■■□□□ 1.79
EXD3-202ENST00000460390 NSD3Q9BZ95 1437 aa26.22■■□□□ 1.79
EXD3-202ENST00000460390 USP19O94966 1318 aa26.22■■□□□ 1.79
EXD3-202ENST00000460390 PANK3Q9H999 370 aa26.22■■□□□ 1.79
EXD3-202ENST00000460390 USP31Q70CQ4 1352 aa26.21■■□□□ 1.79
EXD3-202ENST00000460390 VPS72Q15906 364 aa26.21■■□□□ 1.79
EXD3-202ENST00000460390 NME9Q86XW9 330 aa26.21■■□□□ 1.79
EXD3-202ENST00000460390 CARD14Q9BXL6 1004 aa26.2■■□□□ 1.78
EXD3-202ENST00000460390 A0A0G2JS52 829 aa26.18■■□□□ 1.78
EXD3-202ENST00000460390 MYT1Q01538 1121 aa26.18■■□□□ 1.78
EXD3-202ENST00000460390 SEPT12Q8IYM1 358 aa26.18■■□□□ 1.78
EXD3-202ENST00000460390 SLIT3O75094 1523 aa26.17■■□□□ 1.78
EXD3-202ENST00000460390 CGNL1Q0VF96 1302 aa26.17■■□□□ 1.78
EXD3-202ENST00000460390 KCNH5Q8NCM2 988 aa26.16■■□□□ 1.78
EXD3-202ENST00000460390 GCP02774 474 aa26.15■■□□□ 1.78
EXD3-202ENST00000460390 COG3Q96JB2 828 aa26.15■■□□□ 1.78
EXD3-202ENST00000460390 OVOS2A0A0J9YW53 1432 aa26.14■■□□□ 1.77
EXD3-202ENST00000460390 OVOS2Q6IE36 1432 aa26.14■■□□□ 1.77
EXD3-202ENST00000460390 FYB1O15117 783 aa26.14■■□□□ 1.77
EXD3-202ENST00000460390 KNSTRNQ9Y448 316 aa26.14■■□□□ 1.77
EXD3-202ENST00000460390 COL14A1Q05707 1796 aaKnown RBP26.12■■□□□ 1.77
EXD3-202ENST00000460390 KRT27Q7Z3Y8 459 aa26.12■■□□□ 1.77
EXD3-202ENST00000460390 PRDM11Q9NQV5 511 aa26.12■■□□□ 1.77
EXD3-202ENST00000460390 NRAPQ86VF7 1730 aa26.11■■□□□ 1.77
EXD3-202ENST00000460390 ZC3H6P61129 1189 aaKnown RBP26.11■■□□□ 1.77
EXD3-202ENST00000460390 GGNBP2Q9H3C7 697 aa26.11■■□□□ 1.77
EXD3-202ENST00000460390 CPDO75976 1380 aa26.1■■□□□ 1.77
EXD3-202ENST00000460390 KIAA0232Q92628 1395 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms