RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 DEFB132Q7Z7B7 95 aa21.2■□□□□ 0.98
ATG4B-213ENST00000460211 NGDNQ8NEJ9 315 aaKnown RBP21.2■□□□□ 0.98
ATG4B-213ENST00000460211 PRR36Q9H6K5 1346 aa21.2■□□□□ 0.98
ATG4B-213ENST00000460211 GPRASP1Q5JY77 1395 aa21.2■□□□□ 0.98
ATG4B-213ENST00000460211 TNS3Q68CZ2 1445 aa21.2■□□□□ 0.98
ATG4B-213ENST00000460211 PLCH1Q4KWH8 1693 aa21.19■□□□□ 0.98
ATG4B-213ENST00000460211 SEPT12Q8IYM1 358 aa21.19■□□□□ 0.98
ATG4B-213ENST00000460211 CCDC9Q9Y3X0 531 aaKnown RBP21.19■□□□□ 0.98
ATG4B-213ENST00000460211 CCDC61Q9Y6R9 512 aa21.19■□□□□ 0.98
ATG4B-213ENST00000460211 EVC2Q86UK5 1308 aa21.17■□□□□ 0.98
ATG4B-213ENST00000460211 ABCA3Q99758 1704 aa21.16■□□□□ 0.98
ATG4B-213ENST00000460211 SBNO1A3KN83 1393 aa21.16■□□□□ 0.98
ATG4B-213ENST00000460211 SF3B2Q13435 895 aaKnown RBP21.16■□□□□ 0.98
ATG4B-213ENST00000460211 VPS72Q15906 364 aa21.15■□□□□ 0.98
ATG4B-213ENST00000460211 CABP2Q9NPB3 220 aa21.14■□□□□ 0.97
ATG4B-213ENST00000460211 NWD2Q9ULI1 1742 aa21.14■□□□□ 0.97
ATG4B-213ENST00000460211 A0A0G2JS52 829 aa21.13■□□□□ 0.97
ATG4B-213ENST00000460211 MYT1Q01538 1121 aa21.13■□□□□ 0.97
ATG4B-213ENST00000460211 ATP7BP35670 1465 aa21.13■□□□□ 0.97
ATG4B-213ENST00000460211 ARHGEF10O15013 1369 aa21.12■□□□□ 0.97
ATG4B-213ENST00000460211 PLEKHG3A1L390 1219 aa21.12■□□□□ 0.97
ATG4B-213ENST00000460211 KRT27Q7Z3Y8 459 aa21.11■□□□□ 0.97
ATG4B-213ENST00000460211 QRICH2Q9H0J4 1663 aa21.1■□□□□ 0.97
ATG4B-213ENST00000460211 PAK3O75914 559 aaPredicted RBP21.1■□□□□ 0.97
ATG4B-213ENST00000460211 FAM83GA6ND36 823 aa21.09■□□□□ 0.97
ATG4B-213ENST00000460211 SLC24A1O60721 1099 aa21.09■□□□□ 0.97
ATG4B-213ENST00000460211 ACEP12821 1306 aa21.08■□□□□ 0.97
ATG4B-213ENST00000460211 ITSN1Q15811 1721 aa21.07■□□□□ 0.96
ATG4B-213ENST00000460211 ONECUT3O60422 494 aaPredicted RBP21.07■□□□□ 0.96
ATG4B-213ENST00000460211 POLR3AO14802 1390 aaPredicted RBP21.07■□□□□ 0.96
ATG4B-213ENST00000460211 SBNO2Q9Y2G9 1366 aa21.07■□□□□ 0.96
ATG4B-213ENST00000460211 PPIP5K1Q6PFW1 1433 aa21.06■□□□□ 0.96
ATG4B-213ENST00000460211 FAM98CQ17RN3 349 aaKnown RBP21.06■□□□□ 0.96
ATG4B-213ENST00000460211 CABP1Q9NZU7 370 aa21.06■□□□□ 0.96
ATG4B-213ENST00000460211 NRAPQ86VF7 1730 aa21.06■□□□□ 0.96
ATG4B-213ENST00000460211 PSDA5PKW4 1024 aaPredicted RBP21.05■□□□□ 0.96
ATG4B-213ENST00000460211 BTG4Q9NY30 223 aa21.05■□□□□ 0.96
ATG4B-213ENST00000460211 TRPM3Q9HCF6 1732 aaPredicted RBP21.04■□□□□ 0.96
ATG4B-213ENST00000460211 ST20-MTHFSA0A0A6YYL1 179 aa21.02■□□□□ 0.96
ATG4B-213ENST00000460211 BAG6P46379 1132 aa21.02■□□□□ 0.96
ATG4B-213ENST00000460211 FAM182BQ5T319 152 aa21.02■□□□□ 0.96
ATG4B-213ENST00000460211 LRP5O75197 1615 aa21.01■□□□□ 0.95
ATG4B-213ENST00000460211 ALS2Q96Q42 1657 aa21.01■□□□□ 0.95
ATG4B-213ENST00000460211 COL14A1Q05707 1796 aaKnown RBP21■□□□□ 0.95
ATG4B-213ENST00000460211 BRD4O60885 1362 aaPredicted RBP21■□□□□ 0.95
ATG4B-213ENST00000460211 ZNF692Q9BU19 519 aaPredicted RBP21■□□□□ 0.95
ATG4B-213ENST00000460211 TOPAZ1Q8N9V7 1692 aa20.99■□□□□ 0.95
ATG4B-213ENST00000460211 ABTB2Q8N961 1025 aa20.99■□□□□ 0.95
ATG4B-213ENST00000460211 PUS7Q96PZ0 661 aaKnown RBP20.99■□□□□ 0.95
ATG4B-213ENST00000460211 EN1Q05925 392 aaPredicted RBP20.97■□□□□ 0.95
ATG4B-213ENST00000460211 USP47Q96K76 1375 aa20.97■□□□□ 0.95
ATG4B-213ENST00000460211 RGPD1P0DJD0 1748 aa20.96■□□□□ 0.95
ATG4B-213ENST00000460211 TMC1Q8TDI8 760 aa20.96■□□□□ 0.95
ATG4B-213ENST00000460211 NLRP13Q86W25 1043 aa20.95■□□□□ 0.94
ATG4B-213ENST00000460211 TESK2Q96S53 571 aa20.95■□□□□ 0.94
ATG4B-213ENST00000460211 CRYBG1Q9Y4K1 1723 aa20.95■□□□□ 0.94
ATG4B-213ENST00000460211 TMF1P82094 1093 aa20.94■□□□□ 0.94
ATG4B-213ENST00000460211 NUTM2GQ5VZR2 741 aa20.94■□□□□ 0.94
ATG4B-213ENST00000460211 SPATA31A5Q5VU36 1347 aa20.94■□□□□ 0.94
ATG4B-213ENST00000460211 SPATA31A7Q8IWB4 1347 aa20.94■□□□□ 0.94
ATG4B-213ENST00000460211 PRDM11Q9NQV5 511 aa20.93■□□□□ 0.94
ATG4B-213ENST00000460211 USP6P35125 1406 aa20.93■□□□□ 0.94
ATG4B-213ENST00000460211 HDGFL2Q7Z4V5 671 aaPredicted RBP20.92■□□□□ 0.94
ATG4B-213ENST00000460211 THSD7AQ9UPZ6 1657 aa20.92■□□□□ 0.94
ATG4B-213ENST00000460211 R3HDM1Q15032 1099 aaKnown RBP20.91■□□□□ 0.94
ATG4B-213ENST00000460211 CDCA8Q53HL2 280 aa20.91■□□□□ 0.94
ATG4B-213ENST00000460211 TNS1Q9HBL0 1735 aaKnown RBP20.9■□□□□ 0.94
ATG4B-213ENST00000460211 NLRP6P59044 892 aa20.9■□□□□ 0.94
ATG4B-213ENST00000460211 TERF2IPQ9NYB0 399 aa20.9■□□□□ 0.94
ATG4B-213ENST00000460211 KTN1Q86UP2 1357 aaKnown RBP20.89■□□□□ 0.93
ATG4B-213ENST00000460211 CHRNA2Q15822 529 aa20.89■□□□□ 0.93
ATG4B-213ENST00000460211 TTC21AQ8NDW8 1320 aa20.88■□□□□ 0.93
ATG4B-213ENST00000460211 EZH2Q15910 746 aaKnown RBP20.88■□□□□ 0.93
ATG4B-213ENST00000460211 SLC12A5Q9H2X9 1139 aa20.88■□□□□ 0.93
ATG4B-213ENST00000460211 STRN4Q9NRL3 753 aa20.88■□□□□ 0.93
ATG4B-213ENST00000460211 CPSF1Q10570 1443 aaKnown RBP20.87■□□□□ 0.93
ATG4B-213ENST00000460211 KIAA0232Q92628 1395 aa20.87■□□□□ 0.93
ATG4B-213ENST00000460211 NINLQ9Y2I6 1382 aa20.87■□□□□ 0.93
ATG4B-213ENST00000460211 TTC21BQ7Z4L5 1316 aa20.87■□□□□ 0.93
ATG4B-213ENST00000460211 ZC3H6P61129 1189 aaKnown RBP20.87■□□□□ 0.93
ATG4B-213ENST00000460211 PHRF1Q9P1Y6 1649 aaKnown RBP20.86■□□□□ 0.93
ATG4B-213ENST00000460211 SSH2Q76I76 1423 aa20.86■□□□□ 0.93
ATG4B-213ENST00000460211 USP19O94966 1318 aa20.85■□□□□ 0.93
ATG4B-213ENST00000460211 SPATA31A1Q5TZJ5 1347 aa20.85■□□□□ 0.93
ATG4B-213ENST00000460211 TRIM37O94972 964 aa20.85■□□□□ 0.93
ATG4B-213ENST00000460211 GCP02774 474 aa20.85■□□□□ 0.93
ATG4B-213ENST00000460211 EIF4G2P78344 907 aaKnown RBP eCLIP20.85■□□□□ 0.93
ATG4B-213ENST00000460211 USP35Q9P2H5 1018 aa20.85■□□□□ 0.93
ATG4B-213ENST00000460211 DISP2A7MBM2 1401 aa20.84■□□□□ 0.93
ATG4B-213ENST00000460211 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.82■□□□□ 0.92
ATG4B-213ENST00000460211 KCNH5Q8NCM2 988 aa20.82■□□□□ 0.92
ATG4B-213ENST00000460211 FAM196AQ6ZSG2 479 aa20.81■□□□□ 0.92
ATG4B-213ENST00000460211 APBA3O96018 575 aa20.8■□□□□ 0.92
ATG4B-213ENST00000460211 CAMKK2Q96RR4 588 aa20.8■□□□□ 0.92
ATG4B-213ENST00000460211 CPDO75976 1380 aa20.8■□□□□ 0.92
ATG4B-213ENST00000460211 EVA1CP58658 441 aa20.79■□□□□ 0.92
ATG4B-213ENST00000460211 AKAP12Q02952 1782 aa20.78■□□□□ 0.92
ATG4B-213ENST00000460211 CD163L1Q9NR16 1453 aa20.78■□□□□ 0.92
ATG4B-213ENST00000460211 A0A1W2PP64 1363 aa20.78■□□□□ 0.92
ATG4B-213ENST00000460211 EDC4Q6P2E9 1401 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms