RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 FAM13BQ9NYF5 915 aa13.05□□□□□ -0.32
AMBRA1-202ENST00000458649 RILPL2Q969X0 211 aa13.05□□□□□ -0.32
AMBRA1-202ENST00000458649 ERICH2A1L162 156 aa13.04□□□□□ -0.32
AMBRA1-202ENST00000458649 ADAMTS12P58397 1594 aa13.04□□□□□ -0.32
AMBRA1-202ENST00000458649 MTERF4Q7Z6M4 381 aaKnown RBP13.04□□□□□ -0.32
AMBRA1-202ENST00000458649 RAD21O60216 631 aa13.03□□□□□ -0.32
AMBRA1-202ENST00000458649 SF3A1Q15459 793 aaKnown RBP13.03□□□□□ -0.32
AMBRA1-202ENST00000458649 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
AMBRA1-202ENST00000458649 CCDC61Q9Y6R9 512 aa13.03□□□□□ -0.32
AMBRA1-202ENST00000458649 TRIM29Q14134 588 aa13.03□□□□□ -0.32
AMBRA1-202ENST00000458649 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
AMBRA1-202ENST00000458649 FAM184AQ8NB25 1140 aa13.03□□□□□ -0.32
AMBRA1-202ENST00000458649 DHX16O60231 1041 aaKnown RBP13.02□□□□□ -0.32
AMBRA1-202ENST00000458649 GNL3LQ9NVN8 582 aaKnown RBP13.02□□□□□ -0.32
AMBRA1-202ENST00000458649 TOM1O60784 492 aa13.02□□□□□ -0.33
AMBRA1-202ENST00000458649 ZNF530Q6P9A1 599 aaPredicted RBP13.02□□□□□ -0.33
AMBRA1-202ENST00000458649 FANCAO15360 1455 aa13.02□□□□□ -0.33
AMBRA1-202ENST00000458649 REC8O95072 547 aa13.02□□□□□ -0.33
AMBRA1-202ENST00000458649 GNAI3P08754 354 aa13.02□□□□□ -0.33
AMBRA1-202ENST00000458649 AIMP1Q12904 312 aaKnown RBP13.02□□□□□ -0.33
AMBRA1-202ENST00000458649 PPP1R1BQ9UD71 204 aaPredicted RBP13.02□□□□□ -0.33
AMBRA1-202ENST00000458649 UBTFL1P0CB47 393 aaPredicted RBP13.02□□□□□ -0.33
AMBRA1-202ENST00000458649 ATP6V1DQ9Y5K8 247 aa13.01□□□□□ -0.33
AMBRA1-202ENST00000458649 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
AMBRA1-202ENST00000458649 CADPS2Q86UW7 1296 aa13.01□□□□□ -0.33
AMBRA1-202ENST00000458649 DDX54Q8TDD1 881 aaKnown RBP13.01□□□□□ -0.33
AMBRA1-202ENST00000458649 NOC3LQ8WTT2 800 aaKnown RBP13.01□□□□□ -0.33
AMBRA1-202ENST00000458649 TBC1D2BQ9UPU7 963 aa13.01□□□□□ -0.33
AMBRA1-202ENST00000458649 MAPKBP1O60336 1514 aa13.01□□□□□ -0.33
AMBRA1-202ENST00000458649 H3BQV1 296 aa13.01□□□□□ -0.33
AMBRA1-202ENST00000458649 IFFO2Q5TF58 517 aa13.01□□□□□ -0.33
AMBRA1-202ENST00000458649 PANK1Q8TE04 598 aa13.01□□□□□ -0.33
AMBRA1-202ENST00000458649 PRKAR2BP31323 418 aa13□□□□□ -0.33
AMBRA1-202ENST00000458649 CCDC47Q96A33 483 aaKnown RBP13□□□□□ -0.33
AMBRA1-202ENST00000458649 PDZRN4Q6ZMN7 1036 aaPredicted RBP13□□□□□ -0.33
AMBRA1-202ENST00000458649 CEP89Q96ST8 783 aa13□□□□□ -0.33
AMBRA1-202ENST00000458649 KIAA0556O60303 1618 aa13□□□□□ -0.33
AMBRA1-202ENST00000458649 DHX29Q7Z478 1369 aaKnown RBP12.99□□□□□ -0.33
AMBRA1-202ENST00000458649 TCOF1Q13428 1488 aaKnown RBP12.99□□□□□ -0.33
AMBRA1-202ENST00000458649 CPLX1O14810 134 aa12.98□□□□□ -0.33
AMBRA1-202ENST00000458649 PLCH2O75038 1416 aa12.98□□□□□ -0.33
AMBRA1-202ENST00000458649 CCDC43Q96MW1 224 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-202ENST00000458649 WDR62O43379 1518 aa12.98□□□□□ -0.33
AMBRA1-202ENST00000458649 SLC3A2P08195 630 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-202ENST00000458649 CCAR1Q8IX12 1150 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-202ENST00000458649 CFAP43Q8NDM7 1665 aa12.98□□□□□ -0.33
AMBRA1-202ENST00000458649 FAM43AQ8N2R8 423 aa12.98□□□□□ -0.33
AMBRA1-202ENST00000458649 NUDT16Q96DE0 195 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-202ENST00000458649 NEUROD6Q96NK8 337 aa12.98□□□□□ -0.33
AMBRA1-202ENST00000458649 NGLY1Q96IV0 654 aa12.97□□□□□ -0.33
AMBRA1-202ENST00000458649 ITSN2Q9NZM3 1697 aa12.97□□□□□ -0.33
AMBRA1-202ENST00000458649 ADGRF5Q8IZF2 1346 aa12.97□□□□□ -0.33
AMBRA1-202ENST00000458649 ERC1Q8IUD2 1116 aa12.97□□□□□ -0.33
AMBRA1-202ENST00000458649 ZNF652Q9Y2D9 606 aa12.97□□□□□ -0.33
AMBRA1-202ENST00000458649 KIF21AQ7Z4S6 1674 aa12.97□□□□□ -0.33
AMBRA1-202ENST00000458649 DDX11L8A8MPP1 907 aa12.97□□□□□ -0.33
AMBRA1-202ENST00000458649 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
AMBRA1-202ENST00000458649 PHF8Q9UPP1 1060 aa12.96□□□□□ -0.33
AMBRA1-202ENST00000458649 STARD3NLO95772 234 aa12.96□□□□□ -0.33
AMBRA1-202ENST00000458649 EXOSC9Q06265 439 aaKnown RBP12.96□□□□□ -0.33
AMBRA1-202ENST00000458649 CCDC27Q2M243 656 aa12.96□□□□□ -0.33
AMBRA1-202ENST00000458649 RALYLQ86SE5 291 aaKnown RBP12.96□□□□□ -0.33
AMBRA1-202ENST00000458649 MSH6P52701 1360 aa12.96□□□□□ -0.33
AMBRA1-202ENST00000458649 TPM2P07951 284 aa12.96□□□□□ -0.33
AMBRA1-202ENST00000458649 TEX35Q5T0J7 233 aa12.96□□□□□ -0.33
AMBRA1-202ENST00000458649 TNRQ92752 1358 aa12.96□□□□□ -0.34
AMBRA1-202ENST00000458649 PHF14O94880 888 aa12.96□□□□□ -0.34
AMBRA1-202ENST00000458649 WDR63Q8IWG1 891 aa12.96□□□□□ -0.34
AMBRA1-202ENST00000458649 CCDC66A2RUB6 948 aa12.95□□□□□ -0.34
AMBRA1-202ENST00000458649 NSD3Q9BZ95 1437 aa12.95□□□□□ -0.34
AMBRA1-202ENST00000458649 GPS2Q13227 327 aa12.95□□□□□ -0.34
AMBRA1-202ENST00000458649 IDI1Q13907 227 aa12.95□□□□□ -0.34
AMBRA1-202ENST00000458649 NOM1Q5C9Z4 860 aaKnown RBP12.95□□□□□ -0.34
AMBRA1-202ENST00000458649 SULT6B1Q6IMI4 303 aa12.95□□□□□ -0.34
AMBRA1-202ENST00000458649 NFXL1Q6ZNB6 911 aa12.95□□□□□ -0.34
AMBRA1-202ENST00000458649 AMOTL2Q9Y2J4 779 aa12.95□□□□□ -0.34
AMBRA1-202ENST00000458649 NINLQ9Y2I6 1382 aa12.95□□□□□ -0.34
AMBRA1-202ENST00000458649 FAM135AQ9P2D6 1515 aa12.95□□□□□ -0.34
AMBRA1-202ENST00000458649 CLASRPQ8N2M8 674 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-202ENST00000458649 HDGFL1Q5TGJ6 251 aa12.94□□□□□ -0.34
AMBRA1-202ENST00000458649 SART3Q15020 963 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-202ENST00000458649 WASHC4Q2M389 1173 aa12.94□□□□□ -0.34
AMBRA1-202ENST00000458649 CNNM1Q9NRU3 951 aa12.94□□□□□ -0.34
AMBRA1-202ENST00000458649 SCAF11Q99590 1463 aaKnown RBP12.93□□□□□ -0.34
AMBRA1-202ENST00000458649 ZC3H6P61129 1189 aaKnown RBP12.93□□□□□ -0.34
AMBRA1-202ENST00000458649 SAFBQ15424 915 aaKnown RBP eCLIP12.93□□□□□ -0.34
AMBRA1-202ENST00000458649 EIF4G3O43432 1585 aaKnown RBP12.93□□□□□ -0.34
AMBRA1-202ENST00000458649 FAM177BA6PVY3 158 aa12.93□□□□□ -0.34
AMBRA1-202ENST00000458649 WDHD1O75717 1129 aaPredicted RBP12.93□□□□□ -0.34
AMBRA1-202ENST00000458649 AMOTQ4VCS5 1084 aa12.93□□□□□ -0.34
AMBRA1-202ENST00000458649 HIP1O00291 1037 aa12.92□□□□□ -0.34
AMBRA1-202ENST00000458649 CT47B1P0C2W7 299 aaPredicted RBP12.92□□□□□ -0.34
AMBRA1-202ENST00000458649 SLC4A3P48751 1232 aa12.92□□□□□ -0.34
AMBRA1-202ENST00000458649 BCAR3O75815 825 aa12.92□□□□□ -0.34
AMBRA1-202ENST00000458649 XBP1P17861 261 aa12.92□□□□□ -0.34
AMBRA1-202ENST00000458649 TSR2Q969E8 191 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-202ENST00000458649 LNPKQ9C0E8 428 aa12.92□□□□□ -0.34
AMBRA1-202ENST00000458649 DUOX2Q9NRD8 1548 aa12.92□□□□□ -0.34
AMBRA1-202ENST00000458649 TPD52L1Q16890 204 aaPredicted RBP12.92□□□□□ -0.34
AMBRA1-202ENST00000458649 ANO2Q9NQ90 1003 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms