RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 KRT27Q7Z3Y8 459 aa16.34■□□□□ 0.21
RPSA-204ENST00000458478 CCDC61Q9Y6R9 512 aa16.34■□□□□ 0.21
RPSA-204ENST00000458478 ATP7BP35670 1465 aa16.34■□□□□ 0.21
RPSA-204ENST00000458478 FAM98CQ17RN3 349 aaKnown RBP16.33■□□□□ 0.2
RPSA-204ENST00000458478 NBPF8Q3BBV2 869 aa16.33■□□□□ 0.2
RPSA-204ENST00000458478 BLMP54132 1417 aaPredicted RBP16.33■□□□□ 0.2
RPSA-204ENST00000458478 SRCAPQ6ZRS2 3230 aa16.33■□□□□ 0.2
RPSA-204ENST00000458478 KIAA1210Q9ULL0 1709 aa16.33■□□□□ 0.2
RPSA-204ENST00000458478 PLEKHG3A1L390 1219 aa16.32■□□□□ 0.2
RPSA-204ENST00000458478 ACEP12821 1306 aa16.32■□□□□ 0.2
RPSA-204ENST00000458478 DEFB132Q7Z7B7 95 aa16.32■□□□□ 0.2
RPSA-204ENST00000458478 COL14A1Q05707 1796 aaKnown RBP16.31■□□□□ 0.2
RPSA-204ENST00000458478 NRAPQ86VF7 1730 aa16.31■□□□□ 0.2
RPSA-204ENST00000458478 NUTM2GQ5VZR2 741 aa16.31■□□□□ 0.2
RPSA-204ENST00000458478 ITSN1Q15811 1721 aa16.31■□□□□ 0.2
RPSA-204ENST00000458478 POLR3AO14802 1390 aaPredicted RBP16.3■□□□□ 0.2
RPSA-204ENST00000458478 SPATA31A5Q5VU36 1347 aa16.3■□□□□ 0.2
RPSA-204ENST00000458478 SPATA31A7Q8IWB4 1347 aa16.3■□□□□ 0.2
RPSA-204ENST00000458478 A0A0G2JS52 829 aa16.3■□□□□ 0.2
RPSA-204ENST00000458478 MYT1Q01538 1121 aa16.3■□□□□ 0.2
RPSA-204ENST00000458478 PRDM11Q9NQV5 511 aa16.3■□□□□ 0.2
RPSA-204ENST00000458478 CRYBG1Q9Y4K1 1723 aa16.3■□□□□ 0.2
RPSA-204ENST00000458478 ZC3H6P61129 1189 aaKnown RBP16.29■□□□□ 0.2
RPSA-204ENST00000458478 SF3B2Q13435 895 aaKnown RBP16.29■□□□□ 0.2
RPSA-204ENST00000458478 CHRNA2Q15822 529 aa16.29■□□□□ 0.2
RPSA-204ENST00000458478 L3MBTL2Q969R5 705 aa16.29■□□□□ 0.2
RPSA-204ENST00000458478 KIAA0232Q92628 1395 aa16.28■□□□□ 0.2
RPSA-204ENST00000458478 CENPJQ9HC77 1338 aaPredicted RBP16.27■□□□□ 0.2
RPSA-204ENST00000458478 SRPK2P78362 688 aaKnown RBP16.27■□□□□ 0.2
RPSA-204ENST00000458478 ABTB2Q8N961 1025 aa16.27■□□□□ 0.2
RPSA-204ENST00000458478 SIN3AQ96ST3 1273 aa16.27■□□□□ 0.2
RPSA-204ENST00000458478 CABP2Q9NPB3 220 aa16.27■□□□□ 0.2
RPSA-204ENST00000458478 FAM182BQ5T319 152 aa16.26■□□□□ 0.19
RPSA-204ENST00000458478 TOPAZ1Q8N9V7 1692 aa16.26■□□□□ 0.19
RPSA-204ENST00000458478 STRN4Q9NRL3 753 aa16.25■□□□□ 0.19
RPSA-204ENST00000458478 SPATA31A1Q5TZJ5 1347 aa16.24■□□□□ 0.19
RPSA-204ENST00000458478 PPIP5K1Q6PFW1 1433 aa16.23■□□□□ 0.19
RPSA-204ENST00000458478 EVA1CP58658 441 aa16.23■□□□□ 0.19
RPSA-204ENST00000458478 NEUROD1Q13562 356 aa16.23■□□□□ 0.19
RPSA-204ENST00000458478 CABP1Q9NZU7 370 aa16.23■□□□□ 0.19
RPSA-204ENST00000458478 PHRF1Q9P1Y6 1649 aaKnown RBP16.23■□□□□ 0.19
RPSA-204ENST00000458478 GCP02774 474 aa16.21■□□□□ 0.19
RPSA-204ENST00000458478 BAG6P46379 1132 aa16.21■□□□□ 0.19
RPSA-204ENST00000458478 NLRP13Q86W25 1043 aa16.21■□□□□ 0.19
RPSA-204ENST00000458478 USP35Q9P2H5 1018 aa16.2■□□□□ 0.18
RPSA-204ENST00000458478 USP19O94966 1318 aa16.19■□□□□ 0.18
RPSA-204ENST00000458478 THSD7AQ9UPZ6 1657 aa16.19■□□□□ 0.18
RPSA-204ENST00000458478 EN1Q05925 392 aaPredicted RBP16.19■□□□□ 0.18
RPSA-204ENST00000458478 LARP1Q6PKG0 1096 aaKnown RBP16.19■□□□□ 0.18
RPSA-204ENST00000458478 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
RPSA-204ENST00000458478 CAMTA1Q9Y6Y1 1673 aa16.18■□□□□ 0.18
RPSA-204ENST00000458478 CPDO75976 1380 aa16.18■□□□□ 0.18
RPSA-204ENST00000458478 SSH2Q76I76 1423 aa16.18■□□□□ 0.18
RPSA-204ENST00000458478 BRD4O60885 1362 aaPredicted RBP16.17■□□□□ 0.18
RPSA-204ENST00000458478 NLRP6P59044 892 aa16.17■□□□□ 0.18
RPSA-204ENST00000458478 BARGINQ6ZT62 677 aa16.17■□□□□ 0.18
RPSA-204ENST00000458478 NRKQ7Z2Y5 1582 aa16.17■□□□□ 0.18
RPSA-204ENST00000458478 EVC2Q86UK5 1308 aa16.17■□□□□ 0.18
RPSA-204ENST00000458478 FAM196AQ6ZSG2 479 aa16.16■□□□□ 0.18
RPSA-204ENST00000458478 TRPM1Q7Z4N2 1603 aa16.16■□□□□ 0.18
RPSA-204ENST00000458478 PSDA5PKW4 1024 aaPredicted RBP16.15■□□□□ 0.18
RPSA-204ENST00000458478 TRIM37O94972 964 aa16.15■□□□□ 0.18
RPSA-204ENST00000458478 USP6P35125 1406 aa16.15■□□□□ 0.18
RPSA-204ENST00000458478 TCP11L2Q8N4U5 519 aa16.15■□□□□ 0.18
RPSA-204ENST00000458478 ROCK2O75116 1388 aaKnown RBP16.14■□□□□ 0.17
RPSA-204ENST00000458478 PDE3BQ13370 1112 aa16.14■□□□□ 0.17
RPSA-204ENST00000458478 LMO7Q8WWI1 1683 aa16.14■□□□□ 0.17
RPSA-204ENST00000458478 RGPD1P0DJD0 1748 aa16.14■□□□□ 0.17
RPSA-204ENST00000458478 ZBTB7CA1YPR0 619 aa16.13■□□□□ 0.17
RPSA-204ENST00000458478 EZH2Q15910 746 aaKnown RBP16.13■□□□□ 0.17
RPSA-204ENST00000458478 ZNF692Q9BU19 519 aaPredicted RBP16.13■□□□□ 0.17
RPSA-204ENST00000458478 THRAP3Q9Y2W1 955 aaKnown RBP16.13■□□□□ 0.17
RPSA-204ENST00000458478 CAMKK2Q96RR4 588 aa16.12■□□□□ 0.17
RPSA-204ENST00000458478 APBA3O96018 575 aa16.11■□□□□ 0.17
RPSA-204ENST00000458478 DISP2A7MBM2 1401 aa16.11■□□□□ 0.17
RPSA-204ENST00000458478 COL5A2P05997 1499 aaPredicted RBP16.1■□□□□ 0.17
RPSA-204ENST00000458478 AXIN2Q9Y2T1 843 aa16.1■□□□□ 0.17
RPSA-204ENST00000458478 TTC21BQ7Z4L5 1316 aa16.1■□□□□ 0.17
RPSA-204ENST00000458478 TNS1Q9HBL0 1735 aaKnown RBP16.1■□□□□ 0.17
RPSA-204ENST00000458478 AATKQ6ZMQ8 1374 aa16.1■□□□□ 0.17
RPSA-204ENST00000458478 SLIT3O75094 1523 aa16.09■□□□□ 0.17
RPSA-204ENST00000458478 R3HDM1Q15032 1099 aaKnown RBP16.08■□□□□ 0.16
RPSA-204ENST00000458478 PIK3C2AO00443 1686 aa16.08■□□□□ 0.16
RPSA-204ENST00000458478 ARHGEF25Q86VW2 580 aa16.07■□□□□ 0.16
RPSA-204ENST00000458478 CRB1P82279 1406 aa16.07■□□□□ 0.16
RPSA-204ENST00000458478 CPSF1Q10570 1443 aaKnown RBP16.06■□□□□ 0.16
RPSA-204ENST00000458478 TOM1L2Q6ZVM7 507 aa16.06■□□□□ 0.16
RPSA-204ENST00000458478 KCNH5Q8NCM2 988 aa16.06■□□□□ 0.16
RPSA-204ENST00000458478 CARD11Q9BXL7 1154 aa16.06■□□□□ 0.16
RPSA-204ENST00000458478 COL18A1P39060 1754 aa16.05■□□□□ 0.16
RPSA-204ENST00000458478 TTC21AQ8NDW8 1320 aa16.05■□□□□ 0.16
RPSA-204ENST00000458478 SOX12O15370 315 aa16.05■□□□□ 0.16
RPSA-204ENST00000458478 KTN1Q86UP2 1357 aaKnown RBP16.04■□□□□ 0.16
RPSA-204ENST00000458478 AKAP12Q02952 1782 aa16.04■□□□□ 0.16
RPSA-204ENST00000458478 LRP5O75197 1615 aa16.04■□□□□ 0.16
RPSA-204ENST00000458478 WDR17Q8IZU2 1322 aa16.03■□□□□ 0.16
RPSA-204ENST00000458478 PARP4Q9UKK3 1724 aaKnown RBP16.02■□□□□ 0.16
RPSA-204ENST00000458478 PARD3Q8TEW0 1356 aa16.02■□□□□ 0.16
RPSA-204ENST00000458478 DDB1Q16531 1140 aa16.02■□□□□ 0.16
RPSA-204ENST00000458478 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms