RNA–Protein interactions for RNA: ENST00000458438.2

LYRM4-203, Transcript of LYR motif containing 4, humanhuman

TSL 2

Gene LYRM4, Length 941 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-203ENST00000458438 ATRNO75882 1429 aa18.24■□□□□ 0.51
LYRM4-203ENST00000458438 SLIT2O94813 1529 aa18.24■□□□□ 0.51
LYRM4-203ENST00000458438 TRPC5Q9UL62 973 aaPredicted RBP18.24■□□□□ 0.51
LYRM4-203ENST00000458438 RALGAPBQ86X10 1494 aa18.24■□□□□ 0.51
LYRM4-203ENST00000458438 PPIP5K1Q6PFW1 1433 aa18.23■□□□□ 0.51
LYRM4-203ENST00000458438 NWD2Q9ULI1 1742 aa18.23■□□□□ 0.51
LYRM4-203ENST00000458438 RGS12O14924 1447 aa18.23■□□□□ 0.51
LYRM4-203ENST00000458438 EVC2Q86UK5 1308 aa18.22■□□□□ 0.51
LYRM4-203ENST00000458438 PHRF1Q9P1Y6 1649 aaKnown RBP18.21■□□□□ 0.51
LYRM4-203ENST00000458438 CARD11Q9BXL7 1154 aa18.21■□□□□ 0.51
LYRM4-203ENST00000458438 PCGF6Q9BYE7 350 aa18.2■□□□□ 0.5
LYRM4-203ENST00000458438 UNC5CLQ8IV45 518 aa18.19■□□□□ 0.5
LYRM4-203ENST00000458438 NRAPQ86VF7 1730 aa18.18■□□□□ 0.5
LYRM4-203ENST00000458438 COL14A1Q05707 1796 aaKnown RBP18.18■□□□□ 0.5
LYRM4-203ENST00000458438 CABP1Q9NZU7 370 aa18.18■□□□□ 0.5
LYRM4-203ENST00000458438 GLI3P10071 1580 aa18.17■□□□□ 0.5
LYRM4-203ENST00000458438 FAM83GA6ND36 823 aa18.17■□□□□ 0.5
LYRM4-203ENST00000458438 NUTM2GQ5VZR2 741 aa18.17■□□□□ 0.5
LYRM4-203ENST00000458438 GJD4Q96KN9 370 aaPredicted RBP18.17■□□□□ 0.5
LYRM4-203ENST00000458438 AKAP12Q02952 1782 aa18.17■□□□□ 0.5
LYRM4-203ENST00000458438 SBNO2Q9Y2G9 1366 aa18.16■□□□□ 0.5
LYRM4-203ENST00000458438 ABTB2Q8N961 1025 aa18.14■□□□□ 0.49
LYRM4-203ENST00000458438 UPF1Q92900 1129 aaKnown RBP eCLIP18.14■□□□□ 0.49
LYRM4-203ENST00000458438 USP6P35125 1406 aa18.13■□□□□ 0.49
LYRM4-203ENST00000458438 VPS72Q15906 364 aa18.12■□□□□ 0.49
LYRM4-203ENST00000458438 BTG4Q9NY30 223 aa18.12■□□□□ 0.49
LYRM4-203ENST00000458438 BRD4O60885 1362 aaPredicted RBP18.12■□□□□ 0.49
LYRM4-203ENST00000458438 NRKQ7Z2Y5 1582 aa18.12■□□□□ 0.49
LYRM4-203ENST00000458438 BRWD3Q6RI45 1802 aa18.12■□□□□ 0.49
LYRM4-203ENST00000458438 CLSPNQ9HAW4 1339 aa18.11■□□□□ 0.49
LYRM4-203ENST00000458438 PIK3C2AO00443 1686 aa18.1■□□□□ 0.49
LYRM4-203ENST00000458438 SSH2Q76I76 1423 aa18.1■□□□□ 0.49
LYRM4-203ENST00000458438 ATAD2Q6PL18 1390 aa18.1■□□□□ 0.49
LYRM4-203ENST00000458438 KIAA0232Q92628 1395 aa18.1■□□□□ 0.49
LYRM4-203ENST00000458438 PRDM11Q9NQV5 511 aa18.1■□□□□ 0.49
LYRM4-203ENST00000458438 MON2Q7Z3U7 1717 aa18.09■□□□□ 0.49
LYRM4-203ENST00000458438 ZC3H6P61129 1189 aaKnown RBP18.09■□□□□ 0.49
LYRM4-203ENST00000458438 NLRP13Q86W25 1043 aa18.09■□□□□ 0.49
LYRM4-203ENST00000458438 CCDC9Q9Y3X0 531 aaKnown RBP18.09■□□□□ 0.49
LYRM4-203ENST00000458438 USP19O94966 1318 aa18.08■□□□□ 0.49
LYRM4-203ENST00000458438 ZNF692Q9BU19 519 aaPredicted RBP18.08■□□□□ 0.48
LYRM4-203ENST00000458438 CPSF1Q10570 1443 aaKnown RBP18.07■□□□□ 0.48
LYRM4-203ENST00000458438 ST20-MTHFSA0A0A6YYL1 179 aa18.07■□□□□ 0.48
LYRM4-203ENST00000458438 CHRNA2Q15822 529 aa18.07■□□□□ 0.48
LYRM4-203ENST00000458438 TIMELESSQ9UNS1 1208 aa18.07■□□□□ 0.48
LYRM4-203ENST00000458438 TESK2Q96S53 571 aa18.06■□□□□ 0.48
LYRM4-203ENST00000458438 TTC21BQ7Z4L5 1316 aa18.05■□□□□ 0.48
LYRM4-203ENST00000458438 SLIT3O75094 1523 aa18.05■□□□□ 0.48
LYRM4-203ENST00000458438 GCP02774 474 aa18.05■□□□□ 0.48
LYRM4-203ENST00000458438 LMO7Q8WWI1 1683 aa18.05■□□□□ 0.48
LYRM4-203ENST00000458438 KTN1Q86UP2 1357 aaKnown RBP18.04■□□□□ 0.48
LYRM4-203ENST00000458438 CD163L1Q9NR16 1453 aa18.04■□□□□ 0.48
LYRM4-203ENST00000458438 ONECUT3O60422 494 aaPredicted RBP18.04■□□□□ 0.48
LYRM4-203ENST00000458438 NLRP6P59044 892 aa18.04■□□□□ 0.48
LYRM4-203ENST00000458438 CPDO75976 1380 aa18.04■□□□□ 0.48
LYRM4-203ENST00000458438 SEPT12Q8IYM1 358 aa18.03■□□□□ 0.48
LYRM4-203ENST00000458438 CAMTA1Q9Y6Y1 1673 aa18.03■□□□□ 0.48
LYRM4-203ENST00000458438 CCER1Q8TC90 406 aaPredicted RBP18.02■□□□□ 0.48
LYRM4-203ENST00000458438 TMC1Q8TDI8 760 aa18.02■□□□□ 0.48
LYRM4-203ENST00000458438 PUS7Q96PZ0 661 aaKnown RBP18.02■□□□□ 0.48
LYRM4-203ENST00000458438 SLC12A5Q9H2X9 1139 aa18.02■□□□□ 0.48
LYRM4-203ENST00000458438 USP47Q96K76 1375 aa18.02■□□□□ 0.47
LYRM4-203ENST00000458438 SPATA31A5Q5VU36 1347 aa18.01■□□□□ 0.47
LYRM4-203ENST00000458438 SPATA31A7Q8IWB4 1347 aa18.01■□□□□ 0.47
LYRM4-203ENST00000458438 TTC21AQ8NDW8 1320 aa18.01■□□□□ 0.47
LYRM4-203ENST00000458438 FAM98CQ17RN3 349 aaKnown RBP18■□□□□ 0.47
LYRM4-203ENST00000458438 STRN4Q9NRL3 753 aa18■□□□□ 0.47
LYRM4-203ENST00000458438 COL18A1P39060 1754 aa17.99■□□□□ 0.47
LYRM4-203ENST00000458438 USP54Q70EL1 1684 aa17.99■□□□□ 0.47
LYRM4-203ENST00000458438 THSD7AQ9UPZ6 1657 aa17.99■□□□□ 0.47
LYRM4-203ENST00000458438 SLC24A1O60721 1099 aa17.98■□□□□ 0.47
LYRM4-203ENST00000458438 EVA1CP58658 441 aa17.98■□□□□ 0.47
LYRM4-203ENST00000458438 RGPD5Q99666 1765 aa17.98■□□□□ 0.47
LYRM4-203ENST00000458438 SPATA31A1Q5TZJ5 1347 aa17.98■□□□□ 0.47
LYRM4-203ENST00000458438 A0A0G2JS52 829 aa17.97■□□□□ 0.47
LYRM4-203ENST00000458438 ZBTB7CA1YPR0 619 aa17.97■□□□□ 0.47
LYRM4-203ENST00000458438 MYT1Q01538 1121 aa17.97■□□□□ 0.47
LYRM4-203ENST00000458438 HDGFL2Q7Z4V5 671 aaPredicted RBP17.97■□□□□ 0.47
LYRM4-203ENST00000458438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.97■□□□□ 0.47
LYRM4-203ENST00000458438 A0A1W2PP64 1363 aa17.96■□□□□ 0.47
LYRM4-203ENST00000458438 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
LYRM4-203ENST00000458438 ZRANB1Q9UGI0 708 aa17.96■□□□□ 0.47
LYRM4-203ENST00000458438 EP400Q96L91 3159 aa17.96■□□□□ 0.47
LYRM4-203ENST00000458438 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
LYRM4-203ENST00000458438 LARP1Q6PKG0 1096 aaKnown RBP17.95■□□□□ 0.46
LYRM4-203ENST00000458438 KRT27Q7Z3Y8 459 aa17.95■□□□□ 0.46
LYRM4-203ENST00000458438 EDC4Q6P2E9 1401 aaKnown RBP17.95■□□□□ 0.46
LYRM4-203ENST00000458438 AATKQ6ZMQ8 1374 aa17.94■□□□□ 0.46
LYRM4-203ENST00000458438 NFAT5O94916 1531 aa17.94■□□□□ 0.46
LYRM4-203ENST00000458438 SOX12O15370 315 aa17.94■□□□□ 0.46
LYRM4-203ENST00000458438 TMF1P82094 1093 aa17.94■□□□□ 0.46
LYRM4-203ENST00000458438 NME9Q86XW9 330 aa17.94■□□□□ 0.46
LYRM4-203ENST00000458438 KCNH5Q8NCM2 988 aa17.94■□□□□ 0.46
LYRM4-203ENST00000458438 USP31Q70CQ4 1352 aa17.93■□□□□ 0.46
LYRM4-203ENST00000458438 NINLQ9Y2I6 1382 aa17.93■□□□□ 0.46
LYRM4-203ENST00000458438 USP35Q9P2H5 1018 aa17.93■□□□□ 0.46
LYRM4-203ENST00000458438 LTN1O94822 1766 aa17.92■□□□□ 0.46
LYRM4-203ENST00000458438 ARHGEF25Q86VW2 580 aa17.92■□□□□ 0.46
LYRM4-203ENST00000458438 CCDC125Q86Z20 511 aa17.92■□□□□ 0.46
LYRM4-203ENST00000458438 AXIN2Q9Y2T1 843 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms