RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 NAP1L2Q9ULW6 460 aaPredicted RBP17.52■□□□□ 0.4
TOP3B-214ENST00000457270 BMP2KLQ5H9B9 411 aa17.52■□□□□ 0.39
TOP3B-214ENST00000457270 ADGRL1O94910 1474 aa17.52■□□□□ 0.39
TOP3B-214ENST00000457270 KIF16BQ96L93 1317 aa17.51■□□□□ 0.39
TOP3B-214ENST00000457270 TNNT2P45379 298 aaPredicted RBP17.51■□□□□ 0.39
TOP3B-214ENST00000457270 ZKSCAN5Q9Y2L8 839 aa17.51■□□□□ 0.39
TOP3B-214ENST00000457270 ADGRB2O60241 1585 aa17.5■□□□□ 0.39
TOP3B-214ENST00000457270 CD2BP2O95400 341 aaKnown RBP17.5■□□□□ 0.39
TOP3B-214ENST00000457270 TRIM27P14373 513 aa17.5■□□□□ 0.39
TOP3B-214ENST00000457270 ZNF518AQ6AHZ1 1483 aa17.49■□□□□ 0.39
TOP3B-214ENST00000457270 ZSCAN23Q3MJ62 389 aa17.49■□□□□ 0.39
TOP3B-214ENST00000457270 SASS6Q6UVJ0 657 aa17.48■□□□□ 0.39
TOP3B-214ENST00000457270 GAS2L2Q8NHY3 880 aa17.48■□□□□ 0.39
TOP3B-214ENST00000457270 ZBTB40Q9NUA8 1239 aa17.48■□□□□ 0.39
TOP3B-214ENST00000457270 MYO3AQ8NEV4 1616 aa17.48■□□□□ 0.39
TOP3B-214ENST00000457270 NEURL4Q96JN8 1562 aa17.48■□□□□ 0.39
TOP3B-214ENST00000457270 XPCQ01831 940 aaPredicted RBP17.48■□□□□ 0.39
TOP3B-214ENST00000457270 ATF7IPQ6VMQ6 1270 aa17.48■□□□□ 0.39
TOP3B-214ENST00000457270 CHMP4BQ9H444 224 aaKnown RBP17.48■□□□□ 0.39
TOP3B-214ENST00000457270 ITPRIPQ8IWB1 547 aa17.47■□□□□ 0.39
TOP3B-214ENST00000457270 PTPRTO14522 1441 aa17.47■□□□□ 0.39
TOP3B-214ENST00000457270 SBNO2Q9Y2G9 1366 aa17.47■□□□□ 0.39
TOP3B-214ENST00000457270 RBSNQ9H1K0 784 aa17.47■□□□□ 0.39
TOP3B-214ENST00000457270 USP32Q8NFA0 1604 aa17.47■□□□□ 0.39
TOP3B-214ENST00000457270 CHD1LQ86WJ1 897 aa17.46■□□□□ 0.39
TOP3B-214ENST00000457270 JPH4Q96JJ6 628 aa17.46■□□□□ 0.39
TOP3B-214ENST00000457270 SMC4Q9NTJ3 1288 aa17.46■□□□□ 0.39
TOP3B-214ENST00000457270 REREQ9P2R6 1566 aa17.46■□□□□ 0.39
TOP3B-214ENST00000457270 MORC1Q86VD1 984 aa17.46■□□□□ 0.39
TOP3B-214ENST00000457270 FOXD4L1Q9NU39 408 aa17.46■□□□□ 0.39
TOP3B-214ENST00000457270 CLTCL1P53675 1640 aa17.46■□□□□ 0.39
TOP3B-214ENST00000457270 ZSCAN20P17040 1043 aaPredicted RBP17.45■□□□□ 0.38
TOP3B-214ENST00000457270 NUCB2P80303 420 aa17.45■□□□□ 0.38
TOP3B-214ENST00000457270 PPP4R3BQ5MIZ7 849 aa17.45■□□□□ 0.38
TOP3B-214ENST00000457270 LMBRD1Q9NUN5 540 aa17.45■□□□□ 0.38
TOP3B-214ENST00000457270 CYP2E1P05181 493 aaPredicted RBP17.45■□□□□ 0.38
TOP3B-214ENST00000457270 CCDC94Q9BW85 323 aaPredicted RBP17.45■□□□□ 0.38
TOP3B-214ENST00000457270 NOS1P29475 1434 aa17.44■□□□□ 0.38
TOP3B-214ENST00000457270 CAVIN1Q6NZI2 390 aaKnown RBP17.44■□□□□ 0.38
TOP3B-214ENST00000457270 CCDC39Q9UFE4 941 aa17.44■□□□□ 0.38
TOP3B-214ENST00000457270 ARHGAP5Q13017 1502 aa17.44■□□□□ 0.38
TOP3B-214ENST00000457270 NSD3Q9BZ95 1437 aa17.44■□□□□ 0.38
TOP3B-214ENST00000457270 LNPKQ9C0E8 428 aa17.43■□□□□ 0.38
TOP3B-214ENST00000457270 SSH1Q8WYL5 1049 aa17.43■□□□□ 0.38
TOP3B-214ENST00000457270 MCTP1Q6DN14 999 aa17.42■□□□□ 0.38
TOP3B-214ENST00000457270 CFAP53Q96M91 514 aa17.42■□□□□ 0.38
TOP3B-214ENST00000457270 ABCC11Q96J66 1382 aa17.42■□□□□ 0.38
TOP3B-214ENST00000457270 PRIM1P49642 420 aaKnown RBP17.42■□□□□ 0.38
TOP3B-214ENST00000457270 TMEM57Q8N5G2 664 aa17.42■□□□□ 0.38
TOP3B-214ENST00000457270 MYOM2P54296 1465 aa17.42■□□□□ 0.38
TOP3B-214ENST00000457270 TBC1D9Q6ZT07 1266 aa17.41■□□□□ 0.38
TOP3B-214ENST00000457270 MAP3K4Q9Y6R4 1608 aa17.41■□□□□ 0.38
TOP3B-214ENST00000457270 RBM42Q9BTD8 480 aaKnown RBP17.41■□□□□ 0.38
TOP3B-214ENST00000457270 ABCA6Q8N139 1617 aa17.41■□□□□ 0.38
TOP3B-214ENST00000457270 NOB1Q9ULX3 412 aaKnown RBP17.4■□□□□ 0.38
TOP3B-214ENST00000457270 EXOSC9Q06265 439 aaKnown RBP17.4■□□□□ 0.38
TOP3B-214ENST00000457270 ERCC6Q03468 1493 aa17.4■□□□□ 0.38
TOP3B-214ENST00000457270 RABEP1Q15276 862 aa17.39■□□□□ 0.37
TOP3B-214ENST00000457270 GCC1Q96CN9 775 aa17.39■□□□□ 0.37
TOP3B-214ENST00000457270 IPO8O15397 1037 aaKnown RBP17.39■□□□□ 0.37
TOP3B-214ENST00000457270 KIF20AO95235 890 aa17.39■□□□□ 0.37
TOP3B-214ENST00000457270 LRSAM1Q6UWE0 723 aa17.39■□□□□ 0.37
TOP3B-214ENST00000457270 CHMP7Q8WUX9 453 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-214ENST00000457270 MTHFSP49914 203 aa17.38■□□□□ 0.37
TOP3B-214ENST00000457270 TAF7LQ5H9L4 462 aa17.38■□□□□ 0.37
TOP3B-214ENST00000457270 TSR2Q969E8 191 aaKnown RBP17.38■□□□□ 0.37
TOP3B-214ENST00000457270 MED14O60244 1454 aa17.38■□□□□ 0.37
TOP3B-214ENST00000457270 GTPBP4Q9BZE4 634 aaKnown RBP17.38■□□□□ 0.37
TOP3B-214ENST00000457270 CWC22Q9HCG8 908 aaKnown RBP17.38■□□□□ 0.37
TOP3B-214ENST00000457270 IL16Q14005 1332 aa17.38■□□□□ 0.37
TOP3B-214ENST00000457270 PPRC1Q5VV67 1664 aaKnown RBP17.37■□□□□ 0.37
TOP3B-214ENST00000457270 MYRIPQ8NFW9 859 aa17.37■□□□□ 0.37
TOP3B-214ENST00000457270 IPO4Q8TEX9 1081 aaKnown RBP17.37■□□□□ 0.37
TOP3B-214ENST00000457270 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.37■□□□□ 0.375e-7■□□□□ 8.9
TOP3B-214ENST00000457270 AK9Q5TCS8 1911 aa17.37■□□□□ 0.37
TOP3B-214ENST00000457270 INO80Q9ULG1 1556 aaPredicted RBP17.36■□□□□ 0.37
TOP3B-214ENST00000457270 GPT2Q8TD30 523 aa17.36■□□□□ 0.37
TOP3B-214ENST00000457270 CFAP44Q96MT7 982 aa17.36■□□□□ 0.37
TOP3B-214ENST00000457270 CDC45O75419 566 aa17.35■□□□□ 0.37
TOP3B-214ENST00000457270 TET3O43151 1660 aa17.35■□□□□ 0.37
TOP3B-214ENST00000457270 LETM1O95202 739 aaPredicted RBP17.34■□□□□ 0.37
TOP3B-214ENST00000457270 CFAP70Q5T0N1 1121 aa17.34■□□□□ 0.37
TOP3B-214ENST00000457270 TMEM51Q9NW97 253 aa17.34■□□□□ 0.37
TOP3B-214ENST00000457270 CBX1P83916 185 aa17.34■□□□□ 0.37
TOP3B-214ENST00000457270 PPIP5K1Q6PFW1 1433 aa17.34■□□□□ 0.37
TOP3B-214ENST00000457270 ZC3H13Q5T200 1668 aaKnown RBP17.34■□□□□ 0.37
TOP3B-214ENST00000457270 CD109Q6YHK3 1445 aa17.34■□□□□ 0.37
TOP3B-214ENST00000457270 KIAA2012Q0VF49 1180 aa17.34■□□□□ 0.37
TOP3B-214ENST00000457270 ALDH1L2Q3SY69 923 aa17.34■□□□□ 0.37
TOP3B-214ENST00000457270 PRIMPOLQ96LW4 560 aa17.34■□□□□ 0.37
TOP3B-214ENST00000457270 U2AF1L5P0DN76 240 aaPredicted RBP17.33■□□□□ 0.37
TOP3B-214ENST00000457270 GTF2F1P35269 517 aaKnown RBP eCLIP17.33■□□□□ 0.37
TOP3B-214ENST00000457270 U2AF1Q01081 240 aaKnown RBP eCLIP17.33■□□□□ 0.37
TOP3B-214ENST00000457270 ANKRD45Q5TZF3 282 aa17.33■□□□□ 0.37
TOP3B-214ENST00000457270 DEPDC5O75140 1603 aa17.33■□□□□ 0.36
TOP3B-214ENST00000457270 IFT172Q9UG01 1749 aa17.33■□□□□ 0.36
TOP3B-214ENST00000457270 NSD2O96028 1365 aa17.33■□□□□ 0.36
TOP3B-214ENST00000457270 PRPF40AO75400 957 aaKnown RBP17.32■□□□□ 0.36
TOP3B-214ENST00000457270 NRXN1Q9ULB1 1477 aa17.32■□□□□ 0.36
TOP3B-214ENST00000457270 BRPF1P55201 1214 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1621.3 ms