RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.07□□□□□ -1.28
GTF3C3-208ENST00000455546 NKTRP30414 1462 aaKnown RBP7.07□□□□□ -1.28
GTF3C3-208ENST00000455546 PLCG2P16885 1265 aa7.07□□□□□ -1.28
GTF3C3-208ENST00000455546 DCBLD2Q96PD2 775 aa7.07□□□□□ -1.28
GTF3C3-208ENST00000455546 OCEL1Q9H607 264 aa7.07□□□□□ -1.28
GTF3C3-208ENST00000455546 SEMA3EO15041 775 aa7.06□□□□□ -1.28
GTF3C3-208ENST00000455546 PPP1R15BQ5SWA1 713 aa7.06□□□□□ -1.28
GTF3C3-208ENST00000455546 DDX17Q92841 729 aaKnown RBP7.06□□□□□ -1.28
GTF3C3-208ENST00000455546 ARHGEF1Q92888 912 aaKnown RBP7.06□□□□□ -1.28
GTF3C3-208ENST00000455546 RRBP1Q9P2E9 1410 aaKnown RBP7.06□□□□□ -1.28
GTF3C3-208ENST00000455546 METP08581 1390 aa7.06□□□□□ -1.28
GTF3C3-208ENST00000455546 KIF1BO60333 1816 aa7.06□□□□□ -1.28
GTF3C3-208ENST00000455546 NAIPQ13075 1403 aa7.05□□□□□ -1.28
GTF3C3-208ENST00000455546 NUTM2BA6NNL0 878 aaPredicted RBP7.05□□□□□ -1.28
GTF3C3-208ENST00000455546 NUTM2EB1AL46 878 aaPredicted RBP7.05□□□□□ -1.28
GTF3C3-208ENST00000455546 IER5LQ5T953 404 aa7.05□□□□□ -1.28
GTF3C3-208ENST00000455546 NUTM2AQ8IVF1 878 aaPredicted RBP7.05□□□□□ -1.28
GTF3C3-208ENST00000455546 COLQQ9Y215 455 aaPredicted RBP7.05□□□□□ -1.28
GTF3C3-208ENST00000455546 BOLA1Q9Y3E2 137 aa7.05□□□□□ -1.28
GTF3C3-208ENST00000455546 CLTCL1P53675 1640 aa7.05□□□□□ -1.28
GTF3C3-208ENST00000455546 NRXN3Q9Y4C0 1643 aa7.05□□□□□ -1.28
GTF3C3-208ENST00000455546 G3V3G9 751 aa7.04□□□□□ -1.28
GTF3C3-208ENST00000455546 SEC24BO95487 1268 aa7.04□□□□□ -1.28
GTF3C3-208ENST00000455546 DSG2Q14126 1118 aa7.04□□□□□ -1.28
GTF3C3-208ENST00000455546 LMOD2Q6P5Q4 547 aa7.04□□□□□ -1.28
GTF3C3-208ENST00000455546 BRINP3Q76B58 766 aa7.04□□□□□ -1.28
GTF3C3-208ENST00000455546 GPHNQ9NQX3 736 aaPredicted RBP7.04□□□□□ -1.28
GTF3C3-208ENST00000455546 PIK3R4Q99570 1358 aa7.04□□□□□ -1.28
GTF3C3-208ENST00000455546 JCADQ9P266 1359 aa7.04□□□□□ -1.28
GTF3C3-208ENST00000455546 NCOA3Q9Y6Q9 1424 aa7.03□□□□□ -1.28
GTF3C3-208ENST00000455546 TRPM2O94759 1503 aa7.03□□□□□ -1.28
GTF3C3-208ENST00000455546 RGL3Q3MIN7 710 aa7.03□□□□□ -1.28
GTF3C3-208ENST00000455546 MEX3CQ5U5Q3 659 aaKnown RBP7.03□□□□□ -1.28
GTF3C3-208ENST00000455546 TMC2Q8TDI7 906 aa7.03□□□□□ -1.28
GTF3C3-208ENST00000455546 COL16A1Q07092 1604 aaPredicted RBP7.02□□□□□ -1.29
GTF3C3-208ENST00000455546 DIP2AQ14689 1571 aa7.02□□□□□ -1.29
GTF3C3-208ENST00000455546 NEXMIFQ5QGS0 1516 aa7.01□□□□□ -1.29
GTF3C3-208ENST00000455546 SETBP1Q9Y6X0 1596 aa7.01□□□□□ -1.29
GTF3C3-208ENST00000455546 C2orf72A6NCS6 295 aa7.01□□□□□ -1.29
GTF3C3-208ENST00000455546 POTEIP0CG38 1075 aa7.01□□□□□ -1.29
GTF3C3-208ENST00000455546 CAMK2BQ13554 666 aa7.01□□□□□ -1.29
GTF3C3-208ENST00000455546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.01□□□□□ -1.29
GTF3C3-208ENST00000455546 ORAI2Q96SN7 254 aa7.01□□□□□ -1.29
GTF3C3-208ENST00000455546 XRN1Q8IZH2 1706 aaKnown RBP7.01□□□□□ -1.29
GTF3C3-208ENST00000455546 LRP6O75581 1613 aa7.01□□□□□ -1.29
GTF3C3-208ENST00000455546 POTEFA5A3E0 1075 aa7□□□□□ -1.29
GTF3C3-208ENST00000455546 DPYSL4O14531 572 aa7□□□□□ -1.29
GTF3C3-208ENST00000455546 TMEM92Q6UXU6 159 aa7□□□□□ -1.29
GTF3C3-208ENST00000455546 MPHOSPH9Q99550 1183 aa7□□□□□ -1.29
GTF3C3-208ENST00000455546 TMEM121BQ9BXQ6 578 aaPredicted RBP7□□□□□ -1.29
GTF3C3-208ENST00000455546 EMILIN3Q9NT22 766 aa7□□□□□ -1.29
GTF3C3-208ENST00000455546 STK26Q9P289 416 aa7□□□□□ -1.29
GTF3C3-208ENST00000455546 SETD1AO15047 1707 aaKnown RBP7□□□□□ -1.29
GTF3C3-208ENST00000455546 HFM1A2PYH4 1435 aa7□□□□□ -1.29
GTF3C3-208ENST00000455546 MST1RQ04912 1400 aa7□□□□□ -1.29
GTF3C3-208ENST00000455546 SPATA31A6Q5VVP1 1343 aa7□□□□□ -1.29
GTF3C3-208ENST00000455546 ADGRF5Q8IZF2 1346 aa7□□□□□ -1.29
GTF3C3-208ENST00000455546 ROBO2Q9HCK4 1378 aa6.99□□□□□ -1.29
GTF3C3-208ENST00000455546 NUTM2FA1L443 756 aa6.99□□□□□ -1.29
GTF3C3-208ENST00000455546 TESPA1A2RU30 521 aaPredicted RBP6.99□□□□□ -1.29
GTF3C3-208ENST00000455546 TMEM132EQ6IEE7 984 aa6.99□□□□□ -1.29
GTF3C3-208ENST00000455546 WAPLQ7Z5K2 1190 aa6.99□□□□□ -1.29
GTF3C3-208ENST00000455546 PLPP6Q8IY26 295 aa6.99□□□□□ -1.29
GTF3C3-208ENST00000455546 SLC39A7Q92504 469 aa6.99□□□□□ -1.29
GTF3C3-208ENST00000455546 LRRC59Q96AG4 307 aaKnown RBP6.99□□□□□ -1.29
GTF3C3-208ENST00000455546 METRNQ9UJH8 293 aa6.99□□□□□ -1.29
GTF3C3-208ENST00000455546 PPLO60437 1756 aa6.99□□□□□ -1.29
GTF3C3-208ENST00000455546 RPGRIP1LQ68CZ1 1315 aa6.99□□□□□ -1.29
GTF3C3-208ENST00000455546 NALCNQ8IZF0 1738 aa6.98□□□□□ -1.29
GTF3C3-208ENST00000455546 AHDC1Q5TGY3 1603 aaPredicted RBP6.98□□□□□ -1.29
GTF3C3-208ENST00000455546 ADAMTS2O95450 1211 aa6.98□□□□□ -1.29
GTF3C3-208ENST00000455546 ZNF772Q68DY9 489 aaPredicted RBP6.98□□□□□ -1.29
GTF3C3-208ENST00000455546 ASXL1Q8IXJ9 1541 aa6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 SHPRHQ149N8 1683 aa6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 TULP1O00294 542 aaPredicted RBP6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 RXRBP28702 533 aa6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 MLLT3P42568 568 aaPredicted RBP6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 FOXK1P85037 733 aa6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 XPCQ01831 940 aaPredicted RBP6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 ESCO1Q5FWF5 840 aa6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 SP7Q8TDD2 431 aaPredicted RBP6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 UPF1Q92900 1129 aaKnown RBP eCLIP6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 L3MBTL3Q96JM7 780 aaPredicted RBP6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 C8orf37Q96NL8 207 aa6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 ADGRL3Q9HAR2 1447 aa6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 AFF2P51816 1311 aa6.97□□□□□ -1.29
GTF3C3-208ENST00000455546 DCCP43146 1447 aa6.96□□□□□ -1.3
GTF3C3-208ENST00000455546 SETD5Q9C0A6 1442 aa6.96□□□□□ -1.3
GTF3C3-208ENST00000455546 NGLY1Q96IV0 654 aa6.96□□□□□ -1.3
GTF3C3-208ENST00000455546 QTRT2Q9H974 415 aaKnown RBP6.96□□□□□ -1.3
GTF3C3-208ENST00000455546 NHSL1Q5SYE7 1610 aa6.96□□□□□ -1.3
GTF3C3-208ENST00000455546 C1orf167Q5SNV9 1468 aa6.96□□□□□ -1.3
GTF3C3-208ENST00000455546 CCDC144AA2RUR9 1427 aa6.95□□□□□ -1.3
GTF3C3-208ENST00000455546 KIF3CO14782 793 aa6.95□□□□□ -1.3
GTF3C3-208ENST00000455546 FOXO3O43524 673 aa6.95□□□□□ -1.3
GTF3C3-208ENST00000455546 RGPD8O14715 1765 aaPredicted RBP6.95□□□□□ -1.3
GTF3C3-208ENST00000455546 PNPLA6Q8IY17 1366 aa6.95□□□□□ -1.3
GTF3C3-208ENST00000455546 PLEKHH1Q9ULM0 1364 aa6.95□□□□□ -1.3
GTF3C3-208ENST00000455546 C7P10643 843 aa6.94□□□□□ -1.3
GTF3C3-208ENST00000455546 SAFB2Q14151 953 aaKnown RBP eCLIP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms