RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 WASLO00401 505 aaPredicted RBP23.64■■□□□ 1.38
MECP2-205ENST00000453960 ADAMTS13Q76LX8 1427 aa23.64■■□□□ 1.38
MECP2-205ENST00000453960 U2AF1L5P0DN76 240 aaPredicted RBP23.64■■□□□ 1.37
MECP2-205ENST00000453960 U2AF1Q01081 240 aaKnown RBP eCLIP23.64■■□□□ 1.37
MECP2-205ENST00000453960 C3P01024 1663 aa23.63■■□□□ 1.37
MECP2-205ENST00000453960 ITSN1Q15811 1721 aa23.62■■□□□ 1.37
MECP2-205ENST00000453960 BACH2Q9BYV9 841 aa23.62■■□□□ 1.37
MECP2-205ENST00000453960 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
MECP2-205ENST00000453960 RRP7AQ9Y3A4 280 aaKnown RBP23.62■■□□□ 1.37
MECP2-205ENST00000453960 TOPAZ1Q8N9V7 1692 aa23.61■■□□□ 1.37
MECP2-205ENST00000453960 PLEKHG1Q9ULL1 1385 aa23.6■■□□□ 1.37
MECP2-205ENST00000453960 PPIP5K1Q6PFW1 1433 aa23.6■■□□□ 1.37
MECP2-205ENST00000453960 CT47B1P0C2W7 299 aaPredicted RBP23.6■■□□□ 1.37
MECP2-205ENST00000453960 RARSP54136 660 aaKnown RBP23.6■■□□□ 1.37
MECP2-205ENST00000453960 PDE4AP27815 886 aa23.59■■□□□ 1.37
MECP2-205ENST00000453960 AAMPQ13685 434 aa23.59■■□□□ 1.37
MECP2-205ENST00000453960 IL16Q14005 1332 aa23.59■■□□□ 1.37
MECP2-205ENST00000453960 SLIT1O75093 1534 aa23.59■■□□□ 1.37
MECP2-205ENST00000453960 MYH16Q9H6N6 1097 aa23.59■■□□□ 1.37
MECP2-205ENST00000453960 AATKQ6ZMQ8 1374 aa23.58■■□□□ 1.37
MECP2-205ENST00000453960 ARHGAP23Q9P227 1491 aa23.58■■□□□ 1.37
MECP2-205ENST00000453960 TMPOP42166 694 aaKnown RBP23.57■■□□□ 1.36
MECP2-205ENST00000453960 NRKQ7Z2Y5 1582 aa23.57■■□□□ 1.36
MECP2-205ENST00000453960 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.57■■□□□ 1.36
MECP2-205ENST00000453960 DIAPH1O60610 1272 aaKnown RBP23.56■■□□□ 1.36
MECP2-205ENST00000453960 CDK12Q9NYV4 1490 aaPredicted RBP23.56■■□□□ 1.36
MECP2-205ENST00000453960 LRRC7Q96NW7 1537 aa23.56■■□□□ 1.36
MECP2-205ENST00000453960 NEUROD2Q15784 382 aa23.56■■□□□ 1.36
MECP2-205ENST00000453960 PNNQ9H307 717 aaKnown RBP23.56■■□□□ 1.36
MECP2-205ENST00000453960 TRIM35Q9UPQ4 493 aa23.56■■□□□ 1.36
MECP2-205ENST00000453960 POLKQ9UBT6 870 aa23.54■■□□□ 1.36
MECP2-205ENST00000453960 TXNDC2Q86VQ3 553 aa23.53■■□□□ 1.36
MECP2-205ENST00000453960 CCDC61Q9Y6R9 512 aa23.53■■□□□ 1.36
MECP2-205ENST00000453960 FCHSD2O94868 740 aa23.53■■□□□ 1.36
MECP2-205ENST00000453960 NUDT16Q96DE0 195 aaKnown RBP23.53■■□□□ 1.36
MECP2-205ENST00000453960 ROBO2Q9HCK4 1378 aa23.52■■□□□ 1.36
MECP2-205ENST00000453960 ANP32AP39687 249 aaKnown RBP23.52■■□□□ 1.36
MECP2-205ENST00000453960 FER1L4A9Z1Z3 1794 aa23.51■■□□□ 1.35
MECP2-205ENST00000453960 IPO9Q96P70 1041 aaKnown RBP23.51■■□□□ 1.35
MECP2-205ENST00000453960 U2SURPO15042 1029 aaKnown RBP23.5■■□□□ 1.35
MECP2-205ENST00000453960 MAPK8IP3Q9UPT6 1336 aa23.49■■□□□ 1.35
MECP2-205ENST00000453960 DIP2AQ14689 1571 aa23.49■■□□□ 1.35
MECP2-205ENST00000453960 NALCNQ8IZF0 1738 aa23.49■■□□□ 1.35
MECP2-205ENST00000453960 PRR36Q9H6K5 1346 aa23.49■■□□□ 1.35
MECP2-205ENST00000453960 ZNF692Q9BU19 519 aaPredicted RBP23.48■■□□□ 1.35
MECP2-205ENST00000453960 RSPH6AQ9H0K4 717 aa23.48■■□□□ 1.35
MECP2-205ENST00000453960 VIRMAQ69YN4 1812 aaKnown RBP23.48■■□□□ 1.35
MECP2-205ENST00000453960 LTKP29376 864 aa23.47■■□□□ 1.35
MECP2-205ENST00000453960 CLUAP1Q96AJ1 413 aa23.47■■□□□ 1.35
MECP2-205ENST00000453960 NOP58Q9Y2X3 529 aaKnown RBP23.47■■□□□ 1.35
MECP2-205ENST00000453960 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.46■■□□□ 1.355e-7■■■■□ 20.4
MECP2-205ENST00000453960 PTPRUQ92729 1446 aa23.46■■□□□ 1.35
MECP2-205ENST00000453960 PANK1Q8TE04 598 aa23.45■■□□□ 1.34
MECP2-205ENST00000453960 RIMS1Q86UR5 1692 aaKnown RBP23.44■■□□□ 1.34
MECP2-205ENST00000453960 PTCH1Q13635 1447 aa23.44■■□□□ 1.34
MECP2-205ENST00000453960 IL13P35225 146 aa23.44■■□□□ 1.34
MECP2-205ENST00000453960 PLEKHG3A1L390 1219 aa23.43■■□□□ 1.34
MECP2-205ENST00000453960 NME9Q86XW9 330 aa23.43■■□□□ 1.34
MECP2-205ENST00000453960 SKAP1Q86WV1 359 aa23.42■■□□□ 1.34
MECP2-205ENST00000453960 COG6Q9Y2V7 657 aa23.42■■□□□ 1.34
MECP2-205ENST00000453960 RIPK4P57078 832 aa23.42■■□□□ 1.34
MECP2-205ENST00000453960 DLG5Q8TDM6 1919 aa23.42■■□□□ 1.34
MECP2-205ENST00000453960 XRN1Q8IZH2 1706 aaKnown RBP23.42■■□□□ 1.34
MECP2-205ENST00000453960 OVOS2A0A0J9YW53 1432 aa23.41■■□□□ 1.34
MECP2-205ENST00000453960 OVOS2Q6IE36 1432 aa23.41■■□□□ 1.34
MECP2-205ENST00000453960 SSH2Q76I76 1423 aa23.41■■□□□ 1.34
MECP2-205ENST00000453960 IGHDP01880 384 aa23.41■■□□□ 1.34
MECP2-205ENST00000453960 RLBP1P12271 317 aa23.41■■□□□ 1.34
MECP2-205ENST00000453960 CANXP27824 592 aaKnown RBP23.41■■□□□ 1.34
MECP2-205ENST00000453960 ERICH6Q7L0X2 663 aa23.4■■□□□ 1.34
MECP2-205ENST00000453960 TBX22Q9Y458 520 aa23.4■■□□□ 1.34
MECP2-205ENST00000453960 EXOSC9Q06265 439 aaKnown RBP23.39■■□□□ 1.33
MECP2-205ENST00000453960 COG3Q96JB2 828 aa23.39■■□□□ 1.33
MECP2-205ENST00000453960 TSR2Q969E8 191 aaKnown RBP23.38■■□□□ 1.33
MECP2-205ENST00000453960 EMILIN1Q9Y6C2 1016 aa23.38■■□□□ 1.33
MECP2-205ENST00000453960 NCKAP5LQ9HCH0 1330 aa23.38■■□□□ 1.33
MECP2-205ENST00000453960 PAK3O75914 559 aaPredicted RBP23.37■■□□□ 1.33
MECP2-205ENST00000453960 PRKAR2BP31323 418 aa23.37■■□□□ 1.33
MECP2-205ENST00000453960 BRPF1P55201 1214 aaPredicted RBP23.37■■□□□ 1.33
MECP2-205ENST00000453960 NFE2L2Q16236 605 aa23.37■■□□□ 1.33
MECP2-205ENST00000453960 FAM161AQ3B820 660 aa23.37■■□□□ 1.33
MECP2-205ENST00000453960 C8orf34Q49A92 452 aa23.37■■□□□ 1.33
MECP2-205ENST00000453960 ZKSCAN2Q63HK3 967 aa23.37■■□□□ 1.33
MECP2-205ENST00000453960 FRAT1Q92837 279 aaPredicted RBP23.37■■□□□ 1.33
MECP2-205ENST00000453960 RGPD1P0DJD0 1748 aa23.37■■□□□ 1.33
MECP2-205ENST00000453960 USP6P35125 1406 aa23.36■■□□□ 1.33
MECP2-205ENST00000453960 FBLN1P23142 703 aa23.36■■□□□ 1.33
MECP2-205ENST00000453960 PMFBP1Q8TBY8 1022 aa23.36■■□□□ 1.33
MECP2-205ENST00000453960 ZNF428Q96B54 188 aa23.36■■□□□ 1.33
MECP2-205ENST00000453960 USP31Q70CQ4 1352 aa23.36■■□□□ 1.33
MECP2-205ENST00000453960 ZRANB1Q9UGI0 708 aa23.36■■□□□ 1.33
MECP2-205ENST00000453960 TNNQ9UQP3 1299 aa23.36■■□□□ 1.33
MECP2-205ENST00000453960 EID1Q9Y6B2 187 aa23.36■■□□□ 1.33
MECP2-205ENST00000453960 TTC21BQ7Z4L5 1316 aa23.35■■□□□ 1.33
MECP2-205ENST00000453960 MVPQ14764 893 aaKnown RBP23.35■■□□□ 1.33
MECP2-205ENST00000453960 CEBPAP49715 358 aaPredicted RBP23.34■■□□□ 1.33
MECP2-205ENST00000453960 ALDH1L2Q3SY69 923 aa23.34■■□□□ 1.33
MECP2-205ENST00000453960 SSH1Q8WYL5 1049 aa23.33■■□□□ 1.32
MECP2-205ENST00000453960 PCDHB15Q9Y5E8 787 aa23.33■■□□□ 1.32
MECP2-205ENST00000453960 PEAK1Q9H792 1746 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms