RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 TPM2P07951 284 aa21.29■■□□□ 1
TCF3-204ENST00000453954 NUCB1Q02818 461 aa21.29■■□□□ 1
TCF3-204ENST00000453954 OTUD7AQ8TE49 926 aaPredicted RBP21.29■■□□□ 1
TCF3-204ENST00000453954 ZNF830Q96NB3 372 aaPredicted RBP21.29■■□□□ 1
TCF3-204ENST00000453954 CDC45O75419 566 aa21.28■■□□□ 1
TCF3-204ENST00000453954 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.28■■□□□ 1
TCF3-204ENST00000453954 NECTIN2Q92692 538 aa21.28■■□□□ 1
TCF3-204ENST00000453954 ZBTB40Q9NUA8 1239 aa21.28■■□□□ 1
TCF3-204ENST00000453954 KIF16BQ96L93 1317 aa21.28■■□□□ 1
TCF3-204ENST00000453954 ZHX1Q9UKY1 873 aaPredicted RBP21.28■■□□□ 1
TCF3-204ENST00000453954 CASC1Q6TDU7 716 aa21.27■■□□□ 1
TCF3-204ENST00000453954 SMC5Q8IY18 1101 aa21.27■■□□□ 1
TCF3-204ENST00000453954 HDAC1Q13547 482 aaPredicted RBP21.27■■□□□ 1
TCF3-204ENST00000453954 TRIM6-TRIM34B2RNG4 842 aa21.27■□□□□ 0.99
TCF3-204ENST00000453954 RBSNQ9H1K0 784 aa21.27■□□□□ 0.99
TCF3-204ENST00000453954 CHMP3Q9Y3E7 222 aa21.27■□□□□ 0.99
TCF3-204ENST00000453954 EVC2Q86UK5 1308 aa21.26■□□□□ 0.99
TCF3-204ENST00000453954 AAMPQ13685 434 aa21.26■□□□□ 0.99
TCF3-204ENST00000453954 ZSCAN23Q3MJ62 389 aa21.26■□□□□ 0.99
TCF3-204ENST00000453954 RILPL2Q969X0 211 aa21.26■□□□□ 0.99
TCF3-204ENST00000453954 LARP6Q9BRS8 491 aaKnown RBP21.26■□□□□ 0.99
TCF3-204ENST00000453954 NEK4P51957 841 aa21.25■□□□□ 0.99
TCF3-204ENST00000453954 PRDM15P57071 1507 aaPredicted RBP21.25■□□□□ 0.99
TCF3-204ENST00000453954 FAM83GA6ND36 823 aa21.25■□□□□ 0.99
TCF3-204ENST00000453954 JARID2Q92833 1246 aaPredicted RBP21.25■□□□□ 0.99
TCF3-204ENST00000453954 ST18O60284 1047 aa21.24■□□□□ 0.99
TCF3-204ENST00000453954 ZNF692Q9BU19 519 aaPredicted RBP21.24■□□□□ 0.99
TCF3-204ENST00000453954 TRIM35Q9UPQ4 493 aa21.24■□□□□ 0.99
TCF3-204ENST00000453954 E9PCH4 1651 aa21.24■□□□□ 0.99
TCF3-204ENST00000453954 SCAPERQ9BY12 1400 aa21.24■□□□□ 0.99
TCF3-204ENST00000453954 POLR3AO14802 1390 aaPredicted RBP21.23■□□□□ 0.99
TCF3-204ENST00000453954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.23■□□□□ 0.99
TCF3-204ENST00000453954 ABCC10Q5T3U5 1492 aa21.23■□□□□ 0.99
TCF3-204ENST00000453954 NLRP1Q9C000 1473 aa21.23■□□□□ 0.99
TCF3-204ENST00000453954 CIZ1Q9ULV3 898 aaPredicted RBP21.22■□□□□ 0.99
TCF3-204ENST00000453954 PDCL3Q9H2J4 239 aa21.22■□□□□ 0.99
TCF3-204ENST00000453954 SHANK2Q9UPX8 1470 aa21.22■□□□□ 0.99
TCF3-204ENST00000453954 TRAPPC8Q9Y2L5 1435 aa21.22■□□□□ 0.99
TCF3-204ENST00000453954 KRT24Q2M2I5 525 aa21.22■□□□□ 0.99
TCF3-204ENST00000453954 BMP2KLQ5H9B9 411 aa21.21■□□□□ 0.99
TCF3-204ENST00000453954 NUP160Q12769 1436 aa21.21■□□□□ 0.99
TCF3-204ENST00000453954 C17orf53Q8N3J3 647 aaPredicted RBP21.2■□□□□ 0.98
TCF3-204ENST00000453954 UPF3BQ9BZI7 483 aaKnown RBP21.2■□□□□ 0.98
TCF3-204ENST00000453954 RBM25P49756 843 aaKnown RBP21.2■□□□□ 0.98
TCF3-204ENST00000453954 TWISTNBQ3B726 338 aaPredicted RBP21.2■□□□□ 0.98
TCF3-204ENST00000453954 ADCY10Q96PN6 1610 aa21.2■□□□□ 0.98
TCF3-204ENST00000453954 NUCB2P80303 420 aa21.2■□□□□ 0.98
TCF3-204ENST00000453954 KLHL40Q2TBA0 621 aa21.19■□□□□ 0.98
TCF3-204ENST00000453954 ANO2Q9NQ90 1003 aa21.19■□□□□ 0.98
TCF3-204ENST00000453954 NOS1P29475 1434 aa21.19■□□□□ 0.98
TCF3-204ENST00000453954 MIS18AQ9NYP9 233 aa21.19■□□□□ 0.98
TCF3-204ENST00000453954 CFAP65Q6ZU64 1925 aaKnown RBP21.19■□□□□ 0.98
TCF3-204ENST00000453954 PTMSP20962 102 aa21.18■□□□□ 0.98
TCF3-204ENST00000453954 PHACTR3Q96KR7 559 aa21.18■□□□□ 0.98
TCF3-204ENST00000453954 HDGFL2Q7Z4V5 671 aaPredicted RBP21.18■□□□□ 0.98
TCF3-204ENST00000453954 ZNF428Q96B54 188 aa21.18■□□□□ 0.98
TCF3-204ENST00000453954 CABP1Q9NZU7 370 aa21.18■□□□□ 0.98
TCF3-204ENST00000453954 CDC42BPAQ5VT25 1732 aa21.18■□□□□ 0.98
TCF3-204ENST00000453954 CCDC27Q2M243 656 aa21.18■□□□□ 0.98
TCF3-204ENST00000453954 SNX21Q969T3 373 aa21.18■□□□□ 0.98
TCF3-204ENST00000453954 TERF2IPQ9NYB0 399 aa21.17■□□□□ 0.98
TCF3-204ENST00000453954 UGGT1Q9NYU2 1555 aa21.16■□□□□ 0.98
TCF3-204ENST00000453954 RABEP1Q15276 862 aa21.16■□□□□ 0.98
TCF3-204ENST00000453954 GCC1Q96CN9 775 aa21.16■□□□□ 0.98
TCF3-204ENST00000453954 PRAM1Q96QH2 718 aa21.16■□□□□ 0.98
TCF3-204ENST00000453954 ISY1Q9ULR0 285 aaKnown RBP21.16■□□□□ 0.98
TCF3-204ENST00000453954 IGSF3O75054 1194 aa21.15■□□□□ 0.98
TCF3-204ENST00000453954 OFD1O75665 1012 aa21.15■□□□□ 0.98
TCF3-204ENST00000453954 MAP4K4O95819 1239 aaPredicted RBP21.15■□□□□ 0.98
TCF3-204ENST00000453954 NSFL1CQ9UNZ2 370 aaKnown RBP21.15■□□□□ 0.98
TCF3-204ENST00000453954 INTS3Q68E01 1043 aaKnown RBP21.15■□□□□ 0.98
TCF3-204ENST00000453954 RRS1Q15050 365 aaKnown RBP21.15■□□□□ 0.98
TCF3-204ENST00000453954 KIF2CQ99661 725 aa21.15■□□□□ 0.98
TCF3-204ENST00000453954 KIAA2012Q0VF49 1180 aa21.14■□□□□ 0.97
TCF3-204ENST00000453954 AK9Q5TCS8 1911 aa21.14■□□□□ 0.97
TCF3-204ENST00000453954 EMILIN1Q9Y6C2 1016 aa21.13■□□□□ 0.97
TCF3-204ENST00000453954 SAMD9LQ8IVG5 1584 aa21.13■□□□□ 0.97
TCF3-204ENST00000453954 ERVK-7P63135 1459 aa21.13■□□□□ 0.97
TCF3-204ENST00000453954 C8orf58Q8NAV2 365 aa21.13■□□□□ 0.97
TCF3-204ENST00000453954 EXOC6BQ9Y2D4 811 aa21.13■□□□□ 0.97
TCF3-204ENST00000453954 CBX1P83916 185 aa21.13■□□□□ 0.97
TCF3-204ENST00000453954 TAOK2Q9UL54 1235 aa21.13■□□□□ 0.97
TCF3-204ENST00000453954 GSPT1P15170 499 aaKnown RBP21.12■□□□□ 0.97
TCF3-204ENST00000453954 ZBTB7BO15156 539 aaPredicted RBP21.12■□□□□ 0.97
TCF3-204ENST00000453954 SPC24Q8NBT2 197 aa21.12■□□□□ 0.97
TCF3-204ENST00000453954 ABCC2Q92887 1545 aa21.11■□□□□ 0.97
TCF3-204ENST00000453954 DDX54Q8TDD1 881 aaKnown RBP21.11■□□□□ 0.97
TCF3-204ENST00000453954 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.11■□□□□ 0.972e-9■□□□□ 11.3
TCF3-204ENST00000453954 CHMP4BQ9H444 224 aaKnown RBP21.11■□□□□ 0.97
TCF3-204ENST00000453954 ZRANB1Q9UGI0 708 aa21.11■□□□□ 0.97
TCF3-204ENST00000453954 EIF2AK4Q9P2K8 1649 aaKnown RBP21.11■□□□□ 0.97
TCF3-204ENST00000453954 SDSP20132 328 aa21.11■□□□□ 0.97
TCF3-204ENST00000453954 USP25Q9UHP3 1055 aa21.11■□□□□ 0.97
TCF3-204ENST00000453954 F6X3S4 739 aa21.1■□□□□ 0.97
TCF3-204ENST00000453954 FYB1O15117 783 aa21.1■□□□□ 0.97
TCF3-204ENST00000453954 TMEM63CQ9P1W3 806 aa21.1■□□□□ 0.97
TCF3-204ENST00000453954 CROCC2H7BZ55 1655 aa21.1■□□□□ 0.97
TCF3-204ENST00000453954 SIRT2Q8IXJ6 389 aa21.1■□□□□ 0.97
TCF3-204ENST00000453954 LMBRD1Q9NUN5 540 aa21.1■□□□□ 0.97
TCF3-204ENST00000453954 TTC12Q9H892 705 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms