RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 UQCRHLA0A096LP55 91 aa17.05■□□□□ 0.32
UBE2D3-210ENST00000453744 UQCRHP07919 91 aa17.05■□□□□ 0.32
UBE2D3-210ENST00000453744 TRIM6-TRIM34B2RNG4 842 aa17.04■□□□□ 0.32
UBE2D3-210ENST00000453744 SYCE3A1L190 88 aa17.04■□□□□ 0.32
UBE2D3-210ENST00000453744 GCC1Q96CN9 775 aa17.03■□□□□ 0.32
UBE2D3-210ENST00000453744 ZBTB40Q9NUA8 1239 aa17.03■□□□□ 0.32
UBE2D3-210ENST00000453744 KIAA2012Q0VF49 1180 aa17.03■□□□□ 0.32
UBE2D3-210ENST00000453744 PRDM10Q9NQV6 1147 aa17.03■□□□□ 0.32
UBE2D3-210ENST00000453744 BMP2KLQ5H9B9 411 aa17.02■□□□□ 0.32
UBE2D3-210ENST00000453744 PDCL3Q9H2J4 239 aa17.02■□□□□ 0.32
UBE2D3-210ENST00000453744 SMARCA5O60264 1052 aaPredicted RBP17.02■□□□□ 0.31
UBE2D3-210ENST00000453744 CT47B1P0C2W7 299 aaPredicted RBP17.02■□□□□ 0.31
UBE2D3-210ENST00000453744 NEK4P51957 841 aa17.02■□□□□ 0.31
UBE2D3-210ENST00000453744 RABEP1Q15276 862 aa17.02■□□□□ 0.31
UBE2D3-210ENST00000453744 RILPL2Q969X0 211 aa17.02■□□□□ 0.31
UBE2D3-210ENST00000453744 SNX21Q969T3 373 aa17.01■□□□□ 0.31
UBE2D3-210ENST00000453744 CHAMP1Q96JM3 812 aa17.01■□□□□ 0.31
UBE2D3-210ENST00000453744 TRPM1Q7Z4N2 1603 aa17.01■□□□□ 0.31
UBE2D3-210ENST00000453744 INTS3Q68E01 1043 aaKnown RBP17.01■□□□□ 0.31
UBE2D3-210ENST00000453744 PRDM15P57071 1507 aaPredicted RBP17■□□□□ 0.31
UBE2D3-210ENST00000453744 KLHL40Q2TBA0 621 aa17■□□□□ 0.31
UBE2D3-210ENST00000453744 ABCC10Q5T3U5 1492 aa17■□□□□ 0.31
UBE2D3-210ENST00000453744 TWISTNBQ3B726 338 aaPredicted RBP17■□□□□ 0.31
UBE2D3-210ENST00000453744 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
UBE2D3-210ENST00000453744 EIF4G3O43432 1585 aaKnown RBP16.99■□□□□ 0.31
UBE2D3-210ENST00000453744 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
UBE2D3-210ENST00000453744 RBM25P49756 843 aaKnown RBP16.99■□□□□ 0.31
UBE2D3-210ENST00000453744 NPC1L1Q9UHC9 1359 aa16.99■□□□□ 0.31
UBE2D3-210ENST00000453744 ZSCAN23Q3MJ62 389 aa16.99■□□□□ 0.31
UBE2D3-210ENST00000453744 EIF2AK4Q9P2K8 1649 aaKnown RBP16.99■□□□□ 0.31
UBE2D3-210ENST00000453744 DCTN1Q14203 1278 aa16.98■□□□□ 0.31
UBE2D3-210ENST00000453744 BCL11BQ9C0K0 894 aaPredicted RBP16.98■□□□□ 0.31
UBE2D3-210ENST00000453744 CCDC27Q2M243 656 aa16.98■□□□□ 0.31
UBE2D3-210ENST00000453744 ANO2Q9NQ90 1003 aa16.98■□□□□ 0.31
UBE2D3-210ENST00000453744 MCCP23508 829 aa16.97■□□□□ 0.31
UBE2D3-210ENST00000453744 ZGPATQ8N5A5 531 aaKnown RBP16.97■□□□□ 0.31
UBE2D3-210ENST00000453744 REC8O95072 547 aa16.97■□□□□ 0.31
UBE2D3-210ENST00000453744 API5Q9BZZ5 524 aaKnown RBP16.97■□□□□ 0.31
UBE2D3-210ENST00000453744 TSPYL6Q8N831 410 aa16.96■□□□□ 0.31
UBE2D3-210ENST00000453744 GDPD2Q9HCC8 539 aa16.96■□□□□ 0.31
UBE2D3-210ENST00000453744 VGFO15240 615 aaPredicted RBP16.96■□□□□ 0.31
UBE2D3-210ENST00000453744 PKP1Q13835 747 aa16.96■□□□□ 0.31
UBE2D3-210ENST00000453744 SYAP1Q96A49 352 aaPredicted RBP16.96■□□□□ 0.31
UBE2D3-210ENST00000453744 NOS1P29475 1434 aa16.96■□□□□ 0.3
UBE2D3-210ENST00000453744 TRAPPC8Q9Y2L5 1435 aa16.96■□□□□ 0.3
UBE2D3-210ENST00000453744 GNAI1P63096 354 aa16.96■□□□□ 0.3
UBE2D3-210ENST00000453744 CFAP44Q96MT7 982 aa16.96■□□□□ 0.3
UBE2D3-210ENST00000453744 RBSNQ9H1K0 784 aa16.96■□□□□ 0.3
UBE2D3-210ENST00000453744 TRIM35Q9UPQ4 493 aa16.96■□□□□ 0.3
UBE2D3-210ENST00000453744 NUTM2FA1L443 756 aa16.95■□□□□ 0.3
UBE2D3-210ENST00000453744 NECTIN2Q92692 538 aa16.95■□□□□ 0.3
UBE2D3-210ENST00000453744 OFD1O75665 1012 aa16.94■□□□□ 0.3
UBE2D3-210ENST00000453744 CHMP3Q9Y3E7 222 aa16.94■□□□□ 0.3
UBE2D3-210ENST00000453744 ABCC2Q92887 1545 aa16.94■□□□□ 0.3
UBE2D3-210ENST00000453744 CSPP1Q1MSJ5 1256 aa16.94■□□□□ 0.3
UBE2D3-210ENST00000453744 CABP1Q9NZU7 370 aa16.94■□□□□ 0.3
UBE2D3-210ENST00000453744 CCDC39Q9UFE4 941 aa16.94■□□□□ 0.3
UBE2D3-210ENST00000453744 ATAD2Q6PL18 1390 aa16.94■□□□□ 0.3
UBE2D3-210ENST00000453744 PLEKHG5O94827 1062 aa16.93■□□□□ 0.3
UBE2D3-210ENST00000453744 PRAM1Q96QH2 718 aa16.93■□□□□ 0.3
UBE2D3-210ENST00000453744 ESF1Q9H501 851 aaKnown RBP16.93■□□□□ 0.3
UBE2D3-210ENST00000453744 A0A0U1RQG5 324 aaPredicted RBP16.93■□□□□ 0.3
UBE2D3-210ENST00000453744 TSHZ3Q63HK5 1081 aa16.93■□□□□ 0.3
UBE2D3-210ENST00000453744 E9PCH4 1651 aa16.92■□□□□ 0.3
UBE2D3-210ENST00000453744 OTUD7AQ8TE49 926 aaPredicted RBP16.92■□□□□ 0.3
UBE2D3-210ENST00000453744 ZNF830Q96NB3 372 aaPredicted RBP16.92■□□□□ 0.3
UBE2D3-210ENST00000453744 ZNF692Q9BU19 519 aaPredicted RBP16.92■□□□□ 0.3
UBE2D3-210ENST00000453744 UPF3BQ9BZI7 483 aaKnown RBP16.91■□□□□ 0.3
UBE2D3-210ENST00000453744 FAM83GA6ND36 823 aa16.91■□□□□ 0.3
UBE2D3-210ENST00000453744 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBE2D3-210ENST00000453744 HMMRO75330 724 aa16.91■□□□□ 0.3
UBE2D3-210ENST00000453744 DRC7Q8IY82 874 aa16.9■□□□□ 0.3
UBE2D3-210ENST00000453744 CHAF1AQ13111 956 aaPredicted RBP16.9■□□□□ 0.3
UBE2D3-210ENST00000453744 ZHX1Q9UKY1 873 aaPredicted RBP16.9■□□□□ 0.3
UBE2D3-210ENST00000453744 ALDH1L2Q3SY69 923 aa16.9■□□□□ 0.3
UBE2D3-210ENST00000453744 TSPY26PQ9H489 355 aa16.9■□□□□ 0.3
UBE2D3-210ENST00000453744 ZBTB7BO15156 539 aaPredicted RBP16.89■□□□□ 0.3
UBE2D3-210ENST00000453744 CDC42BPAQ5VT25 1732 aa16.89■□□□□ 0.29
UBE2D3-210ENST00000453744 DUOX2Q9NRD8 1548 aa16.89■□□□□ 0.29
UBE2D3-210ENST00000453744 ERVK-7P63135 1459 aa16.89■□□□□ 0.29
UBE2D3-210ENST00000453744 MAP7D2Q96T17 732 aa16.89■□□□□ 0.29
UBE2D3-210ENST00000453744 FAM177BA6PVY3 158 aa16.88■□□□□ 0.29
UBE2D3-210ENST00000453744 FYB1O15117 783 aa16.88■□□□□ 0.29
UBE2D3-210ENST00000453744 CWC22Q9HCG8 908 aaKnown RBP16.88■□□□□ 0.29
UBE2D3-210ENST00000453744 SAMD9LQ8IVG5 1584 aa16.88■□□□□ 0.29
UBE2D3-210ENST00000453744 PHACTR3Q96KR7 559 aa16.88■□□□□ 0.29
UBE2D3-210ENST00000453744 C14orf93Q9H972 538 aaKnown RBP16.88■□□□□ 0.29
UBE2D3-210ENST00000453744 NLRP1Q9C000 1473 aa16.88■□□□□ 0.29
UBE2D3-210ENST00000453744 ADCY10Q96PN6 1610 aa16.88■□□□□ 0.29
UBE2D3-210ENST00000453744 PTPRTO14522 1441 aa16.88■□□□□ 0.29
UBE2D3-210ENST00000453744 FCHSD2O94868 740 aa16.87■□□□□ 0.29
UBE2D3-210ENST00000453744 LARP6Q9BRS8 491 aaKnown RBP16.87■□□□□ 0.29
UBE2D3-210ENST00000453744 EMILIN1Q9Y6C2 1016 aa16.87■□□□□ 0.29
UBE2D3-210ENST00000453744 ERC2O15083 957 aa16.87■□□□□ 0.29
UBE2D3-210ENST00000453744 MBD3O95983 291 aa16.87■□□□□ 0.29
UBE2D3-210ENST00000453744 SDSP20132 328 aa16.87■□□□□ 0.29
UBE2D3-210ENST00000453744 EXOC6BQ9Y2D4 811 aa16.87■□□□□ 0.29
UBE2D3-210ENST00000453744 LMOD3Q0VAK6 560 aa16.87■□□□□ 0.29
UBE2D3-210ENST00000453744 RRS1Q15050 365 aaKnown RBP16.87■□□□□ 0.29
UBE2D3-210ENST00000453744 NFE2L2Q16236 605 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms