RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 TBC1D2Q9BYX2 928 aa9.36□□□□□ -0.91
RIF1-206ENST00000453091 SPINK5Q9NQ38 1064 aaPredicted RBP9.36□□□□□ -0.91
RIF1-206ENST00000453091 SYCE3A1L190 88 aa9.36□□□□□ -0.91
RIF1-206ENST00000453091 KLHL34Q8N239 644 aa9.36□□□□□ -0.91
RIF1-206ENST00000453091 RBM42Q9BTD8 480 aaKnown RBP9.36□□□□□ -0.91
RIF1-206ENST00000453091 ARHGAP5Q13017 1502 aa9.36□□□□□ -0.91
RIF1-206ENST00000453091 CPLX1O14810 134 aa9.36□□□□□ -0.91
RIF1-206ENST00000453091 PDE3AQ14432 1141 aa9.36□□□□□ -0.91
RIF1-206ENST00000453091 RUFY2Q8WXA3 655 aa9.36□□□□□ -0.91
RIF1-206ENST00000453091 CUX1P39880 1505 aa9.35□□□□□ -0.91
RIF1-206ENST00000453091 RBM27Q9P2N5 1060 aaKnown RBP9.35□□□□□ -0.91
RIF1-206ENST00000453091 ESPNB1AK53 854 aa9.35□□□□□ -0.91
RIF1-206ENST00000453091 NFXL1Q6ZNB6 911 aa9.35□□□□□ -0.91
RIF1-206ENST00000453091 MIA2Q96PC5 1412 aa9.35□□□□□ -0.91
RIF1-206ENST00000453091 WASHC4Q2M389 1173 aa9.35□□□□□ -0.91
RIF1-206ENST00000453091 FBXO31Q5XUX0 539 aaPredicted RBP9.35□□□□□ -0.91
RIF1-206ENST00000453091 CAMK4Q16566 473 aa9.35□□□□□ -0.91
RIF1-206ENST00000453091 MARCH6O60337 910 aa9.35□□□□□ -0.91
RIF1-206ENST00000453091 SMC2O95347 1197 aa9.35□□□□□ -0.91
RIF1-206ENST00000453091 GDPD2Q9HCC8 539 aa9.34□□□□□ -0.91
RIF1-206ENST00000453091 CEBPAP49715 358 aaPredicted RBP9.34□□□□□ -0.91
RIF1-206ENST00000453091 PANK2Q9BZ23 570 aa9.34□□□□□ -0.91
RIF1-206ENST00000453091 ERBINQ96RT1 1412 aa9.34□□□□□ -0.91
RIF1-206ENST00000453091 MYL6BP14649 208 aa9.34□□□□□ -0.91
RIF1-206ENST00000453091 PPFIA3O75145 1194 aa9.34□□□□□ -0.91
RIF1-206ENST00000453091 MNS1Q8NEH6 495 aa9.34□□□□□ -0.91
RIF1-206ENST00000453091 FYCO1Q9BQS8 1478 aa9.34□□□□□ -0.91
RIF1-206ENST00000453091 NUTM2BA6NNL0 878 aaPredicted RBP9.34□□□□□ -0.91
RIF1-206ENST00000453091 NUTM2EB1AL46 878 aaPredicted RBP9.34□□□□□ -0.91
RIF1-206ENST00000453091 ATF7IPQ6VMQ6 1270 aa9.34□□□□□ -0.91
RIF1-206ENST00000453091 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
RIF1-206ENST00000453091 TSHZ3Q63HK5 1081 aa9.33□□□□□ -0.92
RIF1-206ENST00000453091 FERMT3Q86UX7 667 aa9.33□□□□□ -0.92
RIF1-206ENST00000453091 FAM177A1Q8N128 213 aaPredicted RBP9.33□□□□□ -0.92
RIF1-206ENST00000453091 UPF3BQ9BZI7 483 aaKnown RBP9.33□□□□□ -0.92
RIF1-206ENST00000453091 MCM10Q7L590 875 aa9.33□□□□□ -0.92
RIF1-206ENST00000453091 TPM2P07951 284 aa9.33□□□□□ -0.92
RIF1-206ENST00000453091 CCDC73Q6ZRK6 1079 aa9.33□□□□□ -0.92
RIF1-206ENST00000453091 KIAA1107Q9UPP5 1409 aa9.33□□□□□ -0.92
RIF1-206ENST00000453091 NCAPD3P42695 1498 aa9.33□□□□□ -0.92
RIF1-206ENST00000453091 CBX1P83916 185 aa9.33□□□□□ -0.92
RIF1-206ENST00000453091 RABEP1Q15276 862 aa9.33□□□□□ -0.92
RIF1-206ENST00000453091 EXOC6BQ9Y2D4 811 aa9.33□□□□□ -0.92
RIF1-206ENST00000453091 HFM1A2PYH4 1435 aa9.32□□□□□ -0.92
RIF1-206ENST00000453091 NAIPQ13075 1403 aa9.32□□□□□ -0.92
RIF1-206ENST00000453091 TNPO1Q92973 898 aaKnown RBP9.32□□□□□ -0.92
RIF1-206ENST00000453091 SNAPC4Q5SXM2 1469 aa9.32□□□□□ -0.92
RIF1-206ENST00000453091 PRDM2Q13029 1718 aa9.32□□□□□ -0.92
RIF1-206ENST00000453091 ZC3H6P61129 1189 aaKnown RBP9.32□□□□□ -0.92
RIF1-206ENST00000453091 RAPGEF4Q8WZA2 1011 aa9.32□□□□□ -0.92
RIF1-206ENST00000453091 TMX1Q9H3N1 280 aa9.32□□□□□ -0.92
RIF1-206ENST00000453091 BRPF1P55201 1214 aaPredicted RBP9.31□□□□□ -0.92
RIF1-206ENST00000453091 NEXNQ0ZGT2 675 aa9.31□□□□□ -0.92
RIF1-206ENST00000453091 ERICH4A6NGS2 130 aa9.31□□□□□ -0.92
RIF1-206ENST00000453091 CWC27Q6UX04 472 aaKnown RBP9.31□□□□□ -0.92
RIF1-206ENST00000453091 ZBTB9Q96C00 473 aa9.31□□□□□ -0.92
RIF1-206ENST00000453091 KIF3AQ9Y496 699 aa9.31□□□□□ -0.92
RIF1-206ENST00000453091 AKAP17AQ02040 695 aaKnown RBP9.31□□□□□ -0.92
RIF1-206ENST00000453091 TRIM29Q14134 588 aa9.31□□□□□ -0.92
RIF1-206ENST00000453091 NME9Q86XW9 330 aa9.31□□□□□ -0.92
RIF1-206ENST00000453091 EMILIN1Q9Y6C2 1016 aa9.31□□□□□ -0.92
RIF1-206ENST00000453091 ADGRF5Q8IZF2 1346 aa9.31□□□□□ -0.92
RIF1-206ENST00000453091 RARSP54136 660 aaKnown RBP9.31□□□□□ -0.92
RIF1-206ENST00000453091 SDF4Q9BRK5 362 aa9.31□□□□□ -0.92
RIF1-206ENST00000453091 GCC1Q96CN9 775 aa9.31□□□□□ -0.92
RIF1-206ENST00000453091 C9orf84Q5VXU9 1444 aa9.31□□□□□ -0.92
RIF1-206ENST00000453091 PRXQ9BXM0 1461 aa9.31□□□□□ -0.92
RIF1-206ENST00000453091 CNTROBQ8N137 903 aa9.3□□□□□ -0.92
RIF1-206ENST00000453091 SSH1Q8WYL5 1049 aa9.3□□□□□ -0.92
RIF1-206ENST00000453091 TRERF1Q96PN7 1200 aa9.3□□□□□ -0.92
RIF1-206ENST00000453091 F6X3S4 739 aa9.3□□□□□ -0.92
RIF1-206ENST00000453091 PROSER2Q86WR7 435 aaPredicted RBP9.3□□□□□ -0.92
RIF1-206ENST00000453091 JARID2Q92833 1246 aaPredicted RBP9.3□□□□□ -0.92
RIF1-206ENST00000453091 ZNF830Q96NB3 372 aaPredicted RBP9.3□□□□□ -0.92
RIF1-206ENST00000453091 DHX16O60231 1041 aaKnown RBP9.3□□□□□ -0.92
RIF1-206ENST00000453091 DDX11Q96FC9 970 aa9.3□□□□□ -0.92
RIF1-206ENST00000453091 SYNE3Q6ZMZ3 975 aa9.3□□□□□ -0.92
RIF1-206ENST00000453091 ERC2O15083 957 aa9.3□□□□□ -0.92
RIF1-206ENST00000453091 RNF20Q5VTR2 975 aa9.3□□□□□ -0.92
RIF1-206ENST00000453091 DUSP27Q5VZP5 1158 aa9.3□□□□□ -0.92
RIF1-206ENST00000453091 DAPK1P53355 1430 aa9.3□□□□□ -0.92
RIF1-206ENST00000453091 POLA1P09884 1462 aaPredicted RBP9.29□□□□□ -0.92
RIF1-206ENST00000453091 SEC24BO95487 1268 aa9.29□□□□□ -0.92
RIF1-206ENST00000453091 ATF3P18847 181 aa9.29□□□□□ -0.92
RIF1-206ENST00000453091 CCDC83Q8IWF9 413 aa9.29□□□□□ -0.92
RIF1-206ENST00000453091 JAKMIP1Q96N16 626 aaKnown RBP9.29□□□□□ -0.92
RIF1-206ENST00000453091 ROCK1Q13464 1354 aa9.29□□□□□ -0.92
RIF1-206ENST00000453091 FBXO3Q9UK99 471 aa9.29□□□□□ -0.92
RIF1-206ENST00000453091 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.28□□□□□ -0.92
RIF1-206ENST00000453091 ZHX1Q9UKY1 873 aaPredicted RBP9.28□□□□□ -0.92
RIF1-206ENST00000453091 HDAC5Q9UQL6 1122 aa9.28□□□□□ -0.92
RIF1-206ENST00000453091 RRP12Q5JTH9 1297 aaKnown RBP9.28□□□□□ -0.92
RIF1-206ENST00000453091 FAM83GA6ND36 823 aa9.28□□□□□ -0.92
RIF1-206ENST00000453091 DTNBO60941 627 aa9.28□□□□□ -0.92
RIF1-206ENST00000453091 NAP1L1P55209 391 aaKnown RBP9.28□□□□□ -0.92
RIF1-206ENST00000453091 MEX3CQ5U5Q3 659 aaKnown RBP9.28□□□□□ -0.92
RIF1-206ENST00000453091 FILIP1Q7Z7B0 1213 aa9.28□□□□□ -0.92
RIF1-206ENST00000453091 TMPOP42166 694 aaKnown RBP9.28□□□□□ -0.92
RIF1-206ENST00000453091 GNAI2P04899 355 aa9.28□□□□□ -0.92
RIF1-206ENST00000453091 NSD3Q9BZ95 1437 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms