RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 SIRT1Q96EB6 747 aa15□□□□□ -0.01
LINC01004-202ENST00000450686 CCDC9Q9Y3X0 531 aaKnown RBP15□□□□□ -0.01
LINC01004-202ENST00000450686 DLC1Q96QB1 1528 aa15□□□□□ -0.01
LINC01004-202ENST00000450686 ADGRB2O60241 1585 aa14.99□□□□□ -0.01
LINC01004-202ENST00000450686 DEFB132Q7Z7B7 95 aa14.99□□□□□ -0.01
LINC01004-202ENST00000450686 NRAPQ86VF7 1730 aa14.97□□□□□ -0.01
LINC01004-202ENST00000450686 NWD2Q9ULI1 1742 aa14.97□□□□□ -0.01
LINC01004-202ENST00000450686 FAM83GA6ND36 823 aa14.97□□□□□ -0.01
LINC01004-202ENST00000450686 SEPT12Q8IYM1 358 aa14.97□□□□□ -0.01
LINC01004-202ENST00000450686 DCAF11Q8TEB1 546 aa14.97□□□□□ -0.01
LINC01004-202ENST00000450686 SBNO1A3KN83 1393 aa14.97□□□□□ -0.01
LINC01004-202ENST00000450686 ALS2Q96Q42 1657 aa14.97□□□□□ -0.01
LINC01004-202ENST00000450686 ZRANB1Q9UGI0 708 aa14.96□□□□□ -0.01
LINC01004-202ENST00000450686 ARHGEF28Q8N1W1 1705 aaKnown RBP14.95□□□□□ -0.02
LINC01004-202ENST00000450686 ANKARQ7Z5J8 1434 aa14.95□□□□□ -0.02
LINC01004-202ENST00000450686 A0A0G2JS52 829 aa14.95□□□□□ -0.02
LINC01004-202ENST00000450686 MYT1Q01538 1121 aa14.95□□□□□ -0.02
LINC01004-202ENST00000450686 VPS72Q15906 364 aa14.95□□□□□ -0.02
LINC01004-202ENST00000450686 CRYBG1Q9Y4K1 1723 aa14.95□□□□□ -0.02
LINC01004-202ENST00000450686 TULP4Q9NRJ4 1543 aa14.94□□□□□ -0.02
LINC01004-202ENST00000450686 ARHGEF10O15013 1369 aa14.94□□□□□ -0.02
LINC01004-202ENST00000450686 ACIN1Q9UKV3 1341 aaKnown RBP14.93□□□□□ -0.02
LINC01004-202ENST00000450686 BLMP54132 1417 aaPredicted RBP14.93□□□□□ -0.02
LINC01004-202ENST00000450686 FAM182BQ5T319 152 aa14.93□□□□□ -0.02
LINC01004-202ENST00000450686 BTG4Q9NY30 223 aa14.93□□□□□ -0.02
LINC01004-202ENST00000450686 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
LINC01004-202ENST00000450686 FAM98CQ17RN3 349 aaKnown RBP14.92□□□□□ -0.02
LINC01004-202ENST00000450686 WASLO00401 505 aaPredicted RBP14.91□□□□□ -0.02
LINC01004-202ENST00000450686 COL14A1Q05707 1796 aaKnown RBP14.9□□□□□ -0.02
LINC01004-202ENST00000450686 ATP7BP35670 1465 aa14.9□□□□□ -0.02
LINC01004-202ENST00000450686 NUTM2GQ5VZR2 741 aa14.9□□□□□ -0.02
LINC01004-202ENST00000450686 KRT27Q7Z3Y8 459 aa14.9□□□□□ -0.02
LINC01004-202ENST00000450686 CCDC125Q86Z20 511 aa14.9□□□□□ -0.02
LINC01004-202ENST00000450686 NGDNQ8NEJ9 315 aaKnown RBP14.9□□□□□ -0.02
LINC01004-202ENST00000450686 GPRASP1Q5JY77 1395 aa14.89□□□□□ -0.03
LINC01004-202ENST00000450686 ABCB7O75027 752 aa14.89□□□□□ -0.03
LINC01004-202ENST00000450686 CHRNA2Q15822 529 aa14.88□□□□□ -0.03
LINC01004-202ENST00000450686 ITSN1Q15811 1721 aa14.88□□□□□ -0.03
LINC01004-202ENST00000450686 PHRF1Q9P1Y6 1649 aaKnown RBP14.88□□□□□ -0.03
LINC01004-202ENST00000450686 PSDA5PKW4 1024 aaPredicted RBP14.87□□□□□ -0.03
LINC01004-202ENST00000450686 ONECUT3O60422 494 aaPredicted RBP14.87□□□□□ -0.03
LINC01004-202ENST00000450686 NUDT16Q96DE0 195 aaKnown RBP14.87□□□□□ -0.03
LINC01004-202ENST00000450686 SF3B2Q13435 895 aaKnown RBP14.86□□□□□ -0.03
LINC01004-202ENST00000450686 EIF3AQ14152 1382 aaKnown RBP14.85□□□□□ -0.03
LINC01004-202ENST00000450686 TOPAZ1Q8N9V7 1692 aa14.85□□□□□ -0.03
LINC01004-202ENST00000450686 CDK19Q9BWU1 502 aa14.85□□□□□ -0.03
LINC01004-202ENST00000450686 PRDM11Q9NQV5 511 aa14.85□□□□□ -0.03
LINC01004-202ENST00000450686 KIAA0232Q92628 1395 aa14.85□□□□□ -0.03
LINC01004-202ENST00000450686 THSD7AQ9UPZ6 1657 aa14.84□□□□□ -0.03
LINC01004-202ENST00000450686 NBPF1Q3BBV0 1214 aa14.84□□□□□ -0.03
LINC01004-202ENST00000450686 STRN4Q9NRL3 753 aa14.84□□□□□ -0.03
LINC01004-202ENST00000450686 SPATA31A5Q5VU36 1347 aa14.84□□□□□ -0.03
LINC01004-202ENST00000450686 SPATA31A7Q8IWB4 1347 aa14.84□□□□□ -0.03
LINC01004-202ENST00000450686 ZC3H6P61129 1189 aaKnown RBP14.83□□□□□ -0.04
LINC01004-202ENST00000450686 POLA2Q14181 598 aa14.83□□□□□ -0.04
LINC01004-202ENST00000450686 TNS1Q9HBL0 1735 aaKnown RBP14.83□□□□□ -0.04
LINC01004-202ENST00000450686 EN1Q05925 392 aaPredicted RBP14.82□□□□□ -0.04
LINC01004-202ENST00000450686 RGPD1P0DJD0 1748 aa14.81□□□□□ -0.04
LINC01004-202ENST00000450686 USP35Q9P2H5 1018 aa14.81□□□□□ -0.04
LINC01004-202ENST00000450686 ACEP12821 1306 aa14.81□□□□□ -0.04
LINC01004-202ENST00000450686 NRKQ7Z2Y5 1582 aa14.81□□□□□ -0.04
LINC01004-202ENST00000450686 BAG6P46379 1132 aa14.79□□□□□ -0.04
LINC01004-202ENST00000450686 KIAA1210Q9ULL0 1709 aa14.79□□□□□ -0.04
LINC01004-202ENST00000450686 SPATA31A1Q5TZJ5 1347 aa14.78□□□□□ -0.04
LINC01004-202ENST00000450686 NBPF8Q3BBV2 869 aa14.78□□□□□ -0.04
LINC01004-202ENST00000450686 QRICH2Q9H0J4 1663 aa14.77□□□□□ -0.04
LINC01004-202ENST00000450686 POLR3AO14802 1390 aaPredicted RBP14.77□□□□□ -0.04
LINC01004-202ENST00000450686 CABP2Q9NPB3 220 aa14.77□□□□□ -0.05
LINC01004-202ENST00000450686 CAMTA1Q9Y6Y1 1673 aa14.77□□□□□ -0.05
LINC01004-202ENST00000450686 LRP5O75197 1615 aa14.77□□□□□ -0.05
LINC01004-202ENST00000450686 ZBTB7CA1YPR0 619 aa14.76□□□□□ -0.05
LINC01004-202ENST00000450686 TRIM37O94972 964 aa14.76□□□□□ -0.05
LINC01004-202ENST00000450686 R3HDM1Q15032 1099 aaKnown RBP14.76□□□□□ -0.05
LINC01004-202ENST00000450686 EZH2Q15910 746 aaKnown RBP14.76□□□□□ -0.05
LINC01004-202ENST00000450686 PPIP5K1Q6PFW1 1433 aa14.75□□□□□ -0.05
LINC01004-202ENST00000450686 SSH2Q76I76 1423 aa14.75□□□□□ -0.05
LINC01004-202ENST00000450686 HRCP23327 699 aa14.75□□□□□ -0.05
LINC01004-202ENST00000450686 SRPK2P78362 688 aaKnown RBP14.75□□□□□ -0.05
LINC01004-202ENST00000450686 LARP1Q6PKG0 1096 aaKnown RBP14.75□□□□□ -0.05
LINC01004-202ENST00000450686 ABTB2Q8N961 1025 aa14.75□□□□□ -0.05
LINC01004-202ENST00000450686 LMO7Q8WWI1 1683 aa14.74□□□□□ -0.05
LINC01004-202ENST00000450686 STAC3Q96MF2 364 aa14.74□□□□□ -0.05
LINC01004-202ENST00000450686 CCDC61Q9Y6R9 512 aa14.74□□□□□ -0.05
LINC01004-202ENST00000450686 PLEKHG3A1L390 1219 aa14.73□□□□□ -0.05
LINC01004-202ENST00000450686 EVA1CP58658 441 aa14.73□□□□□ -0.05
LINC01004-202ENST00000450686 CENPJQ9HC77 1338 aaPredicted RBP14.72□□□□□ -0.05
LINC01004-202ENST00000450686 USP19O94966 1318 aa14.71□□□□□ -0.05
LINC01004-202ENST00000450686 SIN3AQ96ST3 1273 aa14.7□□□□□ -0.06
LINC01004-202ENST00000450686 NUP188Q5SRE5 1749 aa14.69□□□□□ -0.06
LINC01004-202ENST00000450686 DISP2A7MBM2 1401 aa14.69□□□□□ -0.06
LINC01004-202ENST00000450686 PIK3C2AO00443 1686 aa14.69□□□□□ -0.06
LINC01004-202ENST00000450686 APBA3O96018 575 aa14.69□□□□□ -0.06
LINC01004-202ENST00000450686 L3MBTL2Q969R5 705 aa14.69□□□□□ -0.06
LINC01004-202ENST00000450686 CAMKK2Q96RR4 588 aa14.69□□□□□ -0.06
LINC01004-202ENST00000450686 CABP1Q9NZU7 370 aa14.69□□□□□ -0.06
LINC01004-202ENST00000450686 COL5A2P05997 1499 aaPredicted RBP14.69□□□□□ -0.06
LINC01004-202ENST00000450686 RREB1Q92766 1687 aa14.68□□□□□ -0.06
LINC01004-202ENST00000450686 TRPM1Q7Z4N2 1603 aa14.68□□□□□ -0.06
LINC01004-202ENST00000450686 GCP02774 474 aa14.68□□□□□ -0.06
LINC01004-202ENST00000450686 FAM196AQ6ZSG2 479 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms