RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 DNAAF4Q8WXU2 420 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 MAP3K1Q13233 1512 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 ABCC10Q5T3U5 1492 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 A6NNZ2 444 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 PRPF40AO75400 957 aaKnown RBP2.64□□□□□ -1.99
USP53-202ENST00000450251 TUBB8Q3ZCM7 444 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 WDR66Q8TBY9 1149 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 C22orf23Q9BZE7 217 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 PRDM10Q9NQV6 1147 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 ZKSCAN5Q9Y2L8 839 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 A0A1B0GUA9 196 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 REC8O95072 547 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 AKAP17AQ02040 695 aaKnown RBP2.64□□□□□ -1.99
USP53-202ENST00000450251 NEXNQ0ZGT2 675 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 MAP9Q49MG5 647 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 MYRIPQ8NFW9 859 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 EXOC6Q8TAG9 804 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 UACAQ9BZF9 1416 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 KIF21AQ7Z4S6 1674 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 MAGI3Q5TCQ9 1506 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 INSRP06213 1382 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 CCDC196A0A1B0GTZ2 297 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 E9PSI1 815 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 ERCC3P19447 782 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 CACNB1Q02641 598 aaPredicted RBP2.64□□□□□ -1.99
USP53-202ENST00000450251 SRRTQ9BXP5 876 aaKnown RBP2.64□□□□□ -1.99
USP53-202ENST00000450251 CHMP4AQ9BY43 222 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 GEMIN8Q9NWZ8 242 aaKnown RBP2.64□□□□□ -1.99
USP53-202ENST00000450251 TERF2IPQ9NYB0 399 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 CHMP3Q9Y3E7 222 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 ZNF500O60304 480 aaPredicted RBP2.64□□□□□ -1.99
USP53-202ENST00000450251 DYDC1Q8WWB3 177 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 SMC4Q9NTJ3 1288 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.64□□□□□ -1.99
USP53-202ENST00000450251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.64□□□□□ -1.99
USP53-202ENST00000450251 IBTKQ9P2D0 1353 aaPredicted RBP2.64□□□□□ -1.99
USP53-202ENST00000450251 ANKRD18BA2A2Z9 1011 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 CAPN15O75808 1086 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 TUBBP07437 444 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 OS9Q13438 667 aaPredicted RBP2.63□□□□□ -1.99
USP53-202ENST00000450251 GNL2Q13823 731 aaKnown RBP2.63□□□□□ -1.99
USP53-202ENST00000450251 RRP12Q5JTH9 1297 aaKnown RBP2.63□□□□□ -1.99
USP53-202ENST00000450251 CRBNQ96SW2 442 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 HIRIP3Q9BW71 556 aaPredicted RBP2.63□□□□□ -1.99
USP53-202ENST00000450251 NOL7Q9UMY1 257 aaKnown RBP2.63□□□□□ -1.99
USP53-202ENST00000450251 EIF4G3O43432 1585 aaKnown RBP2.63□□□□□ -1.99
USP53-202ENST00000450251 REREQ9P2R6 1566 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 CAVIN2O95810 425 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 ATP6V1AP38606 617 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 SMTNL1A8MU46 457 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 TMF1P82094 1093 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 SLC20A2Q08357 652 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 KLHL40Q2TBA0 621 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 AP1ARQ63HQ0 302 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 SPATS2Q86XZ4 545 aaKnown RBP2.63□□□□□ -1.99
USP53-202ENST00000450251 SPRYD3Q8NCJ5 442 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 MKRN1Q9UHC7 482 aaKnown RBP2.63□□□□□ -1.99
USP53-202ENST00000450251 KDM6BO15054 1643 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 HOOK1Q9UJC3 728 aaKnown RBP2.63□□□□□ -1.99
USP53-202ENST00000450251 ERICH4A6NGS2 130 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 K7ELQ4 463 aaPredicted RBP2.63□□□□□ -1.99
USP53-202ENST00000450251 ZNF853P0CG23 659 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 CCDC192P0DO97 292 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 EZRP15311 586 aaKnown RBP2.63□□□□□ -1.99
USP53-202ENST00000450251 DNAJC21Q5F1R6 531 aaKnown RBP2.63□□□□□ -1.99
USP53-202ENST00000450251 MCTP1Q6DN14 999 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 GBP6Q6ZN66 633 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 HOMER1Q86YM7 354 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 ZNF592Q92610 1267 aa2.63□□□□□ -1.99
USP53-202ENST00000450251 BECN2A8MW95 431 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 CBFA2T2O43439 604 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 PDE3AQ14432 1141 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 KIF18AQ8NI77 898 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 RRAGDQ9NQL2 400 aaPredicted RBP2.62□□□□□ -1.99
USP53-202ENST00000450251 POGKQ9P215 609 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 BIVM-ERCC5R4GMW8 1640 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 MAGI2Q86UL8 1455 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 SPAG9O60271 1321 aaKnown RBP2.62□□□□□ -1.99
USP53-202ENST00000450251 XRCC6P12956 609 aaKnown RBP eCLIP2.62□□□□□ -1.99
USP53-202ENST00000450251 MAP2K2P36507 400 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 NBPF6Q5VWK0 638 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 INTS3Q68E01 1043 aaKnown RBP2.62□□□□□ -1.99
USP53-202ENST00000450251 SEPT14Q6ZU15 432 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 NBPF5PQ86XG9 351 aaPredicted RBP2.62□□□□□ -1.99
USP53-202ENST00000450251 RNF168Q8IYW5 571 aaPredicted RBP2.62□□□□□ -1.99
USP53-202ENST00000450251 CEP112Q8N8E3 955 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 RSRC1Q96IZ7 334 aaKnown RBP2.62□□□□□ -1.99
USP53-202ENST00000450251 NBPF4Q96M43 638 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 CARD11Q9BXL7 1154 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 CAMSAP2Q08AD1 1489 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 GSDMDP57764 484 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 PLB1Q6P1J6 1458 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 PLEKHD1A6NEE1 506 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 ATP8B1O43520 1251 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 CDC45O75419 566 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 HDAC1Q13547 482 aaPredicted RBP2.62□□□□□ -1.99
USP53-202ENST00000450251 PPP1R9BQ96SB3 815 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 DDX19BQ9UMR2 479 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 AKNAQ7Z591 1439 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 CT47B1P0C2W7 299 aaPredicted RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms