RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 RGPD1P0DJD0 1748 aa11.25□□□□□ -0.61
RBM39-218ENST00000449489 R3HDM1Q15032 1099 aaKnown RBP11.24□□□□□ -0.61
RBM39-218ENST00000449489 XPCQ01831 940 aaPredicted RBP11.23□□□□□ -0.61
RBM39-218ENST00000449489 EN1Q05925 392 aaPredicted RBP11.23□□□□□ -0.61
RBM39-218ENST00000449489 CLTCL1P53675 1640 aa11.23□□□□□ -0.61
RBM39-218ENST00000449489 KIF1AQ12756 1690 aa11.23□□□□□ -0.61
RBM39-218ENST00000449489 TECPR2O15040 1411 aa11.22□□□□□ -0.61
RBM39-218ENST00000449489 NAIPQ13075 1403 aa11.22□□□□□ -0.61
RBM39-218ENST00000449489 PLCH1Q4KWH8 1693 aa11.22□□□□□ -0.61
RBM39-218ENST00000449489 PARD3Q8TEW0 1356 aa11.22□□□□□ -0.61
RBM39-218ENST00000449489 LOC105371045A0A1W2PR82 267 aa11.21□□□□□ -0.61
RBM39-218ENST00000449489 PSME1Q06323 249 aa11.21□□□□□ -0.61
RBM39-218ENST00000449489 KRT28Q7Z3Y7 464 aa11.21□□□□□ -0.61
RBM39-218ENST00000449489 CCDC9Q9Y3X0 531 aaKnown RBP11.21□□□□□ -0.61
RBM39-218ENST00000449489 TNS3Q68CZ2 1445 aa11.2□□□□□ -0.62
RBM39-218ENST00000449489 SBNO1A3KN83 1393 aa11.2□□□□□ -0.62
RBM39-218ENST00000449489 PRKAR2AP13861 404 aaKnown RBP11.2□□□□□ -0.62
RBM39-218ENST00000449489 ARHGEF10O15013 1369 aa11.19□□□□□ -0.62
RBM39-218ENST00000449489 FAM83GA6ND36 823 aa11.19□□□□□ -0.62
RBM39-218ENST00000449489 HAP1P54257 671 aaPredicted RBP11.19□□□□□ -0.62
RBM39-218ENST00000449489 CAMKK2Q96RR4 588 aa11.19□□□□□ -0.62
RBM39-218ENST00000449489 TNS1Q9HBL0 1735 aaKnown RBP11.18□□□□□ -0.62
RBM39-218ENST00000449489 FMN2Q9NZ56 1722 aa11.18□□□□□ -0.62
RBM39-218ENST00000449489 ABCC11Q96J66 1382 aa11.18□□□□□ -0.62
RBM39-218ENST00000449489 FAM98CQ17RN3 349 aaKnown RBP11.18□□□□□ -0.62
RBM39-218ENST00000449489 EZH2Q15910 746 aaKnown RBP11.17□□□□□ -0.62
RBM39-218ENST00000449489 SIRT1Q96EB6 747 aa11.17□□□□□ -0.62
RBM39-218ENST00000449489 PPLO60437 1756 aa11.17□□□□□ -0.62
RBM39-218ENST00000449489 NRAPQ86VF7 1730 aa11.17□□□□□ -0.62
RBM39-218ENST00000449489 ABCA3Q99758 1704 aa11.17□□□□□ -0.62
RBM39-218ENST00000449489 NINLQ9Y2I6 1382 aa11.16□□□□□ -0.62
RBM39-218ENST00000449489 ADGRB2O60241 1585 aa11.16□□□□□ -0.62
RBM39-218ENST00000449489 SPATA31A5Q5VU36 1347 aa11.16□□□□□ -0.62
RBM39-218ENST00000449489 SPATA31A7Q8IWB4 1347 aa11.16□□□□□ -0.62
RBM39-218ENST00000449489 A0A0G2JS52 829 aa11.16□□□□□ -0.62
RBM39-218ENST00000449489 PRR29P0C7W0 189 aa11.16□□□□□ -0.62
RBM39-218ENST00000449489 MYT1Q01538 1121 aa11.16□□□□□ -0.62
RBM39-218ENST00000449489 WAPLQ7Z5K2 1190 aa11.16□□□□□ -0.62
RBM39-218ENST00000449489 CABLES1Q8TDN4 633 aa11.16□□□□□ -0.62
RBM39-218ENST00000449489 THSD7AQ9UPZ6 1657 aa11.15□□□□□ -0.62
RBM39-218ENST00000449489 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
RBM39-218ENST00000449489 FAM196AQ6ZSG2 479 aa11.15□□□□□ -0.62
RBM39-218ENST00000449489 PHF8Q9UPP1 1060 aa11.15□□□□□ -0.62
RBM39-218ENST00000449489 GOLGB1Q14789 3259 aaKnown RBP11.15□□□□□ -0.62
RBM39-218ENST00000449489 KNDC1Q76NI1 1749 aa11.15□□□□□ -0.63
RBM39-218ENST00000449489 NRXN1Q9ULB1 1477 aa11.14□□□□□ -0.63
RBM39-218ENST00000449489 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
RBM39-218ENST00000449489 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
RBM39-218ENST00000449489 BTG4Q9NY30 223 aa11.14□□□□□ -0.63
RBM39-218ENST00000449489 COL14A1Q05707 1796 aaKnown RBP11.13□□□□□ -0.63
RBM39-218ENST00000449489 RRBP1Q9P2E9 1410 aaKnown RBP11.13□□□□□ -0.63
RBM39-218ENST00000449489 NBPF8Q3BBV2 869 aa11.13□□□□□ -0.63
RBM39-218ENST00000449489 NBPF14Q5TI25 921 aa11.13□□□□□ -0.63
RBM39-218ENST00000449489 SPON1Q9HCB6 807 aa11.13□□□□□ -0.63
RBM39-218ENST00000449489 RREB1Q92766 1687 aa11.12□□□□□ -0.63
RBM39-218ENST00000449489 RGPD8O14715 1765 aaPredicted RBP11.12□□□□□ -0.63
RBM39-218ENST00000449489 KCNQ2O43526 872 aa11.11□□□□□ -0.63
RBM39-218ENST00000449489 APBA3O96018 575 aa11.11□□□□□ -0.63
RBM39-218ENST00000449489 FAM182BQ5T319 152 aa11.11□□□□□ -0.63
RBM39-218ENST00000449489 PPP1R1BQ9UD71 204 aaPredicted RBP11.11□□□□□ -0.63
RBM39-218ENST00000449489 PLEKHH1Q9ULM0 1364 aa11.11□□□□□ -0.63
RBM39-218ENST00000449489 TRIM37O94972 964 aa11.1□□□□□ -0.63
RBM39-218ENST00000449489 EVX2Q03828 476 aa11.1□□□□□ -0.63
RBM39-218ENST00000449489 STK26Q9P289 416 aa11.1□□□□□ -0.63
RBM39-218ENST00000449489 ANKRD30BQ9BXX2 1392 aa11.1□□□□□ -0.63
RBM39-218ENST00000449489 ADGRF5Q8IZF2 1346 aa11.09□□□□□ -0.63
RBM39-218ENST00000449489 NUP188Q5SRE5 1749 aa11.09□□□□□ -0.63
RBM39-218ENST00000449489 IFT172Q9UG01 1749 aa11.09□□□□□ -0.63
RBM39-218ENST00000449489 LMOD2Q6P5Q4 547 aa11.09□□□□□ -0.63
RBM39-218ENST00000449489 ZNF784Q8NCA9 323 aaPredicted RBP11.09□□□□□ -0.63
RBM39-218ENST00000449489 CIZ1Q9ULV3 898 aaPredicted RBP11.09□□□□□ -0.63
RBM39-218ENST00000449489 ANKARQ7Z5J8 1434 aa11.09□□□□□ -0.63
RBM39-218ENST00000449489 YTHDC2Q9H6S0 1430 aaKnown RBP11.09□□□□□ -0.63
RBM39-218ENST00000449489 SPATA31A1Q5TZJ5 1347 aa11.09□□□□□ -0.63
RBM39-218ENST00000449489 C11orf95C9JLR9 678 aaPredicted RBP11.08□□□□□ -0.64
RBM39-218ENST00000449489 GSE1Q14687 1217 aa11.08□□□□□ -0.64
RBM39-218ENST00000449489 ALS2Q96Q42 1657 aa11.08□□□□□ -0.64
RBM39-218ENST00000449489 TRPM3Q9HCF6 1732 aaPredicted RBP11.07□□□□□ -0.64
RBM39-218ENST00000449489 CHD4Q14839 1912 aa11.07□□□□□ -0.64
RBM39-218ENST00000449489 C1QTNF8P60827 252 aa11.06□□□□□ -0.64
RBM39-218ENST00000449489 TMEM132EQ6IEE7 984 aa11.06□□□□□ -0.64
RBM39-218ENST00000449489 BARGINQ6ZT62 677 aa11.06□□□□□ -0.64
RBM39-218ENST00000449489 PIK3C2GO75747 1445 aa11.06□□□□□ -0.64
RBM39-218ENST00000449489 GPRASP1Q5JY77 1395 aa11.04□□□□□ -0.64
RBM39-218ENST00000449489 CRYBG1Q9Y4K1 1723 aa11.04□□□□□ -0.64
RBM39-218ENST00000449489 SPATA31E1Q6ZUB1 1445 aa11.04□□□□□ -0.64
RBM39-218ENST00000449489 SENP3-EIF4A1A0A087X0R7 540 aa11.04□□□□□ -0.64
RBM39-218ENST00000449489 ITGAEP38570 1179 aa11.04□□□□□ -0.64
RBM39-218ENST00000449489 PDE3BQ13370 1112 aa11.04□□□□□ -0.64
RBM39-218ENST00000449489 PRDM11Q9NQV5 511 aa11.04□□□□□ -0.64
RBM39-218ENST00000449489 RGPD3A6NKT7 1758 aaPredicted RBP11.03□□□□□ -0.64
RBM39-218ENST00000449489 RGPD4Q7Z3J3 1758 aa11.03□□□□□ -0.64
RBM39-218ENST00000449489 PLSCR1O15162 318 aa11.03□□□□□ -0.64
RBM39-218ENST00000449489 PMFBP1Q8TBY8 1022 aa11.03□□□□□ -0.64
RBM39-218ENST00000449489 C14orf93Q9H972 538 aaKnown RBP11.03□□□□□ -0.64
RBM39-218ENST00000449489 CAMTA1Q9Y6Y1 1673 aa11.03□□□□□ -0.64
RBM39-218ENST00000449489 ACIN1Q9UKV3 1341 aaKnown RBP11.03□□□□□ -0.64
RBM39-218ENST00000449489 DHX57Q6P158 1386 aaKnown RBP11.03□□□□□ -0.64
RBM39-218ENST00000449489 C19orf67A6NJJ6 358 aa11.02□□□□□ -0.65
RBM39-218ENST00000449489 CHADLQ6NUI6 762 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms