RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 BCL2L13Q9BXK5 485 aa21.44■■□□□ 1.02
SNHG17-207ENST00000449469 KIF16BQ96L93 1317 aa21.44■■□□□ 1.02
SNHG17-207ENST00000449469 FRAT2O75474 233 aaPredicted RBP21.44■■□□□ 1.02
SNHG17-207ENST00000449469 ZNF428Q96B54 188 aa21.44■■□□□ 1.02
SNHG17-207ENST00000449469 SMC4Q9NTJ3 1288 aa21.44■■□□□ 1.02
SNHG17-207ENST00000449469 KIF20BQ96Q89 1820 aa21.44■■□□□ 1.02
SNHG17-207ENST00000449469 SEC24BO95487 1268 aa21.43■■□□□ 1.02
SNHG17-207ENST00000449469 HDGFL2Q7Z4V5 671 aaPredicted RBP21.43■■□□□ 1.02
SNHG17-207ENST00000449469 ATF7IPQ6VMQ6 1270 aa21.42■■□□□ 1.02
SNHG17-207ENST00000449469 DLC1Q96QB1 1528 aa21.42■■□□□ 1.02
SNHG17-207ENST00000449469 MYO5BQ9ULV0 1848 aa21.42■■□□□ 1.02
SNHG17-207ENST00000449469 TRIM35Q9UPQ4 493 aa21.42■■□□□ 1.02
SNHG17-207ENST00000449469 IPO8O15397 1037 aaKnown RBP21.41■■□□□ 1.02
SNHG17-207ENST00000449469 U2SURPO15042 1029 aaKnown RBP21.41■■□□□ 1.02
SNHG17-207ENST00000449469 FYB1O15117 783 aa21.41■■□□□ 1.02
SNHG17-207ENST00000449469 RAPGEF3O95398 923 aa21.41■■□□□ 1.02
SNHG17-207ENST00000449469 TNNQ9UQP3 1299 aa21.41■■□□□ 1.02
SNHG17-207ENST00000449469 EXOSC9Q06265 439 aaKnown RBP21.4■■□□□ 1.02
SNHG17-207ENST00000449469 ALDH1L2Q3SY69 923 aa21.4■■□□□ 1.02
SNHG17-207ENST00000449469 ARHGEF40Q8TER5 1519 aa21.4■■□□□ 1.02
SNHG17-207ENST00000449469 DIAPH1O60610 1272 aaKnown RBP21.4■■□□□ 1.02
SNHG17-207ENST00000449469 TRIM27P14373 513 aa21.4■■□□□ 1.02
SNHG17-207ENST00000449469 ATP7BP35670 1465 aa21.39■■□□□ 1.02
SNHG17-207ENST00000449469 PPIP5K1Q6PFW1 1433 aa21.39■■□□□ 1.02
SNHG17-207ENST00000449469 ALKQ9UM73 1620 aa21.39■■□□□ 1.02
SNHG17-207ENST00000449469 GGNBP2Q9H3C7 697 aa21.38■■□□□ 1.01
SNHG17-207ENST00000449469 FCHSD2O94868 740 aa21.38■■□□□ 1.01
SNHG17-207ENST00000449469 BRPF1P55201 1214 aaPredicted RBP21.38■■□□□ 1.01
SNHG17-207ENST00000449469 NUTM2DQ5VT03 806 aaPredicted RBP21.38■■□□□ 1.01
SNHG17-207ENST00000449469 IL27Q8NEV9 243 aa21.38■■□□□ 1.01
SNHG17-207ENST00000449469 CHMP4BQ9H444 224 aaKnown RBP21.38■■□□□ 1.01
SNHG17-207ENST00000449469 POGKQ9P215 609 aa21.38■■□□□ 1.01
SNHG17-207ENST00000449469 SSH1Q8WYL5 1049 aa21.37■■□□□ 1.01
SNHG17-207ENST00000449469 TSR2Q969E8 191 aaKnown RBP21.37■■□□□ 1.01
SNHG17-207ENST00000449469 SMC5Q8IY18 1101 aa21.37■■□□□ 1.01
SNHG17-207ENST00000449469 PRAM1Q96QH2 718 aa21.37■■□□□ 1.01
SNHG17-207ENST00000449469 ANTXR1Q9H6X2 564 aa21.37■■□□□ 1.01
SNHG17-207ENST00000449469 PPP6R1Q9UPN7 881 aa21.35■■□□□ 1.01
SNHG17-207ENST00000449469 REREQ9P2R6 1566 aa21.35■■□□□ 1.01
SNHG17-207ENST00000449469 YEATS2Q9ULM3 1422 aa21.35■■□□□ 1.01
SNHG17-207ENST00000449469 RIPK4P57078 832 aa21.35■■□□□ 1.01
SNHG17-207ENST00000449469 CALD1Q05682 793 aaKnown RBP21.35■■□□□ 1.01
SNHG17-207ENST00000449469 ITPRIPQ8IWB1 547 aa21.35■■□□□ 1.01
SNHG17-207ENST00000449469 STK26Q9P289 416 aa21.35■■□□□ 1.01
SNHG17-207ENST00000449469 SAFB2Q14151 953 aaKnown RBP eCLIP21.34■■□□□ 1.01
SNHG17-207ENST00000449469 FAM135BQ49AJ0 1406 aa21.34■■□□□ 1.01
SNHG17-207ENST00000449469 MINK1Q8N4C8 1332 aaPredicted RBP21.33■■□□□ 1.01
SNHG17-207ENST00000449469 LRRC7Q96NW7 1537 aa21.33■■□□□ 1.01
SNHG17-207ENST00000449469 TBC1D2Q9BYX2 928 aa21.32■■□□□ 1
SNHG17-207ENST00000449469 ZBTB40Q9NUA8 1239 aa21.32■■□□□ 1
SNHG17-207ENST00000449469 NOB1Q9ULX3 412 aaKnown RBP21.31■■□□□ 1
SNHG17-207ENST00000449469 CDK19Q9BWU1 502 aa21.3■■□□□ 1
SNHG17-207ENST00000449469 AGLP35573 1532 aa21.3■■□□□ 1
SNHG17-207ENST00000449469 C22orf23Q9BZE7 217 aa21.29■■□□□ 1
SNHG17-207ENST00000449469 ARHGAP45Q92619 1136 aa21.29■■□□□ 1
SNHG17-207ENST00000449469 TMEM57Q8N5G2 664 aa21.28■■□□□ 1
SNHG17-207ENST00000449469 SLKQ9H2G2 1235 aaPredicted RBP21.28■■□□□ 1
SNHG17-207ENST00000449469 L1TD1Q5T7N2 865 aaKnown RBP21.28■■□□□ 1
SNHG17-207ENST00000449469 PIK3R4Q99570 1358 aa21.28■■□□□ 1
SNHG17-207ENST00000449469 RSPH6AQ9H0K4 717 aa21.27■■□□□ 1
SNHG17-207ENST00000449469 BRPF3Q9ULD4 1205 aa21.27■■□□□ 1
SNHG17-207ENST00000449469 CDK12Q9NYV4 1490 aaPredicted RBP21.26■□□□□ 0.99
SNHG17-207ENST00000449469 PTCH1Q13635 1447 aa21.26■□□□□ 0.99
SNHG17-207ENST00000449469 NUCB1Q02818 461 aa21.26■□□□□ 0.99
SNHG17-207ENST00000449469 EDC4Q6P2E9 1401 aaKnown RBP21.25■□□□□ 0.99
SNHG17-207ENST00000449469 SETD1AO15047 1707 aaKnown RBP21.25■□□□□ 0.99
SNHG17-207ENST00000449469 SPATA31D1Q6ZQQ2 1576 aa21.25■□□□□ 0.99
SNHG17-207ENST00000449469 NFE2L2Q16236 605 aa21.25■□□□□ 0.99
SNHG17-207ENST00000449469 CABP1Q9NZU7 370 aa21.25■□□□□ 0.99
SNHG17-207ENST00000449469 AATKQ6ZMQ8 1374 aa21.24■□□□□ 0.99
SNHG17-207ENST00000449469 CHMP5Q9NZZ3 219 aa21.24■□□□□ 0.99
SNHG17-207ENST00000449469 RIMBP3CA6NJZ7 1639 aa21.23■□□□□ 0.99
SNHG17-207ENST00000449469 RIMBP3BA6NNM3 1639 aa21.23■□□□□ 0.99
SNHG17-207ENST00000449469 RIMBP3Q9UFD9 1639 aa21.23■□□□□ 0.99
SNHG17-207ENST00000449469 EIF5BO60841 1220 aaKnown RBP21.23■□□□□ 0.99
SNHG17-207ENST00000449469 LMOD3Q0VAK6 560 aa21.23■□□□□ 0.99
SNHG17-207ENST00000449469 GCC1Q96CN9 775 aa21.23■□□□□ 0.99
SNHG17-207ENST00000449469 IFT57Q9NWB7 429 aa21.23■□□□□ 0.99
SNHG17-207ENST00000449469 A2ML1A8K2U0 1454 aa21.22■□□□□ 0.99
SNHG17-207ENST00000449469 PRKAR2BP31323 418 aa21.22■□□□□ 0.99
SNHG17-207ENST00000449469 POLKQ9UBT6 870 aa21.22■□□□□ 0.99
SNHG17-207ENST00000449469 CPSF1Q10570 1443 aaKnown RBP21.22■□□□□ 0.99
SNHG17-207ENST00000449469 RBM25P49756 843 aaKnown RBP21.22■□□□□ 0.99
SNHG17-207ENST00000449469 MFAP1P55081 439 aaKnown RBP21.22■□□□□ 0.99
SNHG17-207ENST00000449469 GNAI1P63096 354 aa21.22■□□□□ 0.99
SNHG17-207ENST00000449469 STAG3Q9UJ98 1225 aa21.22■□□□□ 0.99
SNHG17-207ENST00000449469 HSCBQ8IWL3 235 aa21.21■□□□□ 0.99
SNHG17-207ENST00000449469 BMP2KLQ5H9B9 411 aa21.2■□□□□ 0.98
SNHG17-207ENST00000449469 CHD1LQ86WJ1 897 aa21.2■□□□□ 0.98
SNHG17-207ENST00000449469 SNX21Q969T3 373 aa21.2■□□□□ 0.98
SNHG17-207ENST00000449469 NCOA3Q9Y6Q9 1424 aa21.19■□□□□ 0.98
SNHG17-207ENST00000449469 KIF24Q5T7B8 1368 aa21.19■□□□□ 0.98
SNHG17-207ENST00000449469 RIMS2Q9UQ26 1411 aa21.19■□□□□ 0.98
SNHG17-207ENST00000449469 MAP2P11137 1827 aaKnown RBP21.18■□□□□ 0.98
SNHG17-207ENST00000449469 KNDC1Q76NI1 1749 aa21.18■□□□□ 0.98
SNHG17-207ENST00000449469 FAM43AQ8N2R8 423 aa21.18■□□□□ 0.98
SNHG17-207ENST00000449469 MCM4P33991 863 aa21.17■□□□□ 0.98
SNHG17-207ENST00000449469 CFAP44Q96MT7 982 aa21.17■□□□□ 0.98
SNHG17-207ENST00000449469 VAMP4O75379 141 aa21.16■□□□□ 0.98
SNHG17-207ENST00000449469 ZNF853P0CG23 659 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms