RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 RRS1Q15050 365 aaKnown RBP8.73□□□□□ -1.01
BEST1-202ENST00000449131 ATP6V1DQ9Y5K8 247 aa8.73□□□□□ -1.01
BEST1-202ENST00000449131 UBTFL1P0CB47 393 aaPredicted RBP8.72□□□□□ -1.01
BEST1-202ENST00000449131 RARSP54136 660 aaKnown RBP8.72□□□□□ -1.01
BEST1-202ENST00000449131 GCC1Q96CN9 775 aa8.72□□□□□ -1.01
BEST1-202ENST00000449131 THUMPD2Q9BTF0 503 aaKnown RBP8.72□□□□□ -1.01
BEST1-202ENST00000449131 SLC4A2P04920 1241 aa8.72□□□□□ -1.01
BEST1-202ENST00000449131 TTC5Q8N0Z6 440 aa8.72□□□□□ -1.01
BEST1-202ENST00000449131 NINLQ9Y2I6 1382 aa8.72□□□□□ -1.01
BEST1-202ENST00000449131 G3BP1Q13283 466 aaKnown RBP eCLIP8.72□□□□□ -1.01
BEST1-202ENST00000449131 H3BQV1 296 aa8.71□□□□□ -1.01
BEST1-202ENST00000449131 AIMP1Q12904 312 aaKnown RBP8.71□□□□□ -1.01
BEST1-202ENST00000449131 IFFO2Q5TF58 517 aa8.71□□□□□ -1.01
BEST1-202ENST00000449131 TMEM57Q8N5G2 664 aa8.71□□□□□ -1.01
BEST1-202ENST00000449131 KDM6BO15054 1643 aa8.71□□□□□ -1.01
BEST1-202ENST00000449131 FCHSD2O94868 740 aa8.71□□□□□ -1.01
BEST1-202ENST00000449131 ABTB2Q8N961 1025 aa8.71□□□□□ -1.01
BEST1-202ENST00000449131 FAM184AQ8NB25 1140 aa8.71□□□□□ -1.01
BEST1-202ENST00000449131 TOMM22Q9NS69 142 aa8.71□□□□□ -1.01
BEST1-202ENST00000449131 RTEL1-TNFRSF6BF6WH68 1400 aa8.71□□□□□ -1.02
BEST1-202ENST00000449131 SURF6O75683 361 aaKnown RBP8.71□□□□□ -1.02
BEST1-202ENST00000449131 DDX58O95786 925 aaKnown RBP8.71□□□□□ -1.02
BEST1-202ENST00000449131 SF3A1Q15459 793 aaKnown RBP8.71□□□□□ -1.02
BEST1-202ENST00000449131 ATAD2Q6PL18 1390 aa8.71□□□□□ -1.02
BEST1-202ENST00000449131 SEC24BO95487 1268 aa8.71□□□□□ -1.02
BEST1-202ENST00000449131 GNAI3P08754 354 aa8.71□□□□□ -1.02
BEST1-202ENST00000449131 WAPLQ7Z5K2 1190 aa8.71□□□□□ -1.02
BEST1-202ENST00000449131 GAS2L2Q8NHY3 880 aa8.71□□□□□ -1.02
BEST1-202ENST00000449131 SSH1Q8WYL5 1049 aa8.71□□□□□ -1.02
BEST1-202ENST00000449131 SLC26A8Q96RN1 970 aa8.71□□□□□ -1.02
BEST1-202ENST00000449131 KIF3AQ9Y496 699 aa8.71□□□□□ -1.02
BEST1-202ENST00000449131 LRRIQ1Q96JM4 1722 aa8.7□□□□□ -1.02
BEST1-202ENST00000449131 NEK4P51957 841 aa8.7□□□□□ -1.02
BEST1-202ENST00000449131 RBM10P98175 930 aaKnown RBP8.7□□□□□ -1.02
BEST1-202ENST00000449131 CCDC30Q5VVM6 783 aa8.7□□□□□ -1.02
BEST1-202ENST00000449131 CHD1LQ86WJ1 897 aa8.7□□□□□ -1.02
BEST1-202ENST00000449131 ZNF692Q9BU19 519 aaPredicted RBP8.7□□□□□ -1.02
BEST1-202ENST00000449131 VPS37CA5D8V6 355 aaPredicted RBP8.7□□□□□ -1.02
BEST1-202ENST00000449131 HSP90AB4PQ58FF6 505 aa8.7□□□□□ -1.02
BEST1-202ENST00000449131 ISY1Q9ULR0 285 aaKnown RBP8.7□□□□□ -1.02
BEST1-202ENST00000449131 FBLN1P23142 703 aa8.69□□□□□ -1.02
BEST1-202ENST00000449131 SPINK5Q9NQ38 1064 aaPredicted RBP8.69□□□□□ -1.02
BEST1-202ENST00000449131 IDI1Q13907 227 aa8.69□□□□□ -1.02
BEST1-202ENST00000449131 NFE2L2Q16236 605 aa8.69□□□□□ -1.02
BEST1-202ENST00000449131 SMC3Q9UQE7 1217 aa8.69□□□□□ -1.02
BEST1-202ENST00000449131 PDIA4P13667 645 aaKnown RBP8.69□□□□□ -1.02
BEST1-202ENST00000449131 CAVIN1Q6NZI2 390 aaKnown RBP8.69□□□□□ -1.02
BEST1-202ENST00000449131 RAPGEF4Q8WZA2 1011 aa8.69□□□□□ -1.02
BEST1-202ENST00000449131 NLRP2Q9NX02 1062 aa8.69□□□□□ -1.02
BEST1-202ENST00000449131 NKTRP30414 1462 aaKnown RBP8.69□□□□□ -1.02
BEST1-202ENST00000449131 MRE11P49959 708 aa8.68□□□□□ -1.02
BEST1-202ENST00000449131 RIC3Q7Z5B4 369 aa8.68□□□□□ -1.02
BEST1-202ENST00000449131 FAM43AQ8N2R8 423 aa8.68□□□□□ -1.02
BEST1-202ENST00000449131 CCDC61Q9Y6R9 512 aa8.68□□□□□ -1.02
BEST1-202ENST00000449131 ERC2O15083 957 aa8.68□□□□□ -1.02
BEST1-202ENST00000449131 HMGB1P09429 215 aaKnown RBP8.68□□□□□ -1.02
BEST1-202ENST00000449131 MCM4P33991 863 aa8.68□□□□□ -1.02
BEST1-202ENST00000449131 SCAF11Q99590 1463 aaKnown RBP8.68□□□□□ -1.02
BEST1-202ENST00000449131 GNAI2P04899 355 aa8.68□□□□□ -1.02
BEST1-202ENST00000449131 DCTN1Q14203 1278 aa8.68□□□□□ -1.02
BEST1-202ENST00000449131 NUDT16Q96DE0 195 aaKnown RBP8.68□□□□□ -1.02
BEST1-202ENST00000449131 TBC1D2Q9BYX2 928 aa8.68□□□□□ -1.02
BEST1-202ENST00000449131 RABEP1Q15276 862 aa8.68□□□□□ -1.02
BEST1-202ENST00000449131 HDGFL1Q5TGJ6 251 aa8.68□□□□□ -1.02
BEST1-202ENST00000449131 CLASRPQ8N2M8 674 aaKnown RBP8.68□□□□□ -1.02
BEST1-202ENST00000449131 ADGRL1O94910 1474 aa8.68□□□□□ -1.02
BEST1-202ENST00000449131 TCOF1Q13428 1488 aaKnown RBP8.68□□□□□ -1.02
BEST1-202ENST00000449131 TPM4P67936 248 aa8.67□□□□□ -1.02
BEST1-202ENST00000449131 PANK2Q9BZ23 570 aa8.67□□□□□ -1.02
BEST1-202ENST00000449131 R3HCC1Q9Y3T6 440 aaKnown RBP8.67□□□□□ -1.02
BEST1-202ENST00000449131 LRPPRCP42704 1394 aaKnown RBP8.67□□□□□ -1.02
BEST1-202ENST00000449131 EVA1CP58658 441 aa8.67□□□□□ -1.02
BEST1-202ENST00000449131 RNF20Q5VTR2 975 aa8.67□□□□□ -1.02
BEST1-202ENST00000449131 RALGAPBQ86X10 1494 aa8.67□□□□□ -1.02
BEST1-202ENST00000449131 FBXO31Q5XUX0 539 aaPredicted RBP8.67□□□□□ -1.02
BEST1-202ENST00000449131 NOS1P29475 1434 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 CD109Q6YHK3 1445 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 TRAPPC8Q9Y2L5 1435 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 GTF2E1P29083 439 aaPredicted RBP8.66□□□□□ -1.02
BEST1-202ENST00000449131 PCDHB15Q9Y5E8 787 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 SYCP2Q9BX26 1530 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 C8orf34Q49A92 452 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 ESCO1Q5FWF5 840 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 TESK2Q96S53 571 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 MIS18AQ9NYP9 233 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 PPP6R1Q9UPN7 881 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 CHD1O14646 1710 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 BECN2A8MW95 431 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 PRPF40AO75400 957 aaKnown RBP8.66□□□□□ -1.02
BEST1-202ENST00000449131 NASPP49321 788 aaPredicted RBP8.66□□□□□ -1.02
BEST1-202ENST00000449131 NME9Q86XW9 330 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 C14orf93Q9H972 538 aaKnown RBP8.66□□□□□ -1.02
BEST1-202ENST00000449131 EMILIN1Q9Y6C2 1016 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 GOLGA6L19H0YKK7 550 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 NEUROD6Q96NK8 337 aa8.66□□□□□ -1.02
BEST1-202ENST00000449131 CCT4P50991 539 aaKnown RBP8.65□□□□□ -1.02
BEST1-202ENST00000449131 CNTROBQ8N137 903 aa8.65□□□□□ -1.02
BEST1-202ENST00000449131 BICD2Q8TD16 824 aa8.65□□□□□ -1.02
BEST1-202ENST00000449131 DHX29Q7Z478 1369 aaKnown RBP8.65□□□□□ -1.02
BEST1-202ENST00000449131 K7ELQ4 463 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms