RNA–Protein interactions for RNA: ENST00000447009.1

APTR-205, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 2 BASIC

Gene APTR, Length 902 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-205ENST00000447009 ATP7BP35670 1465 aa29.92■■■□□ 2.38
APTR-205ENST00000447009 PAK3O75914 559 aaPredicted RBP29.91■■■□□ 2.38
APTR-205ENST00000447009 HRCP23327 699 aa29.91■■■□□ 2.38
APTR-205ENST00000447009 BTG4Q9NY30 223 aa29.91■■■□□ 2.38
APTR-205ENST00000447009 KRT27Q7Z3Y8 459 aa29.89■■■□□ 2.38
APTR-205ENST00000447009 DEFB132Q7Z7B7 95 aa29.89■■■□□ 2.38
APTR-205ENST00000447009 ONECUT3O60422 494 aaPredicted RBP29.87■■■□□ 2.37
APTR-205ENST00000447009 SF3B2Q13435 895 aaKnown RBP29.87■■■□□ 2.37
APTR-205ENST00000447009 FAM98CQ17RN3 349 aaKnown RBP29.86■■■□□ 2.37
APTR-205ENST00000447009 NUDT16Q96DE0 195 aaKnown RBP29.86■■■□□ 2.37
APTR-205ENST00000447009 PHRF1Q9P1Y6 1649 aaKnown RBP29.85■■■□□ 2.37
APTR-205ENST00000447009 TOPAZ1Q8N9V7 1692 aa29.85■■■□□ 2.37
APTR-205ENST00000447009 KIAA1210Q9ULL0 1709 aa29.85■■■□□ 2.37
APTR-205ENST00000447009 CDK19Q9BWU1 502 aa29.81■■■□□ 2.36
APTR-205ENST00000447009 PRDM11Q9NQV5 511 aa29.81■■■□□ 2.36
APTR-205ENST00000447009 NUTM2GQ5VZR2 741 aa29.77■■■□□ 2.36
APTR-205ENST00000447009 KIAA0232Q92628 1395 aa29.77■■■□□ 2.36
APTR-205ENST00000447009 SPATA31A5Q5VU36 1347 aa29.76■■■□□ 2.36
APTR-205ENST00000447009 SPATA31A7Q8IWB4 1347 aa29.76■■■□□ 2.36
APTR-205ENST00000447009 THSD7AQ9UPZ6 1657 aa29.76■■■□□ 2.36
APTR-205ENST00000447009 CHRNA2Q15822 529 aa29.75■■■□□ 2.35
APTR-205ENST00000447009 NBPF1Q3BBV0 1214 aa29.74■■■□□ 2.35
APTR-205ENST00000447009 POLR3AO14802 1390 aaPredicted RBP29.74■■■□□ 2.35
APTR-205ENST00000447009 RGPD1P0DJD0 1748 aa29.74■■■□□ 2.35
APTR-205ENST00000447009 ACEP12821 1306 aa29.73■■■□□ 2.35
APTR-205ENST00000447009 FAM182BQ5T319 152 aa29.73■■■□□ 2.35
APTR-205ENST00000447009 ZC3H6P61129 1189 aaKnown RBP29.71■■■□□ 2.35
APTR-205ENST00000447009 STRN4Q9NRL3 753 aa29.71■■■□□ 2.35
APTR-205ENST00000447009 NRKQ7Z2Y5 1582 aa29.7■■■□□ 2.35
APTR-205ENST00000447009 BAG6P46379 1132 aa29.7■■■□□ 2.35
APTR-205ENST00000447009 CCDC61Q9Y6R9 512 aa29.7■■■□□ 2.35
APTR-205ENST00000447009 SRCAPQ6ZRS2 3230 aa29.69■■■□□ 2.34
APTR-205ENST00000447009 NBPF8Q3BBV2 869 aa29.69■■■□□ 2.34
APTR-205ENST00000447009 QRICH2Q9H0J4 1663 aa29.69■■■□□ 2.34
APTR-205ENST00000447009 TNS1Q9HBL0 1735 aaKnown RBP29.66■■■□□ 2.34
APTR-205ENST00000447009 PLEKHG3A1L390 1219 aa29.66■■■□□ 2.34
APTR-205ENST00000447009 SPATA31A1Q5TZJ5 1347 aa29.66■■■□□ 2.34
APTR-205ENST00000447009 SRPK2P78362 688 aaKnown RBP29.65■■■□□ 2.34
APTR-205ENST00000447009 CENPJQ9HC77 1338 aaPredicted RBP29.65■■■□□ 2.34
APTR-205ENST00000447009 PPIP5K1Q6PFW1 1433 aa29.64■■■□□ 2.34
APTR-205ENST00000447009 ABTB2Q8N961 1025 aa29.63■■■□□ 2.33
APTR-205ENST00000447009 PSDA5PKW4 1024 aaPredicted RBP29.62■■■□□ 2.33
APTR-205ENST00000447009 EN1Q05925 392 aaPredicted RBP29.62■■■□□ 2.33
APTR-205ENST00000447009 USP35Q9P2H5 1018 aa29.62■■■□□ 2.33
APTR-205ENST00000447009 SSH2Q76I76 1423 aa29.62■■■□□ 2.33
APTR-205ENST00000447009 LRP5O75197 1615 aa29.61■■■□□ 2.33
APTR-205ENST00000447009 CABP2Q9NPB3 220 aa29.61■■■□□ 2.33
APTR-205ENST00000447009 LMO7Q8WWI1 1683 aa29.6■■■□□ 2.33
APTR-205ENST00000447009 CAMTA1Q9Y6Y1 1673 aa29.6■■■□□ 2.33
APTR-205ENST00000447009 EVA1CP58658 441 aa29.59■■■□□ 2.33
APTR-205ENST00000447009 USP19O94966 1318 aa29.58■■■□□ 2.33
APTR-205ENST00000447009 CPDO75976 1380 aa29.55■■■□□ 2.32
APTR-205ENST00000447009 DISP2A7MBM2 1401 aa29.54■■■□□ 2.32
APTR-205ENST00000447009 TRPM1Q7Z4N2 1603 aa29.54■■■□□ 2.32
APTR-205ENST00000447009 LARP1Q6PKG0 1096 aaKnown RBP29.54■■■□□ 2.32
APTR-205ENST00000447009 NLRP13Q86W25 1043 aa29.53■■■□□ 2.32
APTR-205ENST00000447009 L3MBTL2Q969R5 705 aa29.53■■■□□ 2.32
APTR-205ENST00000447009 TRIM37O94972 964 aa29.52■■■□□ 2.32
APTR-205ENST00000447009 GCP02774 474 aa29.51■■■□□ 2.31
APTR-205ENST00000447009 EZH2Q15910 746 aaKnown RBP29.51■■■□□ 2.31
APTR-205ENST00000447009 FAM196AQ6ZSG2 479 aa29.51■■■□□ 2.31
APTR-205ENST00000447009 USP6P35125 1406 aa29.51■■■□□ 2.31
APTR-205ENST00000447009 ZBTB7CA1YPR0 619 aa29.5■■■□□ 2.31
APTR-205ENST00000447009 BARGINQ6ZT62 677 aa29.5■■■□□ 2.31
APTR-205ENST00000447009 CABP1Q9NZU7 370 aa29.5■■■□□ 2.31
APTR-205ENST00000447009 COL5A2P05997 1499 aaPredicted RBP29.48■■■□□ 2.31
APTR-205ENST00000447009 PDE3BQ13370 1112 aa29.48■■■□□ 2.31
APTR-205ENST00000447009 TCP11L2Q8N4U5 519 aa29.48■■■□□ 2.31
APTR-205ENST00000447009 SIN3AQ96ST3 1273 aa29.48■■■□□ 2.31
APTR-205ENST00000447009 R3HDM1Q15032 1099 aaKnown RBP29.47■■■□□ 2.31
APTR-205ENST00000447009 BRD4O60885 1362 aaPredicted RBP29.47■■■□□ 2.31
APTR-205ENST00000447009 PIK3C2AO00443 1686 aa29.47■■■□□ 2.31
APTR-205ENST00000447009 SLIT3O75094 1523 aa29.45■■■□□ 2.31
APTR-205ENST00000447009 PARP4Q9UKK3 1724 aaKnown RBP29.45■■■□□ 2.3
APTR-205ENST00000447009 APBA3O96018 575 aa29.44■■■□□ 2.3
APTR-205ENST00000447009 NLRP6P59044 892 aa29.44■■■□□ 2.3
APTR-205ENST00000447009 EVC2Q86UK5 1308 aa29.44■■■□□ 2.3
APTR-205ENST00000447009 NEUROD1Q13562 356 aa29.43■■■□□ 2.3
APTR-205ENST00000447009 CAMKK2Q96RR4 588 aa29.43■■■□□ 2.3
APTR-205ENST00000447009 ROCK2O75116 1388 aaKnown RBP29.42■■■□□ 2.3
APTR-205ENST00000447009 RREB1Q92766 1687 aa29.42■■■□□ 2.3
APTR-205ENST00000447009 AKAP12Q02952 1782 aa29.41■■■□□ 2.3
APTR-205ENST00000447009 CRB1P82279 1406 aa29.4■■■□□ 2.3
APTR-205ENST00000447009 THRAP3Q9Y2W1 955 aaKnown RBP29.4■■■□□ 2.3
APTR-205ENST00000447009 NUP188Q5SRE5 1749 aa29.4■■■□□ 2.3
APTR-205ENST00000447009 COL18A1P39060 1754 aa29.38■■■□□ 2.29
APTR-205ENST00000447009 AATKQ6ZMQ8 1374 aa29.38■■■□□ 2.29
APTR-205ENST00000447009 LRRC37A3O60309 1634 aa29.37■■■□□ 2.29
APTR-205ENST00000447009 PARD3Q8TEW0 1356 aa29.37■■■□□ 2.29
APTR-205ENST00000447009 WNK3Q9BYP7 1800 aa29.36■■■□□ 2.29
APTR-205ENST00000447009 RGPD5Q99666 1765 aa29.34■■■□□ 2.29
APTR-205ENST00000447009 PEAK1Q9H792 1746 aa29.32■■■□□ 2.28
APTR-205ENST00000447009 CPSF1Q10570 1443 aaKnown RBP29.32■■■□□ 2.28
APTR-205ENST00000447009 TTC21BQ7Z4L5 1316 aa29.32■■■□□ 2.28
APTR-205ENST00000447009 SOX12O15370 315 aa29.32■■■□□ 2.28
APTR-205ENST00000447009 TOM1L2Q6ZVM7 507 aa29.32■■■□□ 2.28
APTR-205ENST00000447009 OVOS2A0A0G2JMS6 1433 aa29.3■■■□□ 2.28
APTR-205ENST00000447009 OVOS2A0A0J9YW53 1432 aa29.3■■■□□ 2.28
APTR-205ENST00000447009 OVOS2Q6IE36 1432 aa29.3■■■□□ 2.28
APTR-205ENST00000447009 SBF2Q86WG5 1849 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms