RNA–Protein interactions for RNA: ENST00000442934.6

MSI2-204, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,624 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-204ENST00000442934 PNPLA6Q8IY17 1366 aa21.3■■□□□ 1
MSI2-204ENST00000442934 MAP2P11137 1827 aaKnown RBP21.3■■□□□ 1
MSI2-204ENST00000442934 SSH2Q76I76 1423 aa21.28■■□□□ 1
MSI2-204ENST00000442934 COG3Q96JB2 828 aa21.27■■□□□ 1
MSI2-204ENST00000442934 TTC21BQ7Z4L5 1316 aa21.27■■□□□ 1
MSI2-204ENST00000442934 TTC21AQ8NDW8 1320 aa21.27■■□□□ 1
MSI2-204ENST00000442934 FKBP8Q14318 412 aa21.26■□□□□ 0.99
MSI2-204ENST00000442934 CDK12Q9NYV4 1490 aaPredicted RBP21.26■□□□□ 0.99
MSI2-204ENST00000442934 NCBP3Q53F19 620 aaKnown RBP21.26■□□□□ 0.99
MSI2-204ENST00000442934 NME9Q86XW9 330 aa21.26■□□□□ 0.99
MSI2-204ENST00000442934 ZNF521Q96K83 1311 aa21.25■□□□□ 0.99
MSI2-204ENST00000442934 IQSEC2Q5JU85 1478 aa21.25■□□□□ 0.99
MSI2-204ENST00000442934 ERICH6BQ5W0A0 696 aa21.25■□□□□ 0.99
MSI2-204ENST00000442934 RUNDC1Q96C34 613 aa21.25■□□□□ 0.99
MSI2-204ENST00000442934 USP54Q70EL1 1684 aa21.24■□□□□ 0.99
MSI2-204ENST00000442934 OVOS2A0A0J9YW53 1432 aa21.24■□□□□ 0.99
MSI2-204ENST00000442934 OVOS2Q6IE36 1432 aa21.24■□□□□ 0.99
MSI2-204ENST00000442934 SALL2Q9Y467 1007 aaPredicted RBP21.24■□□□□ 0.99
MSI2-204ENST00000442934 NUTM2FA1L443 756 aa21.22■□□□□ 0.99
MSI2-204ENST00000442934 CCDC146Q8IYE0 955 aa21.22■□□□□ 0.99
MSI2-204ENST00000442934 LRRC7Q96NW7 1537 aa21.22■□□□□ 0.99
MSI2-204ENST00000442934 SENP3-EIF4A1A0A087X0R7 540 aa21.22■□□□□ 0.99
MSI2-204ENST00000442934 APAF1O14727 1248 aa21.22■□□□□ 0.99
MSI2-204ENST00000442934 POLKQ9UBT6 870 aa21.22■□□□□ 0.99
MSI2-204ENST00000442934 RNF123Q5XPI4 1314 aa21.21■□□□□ 0.99
MSI2-204ENST00000442934 NGDNQ8NEJ9 315 aaKnown RBP21.21■□□□□ 0.99
MSI2-204ENST00000442934 DIAPH1O60610 1272 aaKnown RBP21.2■□□□□ 0.98
MSI2-204ENST00000442934 USP31Q70CQ4 1352 aa21.19■□□□□ 0.98
MSI2-204ENST00000442934 PNNQ9H307 717 aaKnown RBP21.19■□□□□ 0.98
MSI2-204ENST00000442934 U2AF1L5P0DN76 240 aaPredicted RBP21.18■□□□□ 0.98
MSI2-204ENST00000442934 U2AF1Q01081 240 aaKnown RBP eCLIP21.18■□□□□ 0.98
MSI2-204ENST00000442934 GOLGA2Q08379 1002 aa21.18■□□□□ 0.98
MSI2-204ENST00000442934 PIK3C2AO00443 1686 aa21.18■□□□□ 0.98
MSI2-204ENST00000442934 NCOA3Q9Y6Q9 1424 aa21.18■□□□□ 0.98
MSI2-204ENST00000442934 KDM4FA0A1W2PPD8 638 aa21.17■□□□□ 0.98
MSI2-204ENST00000442934 PMFBP1Q8TBY8 1022 aa21.17■□□□□ 0.98
MSI2-204ENST00000442934 LMTK3Q96Q04 1460 aa21.16■□□□□ 0.98
MSI2-204ENST00000442934 CCDC27Q2M243 656 aa21.15■□□□□ 0.98
MSI2-204ENST00000442934 CDCA7LQ96GN5 454 aa21.15■□□□□ 0.98
MSI2-204ENST00000442934 ZRANB1Q9UGI0 708 aa21.15■□□□□ 0.98
MSI2-204ENST00000442934 KIF1AQ12756 1690 aa21.14■□□□□ 0.98
MSI2-204ENST00000442934 U2SURPO15042 1029 aaKnown RBP21.14■□□□□ 0.97
MSI2-204ENST00000442934 TCP11L2Q8N4U5 519 aa21.14■□□□□ 0.97
MSI2-204ENST00000442934 PHF8Q9UPP1 1060 aa21.14■□□□□ 0.97
MSI2-204ENST00000442934 PROSER2Q86WR7 435 aaPredicted RBP21.13■□□□□ 0.97
MSI2-204ENST00000442934 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
MSI2-204ENST00000442934 RCAN3Q9UKA8 241 aa21.13■□□□□ 0.97
MSI2-204ENST00000442934 STRCP1A6NGW2 1772 aa21.13■□□□□ 0.97
MSI2-204ENST00000442934 DCCP43146 1447 aa21.12■□□□□ 0.97
MSI2-204ENST00000442934 SLFN5Q08AF3 891 aa21.12■□□□□ 0.97
MSI2-204ENST00000442934 C14orf37Q86TY3 774 aa21.12■□□□□ 0.97
MSI2-204ENST00000442934 EMILIN1Q9Y6C2 1016 aa21.12■□□□□ 0.97
MSI2-204ENST00000442934 MARF1Q9Y4F3 1742 aaKnown RBP21.12■□□□□ 0.97
MSI2-204ENST00000442934 E9PSI1 815 aa21.11■□□□□ 0.97
MSI2-204ENST00000442934 TRMT2AQ8IZ69 625 aaKnown RBP21.11■□□□□ 0.97
MSI2-204ENST00000442934 STRCQ7RTU9 1775 aa21.11■□□□□ 0.97
MSI2-204ENST00000442934 FCHSD2O94868 740 aa21.11■□□□□ 0.97
MSI2-204ENST00000442934 DUSP27Q5VZP5 1158 aa21.11■□□□□ 0.97
MSI2-204ENST00000442934 PLEKHF1Q96S99 279 aa21.11■□□□□ 0.97
MSI2-204ENST00000442934 PPM1GO15355 546 aaPredicted RBP21.1■□□□□ 0.97
MSI2-204ENST00000442934 WWC1Q8IX03 1113 aa21.1■□□□□ 0.97
MSI2-204ENST00000442934 MAPK8IP3Q9UPT6 1336 aa21.09■□□□□ 0.97
MSI2-204ENST00000442934 WDR63Q8IWG1 891 aa21.09■□□□□ 0.97
MSI2-204ENST00000442934 IL13P35225 146 aa21.08■□□□□ 0.97
MSI2-204ENST00000442934 C19orf44Q9H6X5 657 aa21.08■□□□□ 0.97
MSI2-204ENST00000442934 PEAK1Q9H792 1746 aa21.08■□□□□ 0.97
MSI2-204ENST00000442934 KIF24Q5T7B8 1368 aa21.08■□□□□ 0.96
MSI2-204ENST00000442934 FBLN1P23142 703 aa21.07■□□□□ 0.96
MSI2-204ENST00000442934 HSPA2P54652 639 aa21.06■□□□□ 0.96
MSI2-204ENST00000442934 RRS1Q15050 365 aaKnown RBP21.06■□□□□ 0.96
MSI2-204ENST00000442934 PELP1Q8IZL8 1130 aaKnown RBP21.06■□□□□ 0.96
MSI2-204ENST00000442934 RBM33Q96EV2 1170 aaKnown RBP21.06■□□□□ 0.96
MSI2-204ENST00000442934 NEFMP07197 916 aa21.05■□□□□ 0.96
MSI2-204ENST00000442934 RRP1P56182 461 aaKnown RBP21.05■□□□□ 0.96
MSI2-204ENST00000442934 ESCO1Q5FWF5 840 aa21.04■□□□□ 0.96
MSI2-204ENST00000442934 RSPH6AQ9H0K4 717 aa21.04■□□□□ 0.96
MSI2-204ENST00000442934 SBNO1A3KN83 1393 aa21.04■□□□□ 0.96
MSI2-204ENST00000442934 TMEM94Q12767 1356 aa21.04■□□□□ 0.96
MSI2-204ENST00000442934 RGPD1P0DJD0 1748 aa21.04■□□□□ 0.96
MSI2-204ENST00000442934 C1orf167Q5SNV9 1468 aa21.04■□□□□ 0.96
MSI2-204ENST00000442934 FLT4P35916 1363 aa21.03■□□□□ 0.96
MSI2-204ENST00000442934 IRX6P78412 446 aaPredicted RBP21.03■□□□□ 0.96
MSI2-204ENST00000442934 PPP4R2Q9NY27 417 aa21.03■□□□□ 0.96
MSI2-204ENST00000442934 TMPOP42166 694 aaKnown RBP21.02■□□□□ 0.96
MSI2-204ENST00000442934 NLRP6P59044 892 aa21.02■□□□□ 0.96
MSI2-204ENST00000442934 TRPM3Q9HCF6 1732 aaPredicted RBP21.02■□□□□ 0.95
MSI2-204ENST00000442934 RRP7AQ9Y3A4 280 aaKnown RBP21.01■□□□□ 0.95
MSI2-204ENST00000442934 PSME1Q06323 249 aa21■□□□□ 0.95
MSI2-204ENST00000442934 NEUROD2Q15784 382 aa21■□□□□ 0.95
MSI2-204ENST00000442934 ABTB2Q8N961 1025 aa21■□□□□ 0.95
MSI2-204ENST00000442934 MST1RQ04912 1400 aa21■□□□□ 0.95
MSI2-204ENST00000442934 MAP3K19Q56UN5 1328 aa21■□□□□ 0.95
MSI2-204ENST00000442934 XIRP1Q702N8 1843 aaKnown RBP20.99■□□□□ 0.95
MSI2-204ENST00000442934 PHRF1Q9P1Y6 1649 aaKnown RBP20.99■□□□□ 0.95
MSI2-204ENST00000442934 RTL1A6NKG5 1358 aa20.99■□□□□ 0.95
MSI2-204ENST00000442934 IL16Q14005 1332 aa20.99■□□□□ 0.95
MSI2-204ENST00000442934 ATF3P18847 181 aa20.99■□□□□ 0.95
MSI2-204ENST00000442934 PRKAR2BP31323 418 aa20.99■□□□□ 0.95
MSI2-204ENST00000442934 SPINK5Q9NQ38 1064 aaPredicted RBP20.99■□□□□ 0.95
MSI2-204ENST00000442934 PAK3O75914 559 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms