RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
TOP3B-209ENST00000442653 EIF3AQ14152 1382 aaKnown RBP12.26□□□□□ -0.45
TOP3B-209ENST00000442653 GPRASP1Q5JY77 1395 aa12.26□□□□□ -0.45
TOP3B-209ENST00000442653 ARHGEF28Q8N1W1 1705 aaKnown RBP12.25□□□□□ -0.45
TOP3B-209ENST00000442653 CRYBG1Q9Y4K1 1723 aa12.25□□□□□ -0.45
TOP3B-209ENST00000442653 ATP7BP35670 1465 aa12.25□□□□□ -0.45
TOP3B-209ENST00000442653 COL14A1Q05707 1796 aaKnown RBP12.25□□□□□ -0.45
TOP3B-209ENST00000442653 FAM98CQ17RN3 349 aaKnown RBP12.24□□□□□ -0.45
TOP3B-209ENST00000442653 A0A0G2JS52 829 aa12.23□□□□□ -0.45
TOP3B-209ENST00000442653 MYT1Q01538 1121 aa12.23□□□□□ -0.45
TOP3B-209ENST00000442653 NGDNQ8NEJ9 315 aaKnown RBP12.23□□□□□ -0.45
TOP3B-209ENST00000442653 PAK3O75914 559 aaPredicted RBP12.22□□□□□ -0.45
TOP3B-209ENST00000442653 SPATA31A5Q5VU36 1347 aa12.21□□□□□ -0.45
TOP3B-209ENST00000442653 SPATA31A7Q8IWB4 1347 aa12.21□□□□□ -0.45
TOP3B-209ENST00000442653 ITSN1Q15811 1721 aa12.21□□□□□ -0.45
TOP3B-209ENST00000442653 SF3B2Q13435 895 aaKnown RBP12.21□□□□□ -0.45
TOP3B-209ENST00000442653 NUDT16Q96DE0 195 aaKnown RBP12.21□□□□□ -0.45
TOP3B-209ENST00000442653 STAC3Q96MF2 364 aa12.21□□□□□ -0.45
TOP3B-209ENST00000442653 KIAA0232Q92628 1395 aa12.2□□□□□ -0.46
TOP3B-209ENST00000442653 THSD7AQ9UPZ6 1657 aa12.2□□□□□ -0.46
TOP3B-209ENST00000442653 HRCP23327 699 aa12.2□□□□□ -0.46
TOP3B-209ENST00000442653 FAM182BQ5T319 152 aa12.2□□□□□ -0.46
TOP3B-209ENST00000442653 PRDM11Q9NQV5 511 aa12.2□□□□□ -0.46
TOP3B-209ENST00000442653 TOPAZ1Q8N9V7 1692 aa12.19□□□□□ -0.46
TOP3B-209ENST00000442653 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
TOP3B-209ENST00000442653 CHRNA2Q15822 529 aa12.18□□□□□ -0.46
TOP3B-209ENST00000442653 NUTM2GQ5VZR2 741 aa12.18□□□□□ -0.46
TOP3B-209ENST00000442653 CDK19Q9BWU1 502 aa12.18□□□□□ -0.46
TOP3B-209ENST00000442653 POLR3AO14802 1390 aaPredicted RBP12.18□□□□□ -0.46
TOP3B-209ENST00000442653 PSDA5PKW4 1024 aaPredicted RBP12.17□□□□□ -0.46
TOP3B-209ENST00000442653 BAG6P46379 1132 aa12.17□□□□□ -0.46
TOP3B-209ENST00000442653 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
TOP3B-209ENST00000442653 ACEP12821 1306 aa12.16□□□□□ -0.46
TOP3B-209ENST00000442653 SPATA31A1Q5TZJ5 1347 aa12.16□□□□□ -0.46
TOP3B-209ENST00000442653 LRP5O75197 1615 aa12.16□□□□□ -0.46
TOP3B-209ENST00000442653 ZC3H6P61129 1189 aaKnown RBP12.16□□□□□ -0.46
TOP3B-209ENST00000442653 EN1Q05925 392 aaPredicted RBP12.16□□□□□ -0.46
TOP3B-209ENST00000442653 NBPF1Q3BBV0 1214 aa12.16□□□□□ -0.46
TOP3B-209ENST00000442653 NBPF8Q3BBV2 869 aa12.16□□□□□ -0.46
TOP3B-209ENST00000442653 NCBP3Q53F19 620 aaKnown RBP12.16□□□□□ -0.46
TOP3B-209ENST00000442653 CCDC61Q9Y6R9 512 aa12.16□□□□□ -0.46
TOP3B-209ENST00000442653 RGPD1P0DJD0 1748 aa12.16□□□□□ -0.46
TOP3B-209ENST00000442653 TNS1Q9HBL0 1735 aaKnown RBP12.16□□□□□ -0.46
TOP3B-209ENST00000442653 KIAA1210Q9ULL0 1709 aa12.16□□□□□ -0.46
TOP3B-209ENST00000442653 NRKQ7Z2Y5 1582 aa12.15□□□□□ -0.46
TOP3B-209ENST00000442653 STRN4Q9NRL3 753 aa12.15□□□□□ -0.46
TOP3B-209ENST00000442653 DISP2A7MBM2 1401 aa12.14□□□□□ -0.47
TOP3B-209ENST00000442653 PLEKHG3A1L390 1219 aa12.14□□□□□ -0.47
TOP3B-209ENST00000442653 CAMTA1Q9Y6Y1 1673 aa12.13□□□□□ -0.47
TOP3B-209ENST00000442653 SSH2Q76I76 1423 aa12.13□□□□□ -0.47
TOP3B-209ENST00000442653 LMO7Q8WWI1 1683 aa12.13□□□□□ -0.47
TOP3B-209ENST00000442653 USP19O94966 1318 aa12.12□□□□□ -0.47
TOP3B-209ENST00000442653 ABTB2Q8N961 1025 aa12.12□□□□□ -0.47
TOP3B-209ENST00000442653 USP35Q9P2H5 1018 aa12.12□□□□□ -0.47
TOP3B-209ENST00000442653 PPIP5K1Q6PFW1 1433 aa12.11□□□□□ -0.47
TOP3B-209ENST00000442653 CPDO75976 1380 aa12.11□□□□□ -0.47
TOP3B-209ENST00000442653 TRIM37O94972 964 aa12.11□□□□□ -0.47
TOP3B-209ENST00000442653 LARP1Q6PKG0 1096 aaKnown RBP12.11□□□□□ -0.47
TOP3B-209ENST00000442653 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
TOP3B-209ENST00000442653 SRPK2P78362 688 aaKnown RBP12.1□□□□□ -0.47
TOP3B-209ENST00000442653 R3HDM1Q15032 1099 aaKnown RBP12.1□□□□□ -0.47
TOP3B-209ENST00000442653 EZH2Q15910 746 aaKnown RBP12.1□□□□□ -0.47
TOP3B-209ENST00000442653 FAM196AQ6ZSG2 479 aa12.1□□□□□ -0.47
TOP3B-209ENST00000442653 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
TOP3B-209ENST00000442653 CENPJQ9HC77 1338 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-209ENST00000442653 EVA1CP58658 441 aa12.09□□□□□ -0.47
TOP3B-209ENST00000442653 CAMKK2Q96RR4 588 aa12.09□□□□□ -0.47
TOP3B-209ENST00000442653 QRICH2Q9H0J4 1663 aa12.09□□□□□ -0.47
TOP3B-209ENST00000442653 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.47
TOP3B-209ENST00000442653 GCP02774 474 aa12.08□□□□□ -0.48
TOP3B-209ENST00000442653 NPM3O75607 178 aaKnown RBP12.07□□□□□ -0.48
TOP3B-209ENST00000442653 USP6P35125 1406 aa12.07□□□□□ -0.48
TOP3B-209ENST00000442653 NLRP13Q86W25 1043 aa12.07□□□□□ -0.48
TOP3B-209ENST00000442653 TCP11L2Q8N4U5 519 aa12.07□□□□□ -0.48
TOP3B-209ENST00000442653 APBA3O96018 575 aa12.06□□□□□ -0.48
TOP3B-209ENST00000442653 PDE3BQ13370 1112 aa12.06□□□□□ -0.48
TOP3B-209ENST00000442653 L3MBTL2Q969R5 705 aa12.06□□□□□ -0.48
TOP3B-209ENST00000442653 CABP1Q9NZU7 370 aa12.06□□□□□ -0.48
TOP3B-209ENST00000442653 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
TOP3B-209ENST00000442653 PIK3C2AO00443 1686 aa12.05□□□□□ -0.48
TOP3B-209ENST00000442653 RREB1Q92766 1687 aa12.05□□□□□ -0.48
TOP3B-209ENST00000442653 PARP4Q9UKK3 1724 aaKnown RBP12.05□□□□□ -0.48
TOP3B-209ENST00000442653 SLIT3O75094 1523 aa12.05□□□□□ -0.48
TOP3B-209ENST00000442653 BRD4O60885 1362 aaPredicted RBP12.05□□□□□ -0.48
TOP3B-209ENST00000442653 NUP188Q5SRE5 1749 aa12.04□□□□□ -0.48
TOP3B-209ENST00000442653 AATKQ6ZMQ8 1374 aa12.04□□□□□ -0.48
TOP3B-209ENST00000442653 CRB1P82279 1406 aa12.03□□□□□ -0.48
TOP3B-209ENST00000442653 ZBTB7CA1YPR0 619 aa12.03□□□□□ -0.48
TOP3B-209ENST00000442653 NLRP6P59044 892 aa12.03□□□□□ -0.48
TOP3B-209ENST00000442653 THRAP3Q9Y2W1 955 aaKnown RBP12.03□□□□□ -0.48
TOP3B-209ENST00000442653 TRPM1Q7Z4N2 1603 aa12.03□□□□□ -0.48
TOP3B-209ENST00000442653 PEAK1Q9H792 1746 aa12.03□□□□□ -0.48
TOP3B-209ENST00000442653 LRRC37A3O60309 1634 aa12.02□□□□□ -0.49
TOP3B-209ENST00000442653 SIN3AQ96ST3 1273 aa12.02□□□□□ -0.49
TOP3B-209ENST00000442653 COL18A1P39060 1754 aa12.02□□□□□ -0.49
TOP3B-209ENST00000442653 AXIN2Q9Y2T1 843 aa12.01□□□□□ -0.49
TOP3B-209ENST00000442653 EVC2Q86UK5 1308 aa12.01□□□□□ -0.49
TOP3B-209ENST00000442653 OVOS2A0A0G2JMS6 1433 aa12□□□□□ -0.49
TOP3B-209ENST00000442653 OVOS2A0A0J9YW53 1432 aa12□□□□□ -0.49
TOP3B-209ENST00000442653 CPSF1Q10570 1443 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms