RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 SENP3Q9H4L4 574 aaPredicted RBP21.01■□□□□ 0.95
SEMA3B-207ENST00000441915 EXOSC9Q06265 439 aaKnown RBP21.01■□□□□ 0.95
SEMA3B-207ENST00000441915 NLRP1Q9C000 1473 aa21.01■□□□□ 0.95
SEMA3B-207ENST00000441915 FYB1O15117 783 aa21■□□□□ 0.95
SEMA3B-207ENST00000441915 POGKQ9P215 609 aa21■□□□□ 0.95
SEMA3B-207ENST00000441915 MINK1Q8N4C8 1332 aaPredicted RBP20.99■□□□□ 0.95
SEMA3B-207ENST00000441915 PRAM1Q96QH2 718 aa20.99■□□□□ 0.95
SEMA3B-207ENST00000441915 TRIM35Q9UPQ4 493 aa20.99■□□□□ 0.95
SEMA3B-207ENST00000441915 COL3A1P02461 1466 aaPredicted RBP20.99■□□□□ 0.95
SEMA3B-207ENST00000441915 PTPRMP28827 1452 aa20.99■□□□□ 0.95
SEMA3B-207ENST00000441915 MED14O60244 1454 aa20.98■□□□□ 0.95
SEMA3B-207ENST00000441915 IL16Q14005 1332 aa20.98■□□□□ 0.95
SEMA3B-207ENST00000441915 TRIM27P14373 513 aa20.97■□□□□ 0.95
SEMA3B-207ENST00000441915 TBC1D32Q96NH3 1257 aa20.97■□□□□ 0.95
SEMA3B-207ENST00000441915 PNNQ9H307 717 aaKnown RBP20.97■□□□□ 0.95
SEMA3B-207ENST00000441915 DDX19BQ9UMR2 479 aa20.97■□□□□ 0.95
SEMA3B-207ENST00000441915 MYO5BQ9ULV0 1848 aa20.97■□□□□ 0.95
SEMA3B-207ENST00000441915 HDGFL2Q7Z4V5 671 aaPredicted RBP20.97■□□□□ 0.95
SEMA3B-207ENST00000441915 YTHDC2Q9H6S0 1430 aaKnown RBP20.97■□□□□ 0.95
SEMA3B-207ENST00000441915 SSH1Q8WYL5 1049 aa20.96■□□□□ 0.95
SEMA3B-207ENST00000441915 ANKRD26Q9UPS8 1709 aa20.96■□□□□ 0.95
SEMA3B-207ENST00000441915 DIAPH1O60610 1272 aaKnown RBP20.96■□□□□ 0.95
SEMA3B-207ENST00000441915 RIPK4P57078 832 aa20.96■□□□□ 0.95
SEMA3B-207ENST00000441915 ATF7IPQ6VMQ6 1270 aa20.96■□□□□ 0.95
SEMA3B-207ENST00000441915 TMEM131LA2VDJ0 1609 aa20.95■□□□□ 0.95
SEMA3B-207ENST00000441915 RICTORQ6R327 1708 aa20.95■□□□□ 0.94
SEMA3B-207ENST00000441915 ITPRIPQ8IWB1 547 aa20.95■□□□□ 0.94
SEMA3B-207ENST00000441915 CD163L1Q9NR16 1453 aa20.95■□□□□ 0.94
SEMA3B-207ENST00000441915 PREX1Q8TCU6 1659 aa20.94■□□□□ 0.94
SEMA3B-207ENST00000441915 YEATS2Q9ULM3 1422 aa20.94■□□□□ 0.94
SEMA3B-207ENST00000441915 CLTCQ00610 1675 aaKnown RBP20.93■□□□□ 0.94
SEMA3B-207ENST00000441915 HDAC1Q13547 482 aaPredicted RBP20.93■□□□□ 0.94
SEMA3B-207ENST00000441915 SLKQ9H2G2 1235 aaPredicted RBP20.93■□□□□ 0.94
SEMA3B-207ENST00000441915 NOB1Q9ULX3 412 aaKnown RBP20.92■□□□□ 0.94
SEMA3B-207ENST00000441915 PNPLA6Q8IY17 1366 aa20.92■□□□□ 0.94
SEMA3B-207ENST00000441915 CDK19Q9BWU1 502 aa20.91■□□□□ 0.94
SEMA3B-207ENST00000441915 KIF16BQ96L93 1317 aa20.9■□□□□ 0.94
SEMA3B-207ENST00000441915 IPO8O15397 1037 aaKnown RBP20.9■□□□□ 0.94
SEMA3B-207ENST00000441915 CABP1Q9NZU7 370 aa20.9■□□□□ 0.94
SEMA3B-207ENST00000441915 FCHSD2O94868 740 aa20.89■□□□□ 0.93
SEMA3B-207ENST00000441915 STAG3Q9UJ98 1225 aa20.89■□□□□ 0.93
SEMA3B-207ENST00000441915 TBC1D2Q9BYX2 928 aa20.88■□□□□ 0.93
SEMA3B-207ENST00000441915 BRPF3Q9ULD4 1205 aa20.88■□□□□ 0.93
SEMA3B-207ENST00000441915 TMEM57Q8N5G2 664 aa20.87■□□□□ 0.93
SEMA3B-207ENST00000441915 ANTXR1Q9H6X2 564 aa20.87■□□□□ 0.93
SEMA3B-207ENST00000441915 ALKQ9UM73 1620 aa20.87■□□□□ 0.93
SEMA3B-207ENST00000441915 ARHGEF40Q8TER5 1519 aa20.87■□□□□ 0.93
SEMA3B-207ENST00000441915 FBXO31Q5XUX0 539 aaPredicted RBP20.87■□□□□ 0.93
SEMA3B-207ENST00000441915 ALDH1L2Q3SY69 923 aa20.86■□□□□ 0.93
SEMA3B-207ENST00000441915 SMC5Q8IY18 1101 aa20.86■□□□□ 0.93
SEMA3B-207ENST00000441915 ZBTB40Q9NUA8 1239 aa20.86■□□□□ 0.93
SEMA3B-207ENST00000441915 KIF20BQ96Q89 1820 aa20.85■□□□□ 0.93
SEMA3B-207ENST00000441915 C22orf23Q9BZE7 217 aa20.84■□□□□ 0.93
SEMA3B-207ENST00000441915 ZNF428Q96B54 188 aa20.84■□□□□ 0.93
SEMA3B-207ENST00000441915 PRKAR2BP31323 418 aa20.83■□□□□ 0.93
SEMA3B-207ENST00000441915 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.83■□□□□ 0.93
SEMA3B-207ENST00000441915 MFAP1P55081 439 aaKnown RBP20.83■□□□□ 0.92
SEMA3B-207ENST00000441915 CDC42BPGQ6DT37 1551 aa20.82■□□□□ 0.92
SEMA3B-207ENST00000441915 LRRC7Q96NW7 1537 aa20.82■□□□□ 0.92
SEMA3B-207ENST00000441915 RSPH6AQ9H0K4 717 aa20.82■□□□□ 0.92
SEMA3B-207ENST00000441915 POLKQ9UBT6 870 aa20.82■□□□□ 0.92
SEMA3B-207ENST00000441915 FAM135BQ49AJ0 1406 aa20.81■□□□□ 0.92
SEMA3B-207ENST00000441915 ATP7BP35670 1465 aa20.79■□□□□ 0.92
SEMA3B-207ENST00000441915 BRPF1P55201 1214 aaPredicted RBP20.79■□□□□ 0.92
SEMA3B-207ENST00000441915 CALD1Q05682 793 aaKnown RBP20.78■□□□□ 0.92
SEMA3B-207ENST00000441915 FBLN1P23142 703 aa20.78■□□□□ 0.92
SEMA3B-207ENST00000441915 WAPLQ7Z5K2 1190 aa20.78■□□□□ 0.92
SEMA3B-207ENST00000441915 PPIP5K1Q6PFW1 1433 aa20.78■□□□□ 0.92
SEMA3B-207ENST00000441915 NUCB1Q02818 461 aa20.77■□□□□ 0.92
SEMA3B-207ENST00000441915 DLC1Q96QB1 1528 aa20.77■□□□□ 0.92
SEMA3B-207ENST00000441915 NFE2L2Q16236 605 aa20.77■□□□□ 0.92
SEMA3B-207ENST00000441915 CHMP4BQ9H444 224 aaKnown RBP20.77■□□□□ 0.91
SEMA3B-207ENST00000441915 HMOX1P09601 288 aa20.76■□□□□ 0.91
SEMA3B-207ENST00000441915 SPRYD3Q8NCJ5 442 aa20.75■□□□□ 0.91
SEMA3B-207ENST00000441915 PHACTR3Q96KR7 559 aa20.75■□□□□ 0.91
SEMA3B-207ENST00000441915 MAP2P11137 1827 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-207ENST00000441915 CHD1LQ86WJ1 897 aa20.74■□□□□ 0.91
SEMA3B-207ENST00000441915 LNPKQ9C0E8 428 aa20.74■□□□□ 0.91
SEMA3B-207ENST00000441915 GNAI1P63096 354 aa20.74■□□□□ 0.91
SEMA3B-207ENST00000441915 ARHGAP45Q92619 1136 aa20.74■□□□□ 0.91
SEMA3B-207ENST00000441915 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
SEMA3B-207ENST00000441915 VAMP4O75379 141 aa20.73■□□□□ 0.91
SEMA3B-207ENST00000441915 EIF5BO60841 1220 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-207ENST00000441915 IFT57Q9NWB7 429 aa20.72■□□□□ 0.91
SEMA3B-207ENST00000441915 A2ML1A8K2U0 1454 aa20.72■□□□□ 0.91
SEMA3B-207ENST00000441915 HSCBQ8IWL3 235 aa20.72■□□□□ 0.91
SEMA3B-207ENST00000441915 CHMP5Q9NZZ3 219 aa20.72■□□□□ 0.91
SEMA3B-207ENST00000441915 EMILIN1Q9Y6C2 1016 aa20.72■□□□□ 0.91
SEMA3B-207ENST00000441915 ZBTB7BO15156 539 aaPredicted RBP20.71■□□□□ 0.91
SEMA3B-207ENST00000441915 THUMPD2Q9BTF0 503 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-207ENST00000441915 EDC4Q6P2E9 1401 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-207ENST00000441915 RIMS2Q9UQ26 1411 aa20.71■□□□□ 0.91
SEMA3B-207ENST00000441915 MRPL50Q8N5N7 158 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-207ENST00000441915 IL13P35225 146 aa20.7■□□□□ 0.9
SEMA3B-207ENST00000441915 GCC1Q96CN9 775 aa20.7■□□□□ 0.9
SEMA3B-207ENST00000441915 WASLO00401 505 aaPredicted RBP20.69■□□□□ 0.9
SEMA3B-207ENST00000441915 CPSF1Q10570 1443 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-207ENST00000441915 RBM25P49756 843 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-207ENST00000441915 TSPYL6Q8N831 410 aa20.69■□□□□ 0.9
SEMA3B-207ENST00000441915 PTCH1Q13635 1447 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms