RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 GPR162Q16538 588 aa9.65□□□□□ -0.86
HDAC6-210ENST00000441703 ATF5Q9Y2D1 282 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-210ENST00000441703 DLC1Q96QB1 1528 aa9.65□□□□□ -0.86
HDAC6-210ENST00000441703 FMN2Q9NZ56 1722 aa9.64□□□□□ -0.87
HDAC6-210ENST00000441703 CASZ1Q86V15 1759 aa9.63□□□□□ -0.87
HDAC6-210ENST00000441703 SPATA31A1Q5TZJ5 1347 aa9.63□□□□□ -0.87
HDAC6-210ENST00000441703 WAPLQ7Z5K2 1190 aa9.63□□□□□ -0.87
HDAC6-210ENST00000441703 BCL11BQ9C0K0 894 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-210ENST00000441703 PRDM11Q9NQV5 511 aa9.63□□□□□ -0.87
HDAC6-210ENST00000441703 STRN4Q9NRL3 753 aa9.63□□□□□ -0.87
HDAC6-210ENST00000441703 STK26Q9P289 416 aa9.63□□□□□ -0.87
HDAC6-210ENST00000441703 SLC34A2O95436 690 aa9.62□□□□□ -0.87
HDAC6-210ENST00000441703 PTGER2P43116 358 aa9.62□□□□□ -0.87
HDAC6-210ENST00000441703 USP35Q9P2H5 1018 aa9.62□□□□□ -0.87
HDAC6-210ENST00000441703 PPLO60437 1756 aa9.61□□□□□ -0.87
HDAC6-210ENST00000441703 C11orf95C9JLR9 678 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-210ENST00000441703 CAPN15O75808 1086 aa9.61□□□□□ -0.87
HDAC6-210ENST00000441703 HSPA6P17066 643 aa9.61□□□□□ -0.87
HDAC6-210ENST00000441703 ANO8Q9HCE9 1232 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-210ENST00000441703 CEP350Q5VT06 3117 aa9.61□□□□□ -0.87
HDAC6-210ENST00000441703 NRXN1Q9ULB1 1477 aa9.6□□□□□ -0.87
HDAC6-210ENST00000441703 KNDC1Q76NI1 1749 aa9.6□□□□□ -0.87
HDAC6-210ENST00000441703 UTRNP46939 3433 aa9.6□□□□□ -0.87
HDAC6-210ENST00000441703 STK32BQ9NY57 414 aa9.6□□□□□ -0.87
HDAC6-210ENST00000441703 ACIN1Q9UKV3 1341 aaKnown RBP9.59□□□□□ -0.87
HDAC6-210ENST00000441703 EVA1CP58658 441 aa9.59□□□□□ -0.87
HDAC6-210ENST00000441703 ARXQ96QS3 562 aa9.59□□□□□ -0.87
HDAC6-210ENST00000441703 PDGFDQ9GZP0 370 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-210ENST00000441703 MTFR1LQ9H019 292 aa9.59□□□□□ -0.87
HDAC6-210ENST00000441703 RPGRIP1LQ68CZ1 1315 aa9.58□□□□□ -0.88
HDAC6-210ENST00000441703 TECPR2O15040 1411 aa9.58□□□□□ -0.88
HDAC6-210ENST00000441703 RGPD3A6NKT7 1758 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-210ENST00000441703 RGPD8O14715 1765 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-210ENST00000441703 RGPD4Q7Z3J3 1758 aa9.58□□□□□ -0.88
HDAC6-210ENST00000441703 PLSCR1O15162 318 aa9.58□□□□□ -0.88
HDAC6-210ENST00000441703 BARGINQ6ZT62 677 aa9.58□□□□□ -0.88
HDAC6-210ENST00000441703 KLHL34Q8N239 644 aa9.58□□□□□ -0.88
HDAC6-210ENST00000441703 PMFBP1Q8TBY8 1022 aa9.58□□□□□ -0.88
HDAC6-210ENST00000441703 IFT172Q9UG01 1749 aa9.58□□□□□ -0.88
HDAC6-210ENST00000441703 GPRASP1Q5JY77 1395 aa9.58□□□□□ -0.88
HDAC6-210ENST00000441703 PLEKHH1Q9ULM0 1364 aa9.58□□□□□ -0.88
HDAC6-210ENST00000441703 SHANK3Q9BYB0 1731 aa9.57□□□□□ -0.88
HDAC6-210ENST00000441703 CHRNA2Q15822 529 aa9.56□□□□□ -0.88
HDAC6-210ENST00000441703 OVOS2A0A0G2JMS6 1433 aa9.56□□□□□ -0.88
HDAC6-210ENST00000441703 OVOS2A0A0J9YW53 1432 aa9.56□□□□□ -0.88
HDAC6-210ENST00000441703 OVOS2Q6IE36 1432 aa9.56□□□□□ -0.88
HDAC6-210ENST00000441703 KIAA0232Q92628 1395 aa9.55□□□□□ -0.88
HDAC6-210ENST00000441703 MAP3K5Q99683 1374 aa9.55□□□□□ -0.88
HDAC6-210ENST00000441703 LOC105371045A0A1W2PR82 267 aa9.55□□□□□ -0.88
HDAC6-210ENST00000441703 PAK3O75914 559 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-210ENST00000441703 TCP11L2Q8N4U5 519 aa9.55□□□□□ -0.88
HDAC6-210ENST00000441703 GPBP1L1Q9HC44 474 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-210ENST00000441703 ABCC11Q96J66 1382 aa9.54□□□□□ -0.88
HDAC6-210ENST00000441703 SLC15A2Q16348 729 aa9.54□□□□□ -0.88
HDAC6-210ENST00000441703 SSH2Q76I76 1423 aa9.54□□□□□ -0.88
HDAC6-210ENST00000441703 ALS2Q96Q42 1657 aa9.54□□□□□ -0.88
HDAC6-210ENST00000441703 TRPM3Q9HCF6 1732 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-210ENST00000441703 SGIP1Q9BQI5 828 aa9.53□□□□□ -0.88
HDAC6-210ENST00000441703 ATP10DQ9P241 1426 aa9.53□□□□□ -0.88
HDAC6-210ENST00000441703 GRIN3BO60391 1043 aa9.52□□□□□ -0.89
HDAC6-210ENST00000441703 ZC3H6P61129 1189 aaKnown RBP9.52□□□□□ -0.89
HDAC6-210ENST00000441703 TMEM132EQ6IEE7 984 aa9.52□□□□□ -0.89
HDAC6-210ENST00000441703 THRAP3Q9Y2W1 955 aaKnown RBP9.52□□□□□ -0.89
HDAC6-210ENST00000441703 ANKARQ7Z5J8 1434 aa9.51□□□□□ -0.89
HDAC6-210ENST00000441703 POLD1P28340 1107 aa9.51□□□□□ -0.89
HDAC6-210ENST00000441703 PRELPP51888 382 aa9.51□□□□□ -0.89
HDAC6-210ENST00000441703 SAFB2Q14151 953 aaKnown RBP eCLIP9.51□□□□□ -0.89
HDAC6-210ENST00000441703 LARP1Q6PKG0 1096 aaKnown RBP9.51□□□□□ -0.89
HDAC6-210ENST00000441703 TNS4Q8IZW8 715 aa9.51□□□□□ -0.89
HDAC6-210ENST00000441703 PARP4Q9UKK3 1724 aaKnown RBP9.51□□□□□ -0.89
HDAC6-210ENST00000441703 CRYBG1Q9Y4K1 1723 aa9.51□□□□□ -0.89
HDAC6-210ENST00000441703 YTHDC2Q9H6S0 1430 aaKnown RBP9.5□□□□□ -0.89
HDAC6-210ENST00000441703 APLP1P51693 650 aa9.5□□□□□ -0.89
HDAC6-210ENST00000441703 TXNRD1Q16881 649 aa9.5□□□□□ -0.89
HDAC6-210ENST00000441703 NGDNQ8NEJ9 315 aaKnown RBP9.5□□□□□ -0.89
HDAC6-210ENST00000441703 ZNF526Q8TF50 670 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-210ENST00000441703 PCDH10Q9P2E7 1040 aa9.5□□□□□ -0.89
HDAC6-210ENST00000441703 ADGRF5Q8IZF2 1346 aa9.5□□□□□ -0.89
HDAC6-210ENST00000441703 DHX57Q6P158 1386 aaKnown RBP9.5□□□□□ -0.89
HDAC6-210ENST00000441703 ITGAEP38570 1179 aa9.49□□□□□ -0.89
HDAC6-210ENST00000441703 PROM2Q8N271 834 aa9.49□□□□□ -0.89
HDAC6-210ENST00000441703 SIRT1Q96EB6 747 aa9.49□□□□□ -0.89
HDAC6-210ENST00000441703 SBF2Q86WG5 1849 aa9.49□□□□□ -0.89
HDAC6-210ENST00000441703 CENPBP07199 599 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-210ENST00000441703 DDB1Q16531 1140 aa9.48□□□□□ -0.89
HDAC6-210ENST00000441703 COL13A1Q5TAT6 717 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-210ENST00000441703 POGKQ9P215 609 aa9.48□□□□□ -0.89
HDAC6-210ENST00000441703 PHRF1Q9P1Y6 1649 aaKnown RBP9.48□□□□□ -0.89
HDAC6-210ENST00000441703 EIF3AQ14152 1382 aaKnown RBP9.48□□□□□ -0.89
HDAC6-210ENST00000441703 PEAK1Q9H792 1746 aa9.48□□□□□ -0.89
HDAC6-210ENST00000441703 ATP7BP35670 1465 aa9.47□□□□□ -0.89
HDAC6-210ENST00000441703 PRAM1Q96QH2 718 aa9.47□□□□□ -0.89
HDAC6-210ENST00000441703 PIK3C2GO75747 1445 aa9.47□□□□□ -0.89
HDAC6-210ENST00000441703 PTF1AQ7RTS3 328 aa9.46□□□□□ -0.9
HDAC6-210ENST00000441703 TOPAZ1Q8N9V7 1692 aa9.45□□□□□ -0.9
HDAC6-210ENST00000441703 NEUROD1Q13562 356 aa9.45□□□□□ -0.9
HDAC6-210ENST00000441703 RGL3Q3MIN7 710 aa9.45□□□□□ -0.9
HDAC6-210ENST00000441703 NUTM2GQ5VZR2 741 aa9.45□□□□□ -0.9
HDAC6-210ENST00000441703 NLGN2Q8NFZ4 835 aa9.45□□□□□ -0.9
HDAC6-210ENST00000441703 ANKRD30BQ9BXX2 1392 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms