RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 TRAK2O60296 914 aa9.82□□□□□ -0.84
PFDN4-202ENST00000441080 GPR37L1O60883 481 aa9.82□□□□□ -0.84
PFDN4-202ENST00000441080 IFFO2Q5TF58 517 aa9.82□□□□□ -0.84
PFDN4-202ENST00000441080 PTCRAQ6ISU1 281 aaPredicted RBP9.82□□□□□ -0.84
PFDN4-202ENST00000441080 ANKLE1Q8NAG6 615 aa9.82□□□□□ -0.84
PFDN4-202ENST00000441080 ARMC2Q8NEN0 867 aa9.82□□□□□ -0.84
PFDN4-202ENST00000441080 PLA2G2EQ9NZK7 142 aa9.82□□□□□ -0.84
PFDN4-202ENST00000441080 FNBP4Q8N3X1 1017 aaPredicted RBP9.81□□□□□ -0.84
PFDN4-202ENST00000441080 ZC3H4Q9UPT8 1303 aaKnown RBP9.81□□□□□ -0.84
PFDN4-202ENST00000441080 IRF5Q13568 498 aa9.8□□□□□ -0.84
PFDN4-202ENST00000441080 SUPT5HO00267 1087 aaKnown RBP9.79□□□□□ -0.84
PFDN4-202ENST00000441080 NBPF14Q5TI25 921 aa9.79□□□□□ -0.84
PFDN4-202ENST00000441080 ZNF330Q9Y3S2 320 aaPredicted RBP9.79□□□□□ -0.84
PFDN4-202ENST00000441080 ZBTB24O43167 697 aaPredicted RBP9.78□□□□□ -0.84
PFDN4-202ENST00000441080 WASHC4Q2M389 1173 aa9.78□□□□□ -0.84
PFDN4-202ENST00000441080 PLA2G2CQ5R387 149 aa9.78□□□□□ -0.84
PFDN4-202ENST00000441080 GPKOWQ92917 476 aaPredicted RBP eCLIP9.77□□□□□ -0.85
PFDN4-202ENST00000441080 VAC14Q08AM6 782 aa9.75□□□□□ -0.85
PFDN4-202ENST00000441080 LINC01559Q495D7 138 aa9.75□□□□□ -0.85
PFDN4-202ENST00000441080 BAP1Q92560 729 aa9.75□□□□□ -0.85
PFDN4-202ENST00000441080 A0A0G2JS52 829 aa9.74□□□□□ -0.85
PFDN4-202ENST00000441080 ZBBXA8MT70 800 aa9.74□□□□□ -0.85
PFDN4-202ENST00000441080 PTK2Q05397 1052 aa9.74□□□□□ -0.85
PFDN4-202ENST00000441080 TRIM32Q13049 653 aa9.74□□□□□ -0.85
PFDN4-202ENST00000441080 PDXDC2PQ6P474 469 aa9.74□□□□□ -0.85
PFDN4-202ENST00000441080 ZNF777Q9ULD5 760 aaPredicted RBP9.74□□□□□ -0.85
PFDN4-202ENST00000441080 ARID3CA6NKF2 412 aa9.73□□□□□ -0.85
PFDN4-202ENST00000441080 FBXO45P0C2W1 286 aa9.73□□□□□ -0.85
PFDN4-202ENST00000441080 NR1H3Q13133 447 aa9.73□□□□□ -0.85
PFDN4-202ENST00000441080 ZNF511Q8NB15 262 aa9.73□□□□□ -0.85
PFDN4-202ENST00000441080 GPSM3Q9Y4H4 160 aa9.73□□□□□ -0.85
PFDN4-202ENST00000441080 POM121CA8CG34 1229 aa9.72□□□□□ -0.85
PFDN4-202ENST00000441080 RPIAP49247 311 aa9.72□□□□□ -0.85
PFDN4-202ENST00000441080 AGERQ15109 404 aa9.71□□□□□ -0.86
PFDN4-202ENST00000441080 SH3BP5LQ7L8J4 393 aa9.71□□□□□ -0.86
PFDN4-202ENST00000441080 ARHGAP9Q9BRR9 750 aa9.71□□□□□ -0.86
PFDN4-202ENST00000441080 BPHLQ86WA6 291 aaPredicted RBP9.7□□□□□ -0.86
PFDN4-202ENST00000441080 MAGEB6P1A0A0J9YX57 407 aa9.69□□□□□ -0.86
PFDN4-202ENST00000441080 CD2BP2O95400 341 aaKnown RBP9.69□□□□□ -0.86
PFDN4-202ENST00000441080 SH3BP2P78314 561 aa9.69□□□□□ -0.86
PFDN4-202ENST00000441080 LIAT1Q6ZQX7 453 aa9.69□□□□□ -0.86
PFDN4-202ENST00000441080 FOXJ1Q92949 421 aa9.69□□□□□ -0.86
PFDN4-202ENST00000441080 CARD14Q9BXL6 1004 aa9.69□□□□□ -0.86
PFDN4-202ENST00000441080 SLC19A1P41440 591 aa9.68□□□□□ -0.86
PFDN4-202ENST00000441080 WNT7BP56706 349 aa9.68□□□□□ -0.86
PFDN4-202ENST00000441080 EIF4G2P78344 907 aaKnown RBP eCLIP9.68□□□□□ -0.86
PFDN4-202ENST00000441080 ZBTB33Q86T24 672 aa9.68□□□□□ -0.86
PFDN4-202ENST00000441080 OCSTAMPQ9BR26 566 aa9.68□□□□□ -0.86
PFDN4-202ENST00000441080 SOX11P35716 441 aa9.67□□□□□ -0.86
PFDN4-202ENST00000441080 SH3RF1Q7Z6J0 888 aa9.67□□□□□ -0.86
PFDN4-202ENST00000441080 ADAM32Q8TC27 787 aa9.67□□□□□ -0.86
PFDN4-202ENST00000441080 GLMNQ92990 594 aa9.67□□□□□ -0.86
PFDN4-202ENST00000441080 EMID1Q96A84 441 aaPredicted RBP9.67□□□□□ -0.86
PFDN4-202ENST00000441080 C1orf115Q9H7X2 142 aa9.67□□□□□ -0.86
PFDN4-202ENST00000441080 SKOR1P84550 965 aa9.66□□□□□ -0.86
PFDN4-202ENST00000441080 CALR3Q96L12 384 aaKnown RBP9.66□□□□□ -0.86
PFDN4-202ENST00000441080 SEMA3FQ13275 785 aa9.65□□□□□ -0.86
PFDN4-202ENST00000441080 C4orf48Q5BLP8 95 aa9.65□□□□□ -0.86
PFDN4-202ENST00000441080 HDGFL1Q5TGJ6 251 aa9.65□□□□□ -0.86
PFDN4-202ENST00000441080 PCDHB9Q9Y5E1 797 aa9.65□□□□□ -0.86
PFDN4-202ENST00000441080 ADAMTS19Q8TE59 1207 aa9.64□□□□□ -0.87
PFDN4-202ENST00000441080 ZNF592Q92610 1267 aa9.64□□□□□ -0.87
PFDN4-202ENST00000441080 ALG2Q9H553 416 aa9.64□□□□□ -0.87
PFDN4-202ENST00000441080 ERFEQ4G0M1 354 aa9.63□□□□□ -0.87
PFDN4-202ENST00000441080 DZIP3Q86Y13 1208 aaKnown RBP9.63□□□□□ -0.87
PFDN4-202ENST00000441080 PRKD2Q9BZL6 878 aa9.63□□□□□ -0.87
PFDN4-202ENST00000441080 VARSP26640 1264 aaKnown RBP9.62□□□□□ -0.87
PFDN4-202ENST00000441080 RC3H1Q5TC82 1133 aaKnown RBP9.62□□□□□ -0.87
PFDN4-202ENST00000441080 SPRYD7Q5W111 196 aa9.62□□□□□ -0.87
PFDN4-202ENST00000441080 CCDC82Q8N4S0 544 aa9.62□□□□□ -0.87
PFDN4-202ENST00000441080 EHBP1Q8NDI1 1231 aa9.62□□□□□ -0.87
PFDN4-202ENST00000441080 SLC10A4Q96EP9 437 aa9.62□□□□□ -0.87
PFDN4-202ENST00000441080 CCDC97Q96F63 343 aaPredicted RBP9.62□□□□□ -0.87
PFDN4-202ENST00000441080 C1QTNF2Q9BXJ5 285 aa9.62□□□□□ -0.87
PFDN4-202ENST00000441080 MCCD1P59942 119 aaPredicted RBP9.61□□□□□ -0.87
PFDN4-202ENST00000441080 V9GY48 417 aaPredicted RBP9.61□□□□□ -0.87
PFDN4-202ENST00000441080 ZNF697Q5TEC3 545 aa9.6□□□□□ -0.87
PFDN4-202ENST00000441080 FAM174AQ8TBP5 190 aa9.6□□□□□ -0.87
PFDN4-202ENST00000441080 ZNF598Q86UK7 904 aaKnown RBP9.59□□□□□ -0.87
PFDN4-202ENST00000441080 TRMT44Q8IYL2 757 aaKnown RBP9.59□□□□□ -0.87
PFDN4-202ENST00000441080 ARID3AQ99856 593 aa9.59□□□□□ -0.87
PFDN4-202ENST00000441080 SERPINA10Q9UK55 444 aa9.59□□□□□ -0.87
PFDN4-202ENST00000441080 WNT7AO00755 349 aa9.58□□□□□ -0.88
PFDN4-202ENST00000441080 CEP126Q9P2H0 1117 aa9.57□□□□□ -0.88
PFDN4-202ENST00000441080 CDV3Q9UKY7 258 aaKnown RBP9.57□□□□□ -0.88
PFDN4-202ENST00000441080 NBPF20Q3BBV1 942 aa9.56□□□□□ -0.88
PFDN4-202ENST00000441080 MRGPRX2Q96LB1 330 aa9.56□□□□□ -0.88
PFDN4-202ENST00000441080 FOXC1Q12948 553 aa9.55□□□□□ -0.88
PFDN4-202ENST00000441080 ARID5BQ14865 1188 aa9.55□□□□□ -0.88
PFDN4-202ENST00000441080 SLFNL1Q499Z3 407 aa9.55□□□□□ -0.88
PFDN4-202ENST00000441080 UCN2Q96RP3 112 aa9.55□□□□□ -0.88
PFDN4-202ENST00000441080 VASH1Q7L8A9 365 aaPredicted RBP9.54□□□□□ -0.88
PFDN4-202ENST00000441080 MAP4K5Q9Y4K4 846 aa9.54□□□□□ -0.88
PFDN4-202ENST00000441080 TLL2Q9Y6L7 1015 aa9.54□□□□□ -0.88
PFDN4-202ENST00000441080 SIAH2O43255 324 aa9.53□□□□□ -0.88
PFDN4-202ENST00000441080 RNF135Q8IUD6 432 aa9.53□□□□□ -0.88
PFDN4-202ENST00000441080 PKD2L1Q9P0L9 805 aa9.53□□□□□ -0.88
PFDN4-202ENST00000441080 PIK3CDO00329 1044 aa9.52□□□□□ -0.89
PFDN4-202ENST00000441080 GIGYF1O75420 1035 aaPredicted RBP9.52□□□□□ -0.89
PFDN4-202ENST00000441080 KCTD15Q96SI1 283 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms