RNA–Protein interactions for RNA: ENST00000440284.6

ACSM3-202, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 1 (best) BASIC

Gene ACSM3, Length 1,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-202ENST00000440284 CCDC61Q9Y6R9 512 aa13.35□□□□□ -0.27
ACSM3-202ENST00000440284 IQSEC2Q5JU85 1478 aa13.35□□□□□ -0.27
ACSM3-202ENST00000440284 KIF20BQ96Q89 1820 aa13.35□□□□□ -0.27
ACSM3-202ENST00000440284 THEMISQ8N1K5 641 aaPredicted RBP13.34□□□□□ -0.27
ACSM3-202ENST00000440284 NUDT16Q96DE0 195 aaKnown RBP13.34□□□□□ -0.27
ACSM3-202ENST00000440284 CPSF1Q10570 1443 aaKnown RBP13.34□□□□□ -0.27
ACSM3-202ENST00000440284 PPIP5K1Q6PFW1 1433 aa13.34□□□□□ -0.27
ACSM3-202ENST00000440284 ADAMTS13Q76LX8 1427 aa13.34□□□□□ -0.27
ACSM3-202ENST00000440284 SLIT1O75093 1534 aa13.34□□□□□ -0.27
ACSM3-202ENST00000440284 DIAPH1O60610 1272 aaKnown RBP13.34□□□□□ -0.27
ACSM3-202ENST00000440284 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
ACSM3-202ENST00000440284 PNPLA6Q8IY17 1366 aa13.33□□□□□ -0.27
ACSM3-202ENST00000440284 ARHGAP23Q9P227 1491 aa13.33□□□□□ -0.27
ACSM3-202ENST00000440284 TRHP20396 242 aaPredicted RBP13.33□□□□□ -0.28
ACSM3-202ENST00000440284 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
ACSM3-202ENST00000440284 MYH16Q9H6N6 1097 aa13.33□□□□□ -0.28
ACSM3-202ENST00000440284 TBX22Q9Y458 520 aa13.33□□□□□ -0.28
ACSM3-202ENST00000440284 MAPK8IP3Q9UPT6 1336 aa13.32□□□□□ -0.28
ACSM3-202ENST00000440284 COL3A1P02461 1466 aaPredicted RBP13.32□□□□□ -0.28
ACSM3-202ENST00000440284 PLIN1O60240 522 aa13.32□□□□□ -0.28
ACSM3-202ENST00000440284 FER1L4A9Z1Z3 1794 aa13.31□□□□□ -0.28
ACSM3-202ENST00000440284 C3P01024 1663 aa13.31□□□□□ -0.28
ACSM3-202ENST00000440284 CDC42BPGQ6DT37 1551 aa13.31□□□□□ -0.28
ACSM3-202ENST00000440284 NEFMP07197 916 aa13.31□□□□□ -0.28
ACSM3-202ENST00000440284 FANCIQ9NVI1 1328 aa13.31□□□□□ -0.28
ACSM3-202ENST00000440284 ADGRB2O60241 1585 aa13.31□□□□□ -0.28
ACSM3-202ENST00000440284 AATKQ6ZMQ8 1374 aa13.3□□□□□ -0.28
ACSM3-202ENST00000440284 TCERG1O14776 1098 aaKnown RBP13.3□□□□□ -0.28
ACSM3-202ENST00000440284 U2SURPO15042 1029 aaKnown RBP13.3□□□□□ -0.28
ACSM3-202ENST00000440284 CT47B1P0C2W7 299 aaPredicted RBP13.3□□□□□ -0.28
ACSM3-202ENST00000440284 LTKP29376 864 aa13.3□□□□□ -0.28
ACSM3-202ENST00000440284 CEBPAP49715 358 aaPredicted RBP13.3□□□□□ -0.28
ACSM3-202ENST00000440284 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
ACSM3-202ENST00000440284 DIP2AQ14689 1571 aa13.3□□□□□ -0.28
ACSM3-202ENST00000440284 PDE3AQ14432 1141 aa13.29□□□□□ -0.28
ACSM3-202ENST00000440284 NEUROD2Q15784 382 aa13.29□□□□□ -0.28
ACSM3-202ENST00000440284 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
ACSM3-202ENST00000440284 COG3Q96JB2 828 aa13.29□□□□□ -0.28
ACSM3-202ENST00000440284 FCHSD2O94868 740 aa13.29□□□□□ -0.28
ACSM3-202ENST00000440284 AAMPQ13685 434 aa13.29□□□□□ -0.28
ACSM3-202ENST00000440284 IL16Q14005 1332 aa13.28□□□□□ -0.28
ACSM3-202ENST00000440284 ROBO2Q9HCK4 1378 aa13.28□□□□□ -0.28
ACSM3-202ENST00000440284 PLEKHG3A1L390 1219 aa13.28□□□□□ -0.28
ACSM3-202ENST00000440284 PLEKHF1Q96S99 279 aa13.28□□□□□ -0.28
ACSM3-202ENST00000440284 RRP7AQ9Y3A4 280 aaKnown RBP13.28□□□□□ -0.28
ACSM3-202ENST00000440284 MS4A1P11836 297 aa13.27□□□□□ -0.29
ACSM3-202ENST00000440284 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
ACSM3-202ENST00000440284 POLKQ9UBT6 870 aa13.27□□□□□ -0.29
ACSM3-202ENST00000440284 PIK3R4Q99570 1358 aa13.26□□□□□ -0.29
ACSM3-202ENST00000440284 PTCH1Q13635 1447 aa13.26□□□□□ -0.29
ACSM3-202ENST00000440284 MON2Q7Z3U7 1717 aa13.26□□□□□ -0.29
ACSM3-202ENST00000440284 CENPQQ7L2Z9 268 aaPredicted RBP13.26□□□□□ -0.29
ACSM3-202ENST00000440284 ITSN1Q15811 1721 aa13.26□□□□□ -0.29
ACSM3-202ENST00000440284 CANXP27824 592 aaKnown RBP13.25□□□□□ -0.29
ACSM3-202ENST00000440284 AMOTL2Q9Y2J4 779 aa13.25□□□□□ -0.29
ACSM3-202ENST00000440284 AKAP12Q02952 1782 aa13.25□□□□□ -0.29
ACSM3-202ENST00000440284 C20orf194Q5TEA3 1177 aa13.24□□□□□ -0.29
ACSM3-202ENST00000440284 CDK12Q9NYV4 1490 aaPredicted RBP13.24□□□□□ -0.29
ACSM3-202ENST00000440284 BCAR3O75815 825 aa13.23□□□□□ -0.29
ACSM3-202ENST00000440284 CALD1Q05682 793 aaKnown RBP13.23□□□□□ -0.29
ACSM3-202ENST00000440284 NME9Q86XW9 330 aa13.23□□□□□ -0.29
ACSM3-202ENST00000440284 SLC26A8Q96RN1 970 aa13.23□□□□□ -0.29
ACSM3-202ENST00000440284 PRR36Q9H6K5 1346 aa13.23□□□□□ -0.29
ACSM3-202ENST00000440284 PTPRUQ92729 1446 aa13.23□□□□□ -0.29
ACSM3-202ENST00000440284 RARSP54136 660 aaKnown RBP13.23□□□□□ -0.29
ACSM3-202ENST00000440284 RIPK4P57078 832 aa13.23□□□□□ -0.29
ACSM3-202ENST00000440284 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.22□□□□□ -0.29
ACSM3-202ENST00000440284 TTC21BQ7Z4L5 1316 aa13.22□□□□□ -0.29
ACSM3-202ENST00000440284 ACEP12821 1306 aa13.21□□□□□ -0.29
ACSM3-202ENST00000440284 TTC21AQ8NDW8 1320 aa13.21□□□□□ -0.29
ACSM3-202ENST00000440284 PPM1GO15355 546 aaPredicted RBP13.21□□□□□ -0.29
ACSM3-202ENST00000440284 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
ACSM3-202ENST00000440284 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.3
ACSM3-202ENST00000440284 KDM2BQ8NHM5 1336 aa13.2□□□□□ -0.3
ACSM3-202ENST00000440284 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
ACSM3-202ENST00000440284 IL13P35225 146 aa13.2□□□□□ -0.3
ACSM3-202ENST00000440284 LMOD3Q0VAK6 560 aa13.2□□□□□ -0.3
ACSM3-202ENST00000440284 TRIM35Q9UPQ4 493 aa13.2□□□□□ -0.3
ACSM3-202ENST00000440284 MAP2P11137 1827 aaKnown RBP13.2□□□□□ -0.3
ACSM3-202ENST00000440284 MYT1Q01538 1121 aa13.19□□□□□ -0.3
ACSM3-202ENST00000440284 NFE2L2Q16236 605 aa13.19□□□□□ -0.3
ACSM3-202ENST00000440284 CEP170BQ9Y4F5 1589 aaPredicted RBP13.19□□□□□ -0.3
ACSM3-202ENST00000440284 USP6P35125 1406 aa13.19□□□□□ -0.3
ACSM3-202ENST00000440284 ANKARQ7Z5J8 1434 aa13.19□□□□□ -0.3
ACSM3-202ENST00000440284 PRKAR2BP31323 418 aa13.18□□□□□ -0.3
ACSM3-202ENST00000440284 ANKLE2Q86XL3 938 aa13.18□□□□□ -0.3
ACSM3-202ENST00000440284 ZNF428Q96B54 188 aa13.18□□□□□ -0.3
ACSM3-202ENST00000440284 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
ACSM3-202ENST00000440284 NCKAP5LQ9HCH0 1330 aa13.18□□□□□ -0.3
ACSM3-202ENST00000440284 ZKSCAN2Q63HK3 967 aa13.17□□□□□ -0.3
ACSM3-202ENST00000440284 FRAT1Q92837 279 aaPredicted RBP13.17□□□□□ -0.3
ACSM3-202ENST00000440284 NRKQ7Z2Y5 1582 aa13.16□□□□□ -0.3
ACSM3-202ENST00000440284 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
ACSM3-202ENST00000440284 LRRC7Q96NW7 1537 aa13.16□□□□□ -0.3
ACSM3-202ENST00000440284 PMFBP1Q8TBY8 1022 aa13.16□□□□□ -0.3
ACSM3-202ENST00000440284 CLUAP1Q96AJ1 413 aa13.16□□□□□ -0.3
ACSM3-202ENST00000440284 ZRANB1Q9UGI0 708 aa13.16□□□□□ -0.3
ACSM3-202ENST00000440284 OVOS2A0A0J9YW53 1432 aa13.16□□□□□ -0.3
ACSM3-202ENST00000440284 OVOS2Q6IE36 1432 aa13.16□□□□□ -0.3
ACSM3-202ENST00000440284 USP31Q70CQ4 1352 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms