RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 BRWD3Q6RI45 1802 aa19.87■□□□□ 0.77
PRAME-209ENST00000439106 PAK3O75914 559 aaPredicted RBP19.86■□□□□ 0.77
PRAME-209ENST00000439106 CABP2Q9NPB3 220 aa19.86■□□□□ 0.77
PRAME-209ENST00000439106 SRPK2P78362 688 aaKnown RBP19.85■□□□□ 0.77
PRAME-209ENST00000439106 TONSLQ96HA7 1378 aa19.84■□□□□ 0.77
PRAME-209ENST00000439106 COL14A1Q05707 1796 aaKnown RBP19.84■□□□□ 0.77
PRAME-209ENST00000439106 PPIP5K1Q6PFW1 1433 aa19.84■□□□□ 0.77
PRAME-209ENST00000439106 ACEP12821 1306 aa19.83■□□□□ 0.77
PRAME-209ENST00000439106 POLR3AO14802 1390 aaPredicted RBP19.83■□□□□ 0.76
PRAME-209ENST00000439106 AKAP12Q02952 1782 aa19.82■□□□□ 0.76
PRAME-209ENST00000439106 RALGAPBQ86X10 1494 aa19.81■□□□□ 0.76
PRAME-209ENST00000439106 NUTM2GQ5VZR2 741 aa19.81■□□□□ 0.76
PRAME-209ENST00000439106 UPF1Q92900 1129 aaKnown RBP eCLIP19.81■□□□□ 0.76
PRAME-209ENST00000439106 CCDC61Q9Y6R9 512 aa19.81■□□□□ 0.76
PRAME-209ENST00000439106 UNC5CLQ8IV45 518 aa19.8■□□□□ 0.76
PRAME-209ENST00000439106 NRKQ7Z2Y5 1582 aa19.78■□□□□ 0.76
PRAME-209ENST00000439106 PLEKHG3A1L390 1219 aa19.78■□□□□ 0.76
PRAME-209ENST00000439106 FAM83GA6ND36 823 aa19.78■□□□□ 0.76
PRAME-209ENST00000439106 GJD4Q96KN9 370 aaPredicted RBP19.78■□□□□ 0.76
PRAME-209ENST00000439106 PIK3C2AO00443 1686 aa19.75■□□□□ 0.75
PRAME-209ENST00000439106 CARD11Q9BXL7 1154 aa19.75■□□□□ 0.75
PRAME-209ENST00000439106 EP400Q96L91 3159 aa19.75■□□□□ 0.75
PRAME-209ENST00000439106 EVC2Q86UK5 1308 aa19.75■□□□□ 0.75
PRAME-209ENST00000439106 CABP1Q9NZU7 370 aa19.74■□□□□ 0.75
PRAME-209ENST00000439106 BTG4Q9NY30 223 aa19.73■□□□□ 0.75
PRAME-209ENST00000439106 CCDC9Q9Y3X0 531 aaKnown RBP19.73■□□□□ 0.75
PRAME-209ENST00000439106 MON2Q7Z3U7 1717 aa19.73■□□□□ 0.75
PRAME-209ENST00000439106 KIAA0232Q92628 1395 aa19.72■□□□□ 0.75
PRAME-209ENST00000439106 USP6P35125 1406 aa19.72■□□□□ 0.75
PRAME-209ENST00000439106 ZC3H6P61129 1189 aaKnown RBP19.71■□□□□ 0.75
PRAME-209ENST00000439106 CHRNA2Q15822 529 aa19.71■□□□□ 0.75
PRAME-209ENST00000439106 VPS72Q15906 364 aa19.71■□□□□ 0.75
PRAME-209ENST00000439106 ABTB2Q8N961 1025 aa19.71■□□□□ 0.75
PRAME-209ENST00000439106 ATAD2Q6PL18 1390 aa19.7■□□□□ 0.74
PRAME-209ENST00000439106 PRDM11Q9NQV5 511 aa19.7■□□□□ 0.74
PRAME-209ENST00000439106 LMO7Q8WWI1 1683 aa19.69■□□□□ 0.74
PRAME-209ENST00000439106 RGPD5Q99666 1765 aa19.68■□□□□ 0.74
PRAME-209ENST00000439106 PCGF6Q9BYE7 350 aa19.67■□□□□ 0.74
PRAME-209ENST00000439106 USP19O94966 1318 aa19.67■□□□□ 0.74
PRAME-209ENST00000439106 SBNO2Q9Y2G9 1366 aa19.67■□□□□ 0.74
PRAME-209ENST00000439106 SSH2Q76I76 1423 aa19.66■□□□□ 0.74
PRAME-209ENST00000439106 SEPT12Q8IYM1 358 aa19.65■□□□□ 0.74
PRAME-209ENST00000439106 SLIT3O75094 1523 aa19.65■□□□□ 0.74
PRAME-209ENST00000439106 THSD7AQ9UPZ6 1657 aa19.65■□□□□ 0.74
PRAME-209ENST00000439106 CAMTA1Q9Y6Y1 1673 aa19.65■□□□□ 0.74
PRAME-209ENST00000439106 A0A0G2JS52 829 aa19.64■□□□□ 0.73
PRAME-209ENST00000439106 MYT1Q01538 1121 aa19.64■□□□□ 0.73
PRAME-209ENST00000439106 FAM98CQ17RN3 349 aaKnown RBP19.63■□□□□ 0.73
PRAME-209ENST00000439106 STRN4Q9NRL3 753 aa19.63■□□□□ 0.73
PRAME-209ENST00000439106 COL18A1P39060 1754 aa19.62■□□□□ 0.73
PRAME-209ENST00000439106 CD163L1Q9NR16 1453 aa19.62■□□□□ 0.73
PRAME-209ENST00000439106 CPSF1Q10570 1443 aaKnown RBP19.62■□□□□ 0.73
PRAME-209ENST00000439106 NLRP13Q86W25 1043 aa19.62■□□□□ 0.73
PRAME-209ENST00000439106 BRD4O60885 1362 aaPredicted RBP19.61■□□□□ 0.73
PRAME-209ENST00000439106 SPATA31A5Q5VU36 1347 aa19.61■□□□□ 0.73
PRAME-209ENST00000439106 SPATA31A7Q8IWB4 1347 aa19.61■□□□□ 0.73
PRAME-209ENST00000439106 ZBTB7CA1YPR0 619 aa19.61■□□□□ 0.73
PRAME-209ENST00000439106 NLRP6P59044 892 aa19.61■□□□□ 0.73
PRAME-209ENST00000439106 KTN1Q86UP2 1357 aaKnown RBP19.6■□□□□ 0.73
PRAME-209ENST00000439106 TTC21BQ7Z4L5 1316 aa19.6■□□□□ 0.73
PRAME-209ENST00000439106 GCP02774 474 aa19.6■□□□□ 0.73
PRAME-209ENST00000439106 ST20-MTHFSA0A0A6YYL1 179 aa19.59■□□□□ 0.73
PRAME-209ENST00000439106 ONECUT3O60422 494 aaPredicted RBP19.59■□□□□ 0.73
PRAME-209ENST00000439106 LTN1O94822 1766 aa19.59■□□□□ 0.73
PRAME-209ENST00000439106 USP54Q70EL1 1684 aa19.59■□□□□ 0.73
PRAME-209ENST00000439106 CPDO75976 1380 aa19.58■□□□□ 0.73
PRAME-209ENST00000439106 WNK3Q9BYP7 1800 aa19.58■□□□□ 0.73
PRAME-209ENST00000439106 TMC1Q8TDI8 760 aa19.58■□□□□ 0.72
PRAME-209ENST00000439106 SOX12O15370 315 aa19.57■□□□□ 0.72
PRAME-209ENST00000439106 TESK2Q96S53 571 aa19.57■□□□□ 0.72
PRAME-209ENST00000439106 USP35Q9P2H5 1018 aa19.57■□□□□ 0.72
PRAME-209ENST00000439106 SPATA31A1Q5TZJ5 1347 aa19.56■□□□□ 0.72
PRAME-209ENST00000439106 COL5A2P05997 1499 aaPredicted RBP19.56■□□□□ 0.72
PRAME-209ENST00000439106 KRT27Q7Z3Y8 459 aa19.56■□□□□ 0.72
PRAME-209ENST00000439106 FAM182BQ5T319 152 aa19.55■□□□□ 0.72
PRAME-209ENST00000439106 LARP1Q6PKG0 1096 aaKnown RBP19.55■□□□□ 0.72
PRAME-209ENST00000439106 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.55■□□□□ 0.72
PRAME-209ENST00000439106 ZNF692Q9BU19 519 aaPredicted RBP19.55■□□□□ 0.72
PRAME-209ENST00000439106 SLC12A5Q9H2X9 1139 aa19.55■□□□□ 0.72
PRAME-209ENST00000439106 ZRANB1Q9UGI0 708 aa19.55■□□□□ 0.72
PRAME-209ENST00000439106 NFAT5O94916 1531 aa19.55■□□□□ 0.72
PRAME-209ENST00000439106 USP47Q96K76 1375 aa19.55■□□□□ 0.72
PRAME-209ENST00000439106 RGPD1P0DJD0 1748 aa19.54■□□□□ 0.72
PRAME-209ENST00000439106 A0A1W2PP64 1363 aa19.54■□□□□ 0.72
PRAME-209ENST00000439106 TTC21AQ8NDW8 1320 aa19.53■□□□□ 0.72
PRAME-209ENST00000439106 EVA1CP58658 441 aa19.53■□□□□ 0.72
PRAME-209ENST00000439106 TNS1Q9HBL0 1735 aaKnown RBP19.53■□□□□ 0.72
PRAME-209ENST00000439106 BLMP54132 1417 aaPredicted RBP19.52■□□□□ 0.72
PRAME-209ENST00000439106 PARP4Q9UKK3 1724 aaKnown RBP19.52■□□□□ 0.72
PRAME-209ENST00000439106 NME9Q86XW9 330 aa19.51■□□□□ 0.71
PRAME-209ENST00000439106 MYOM1P52179 1685 aa19.51■□□□□ 0.71
PRAME-209ENST00000439106 AATKQ6ZMQ8 1374 aa19.49■□□□□ 0.71
PRAME-209ENST00000439106 HDGFL2Q7Z4V5 671 aaPredicted RBP19.49■□□□□ 0.71
PRAME-209ENST00000439106 DEFB132Q7Z7B7 95 aa19.49■□□□□ 0.71
PRAME-209ENST00000439106 LRRC37A3O60309 1634 aa19.49■□□□□ 0.71
PRAME-209ENST00000439106 CLSPNQ9HAW4 1339 aa19.49■□□□□ 0.71
PRAME-209ENST00000439106 AXIN2Q9Y2T1 843 aa19.48■□□□□ 0.71
PRAME-209ENST00000439106 EDC4Q6P2E9 1401 aaKnown RBP19.48■□□□□ 0.71
PRAME-209ENST00000439106 KIF20BQ96Q89 1820 aa19.47■□□□□ 0.71
PRAME-209ENST00000439106 CCDC125Q86Z20 511 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms