RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 ZBTB24O43167 697 aaPredicted RBP7.49□□□□□ -1.21
LSM1P1-201ENST00000438629 NBPF14Q5TI25 921 aa7.49□□□□□ -1.21
LSM1P1-201ENST00000438629 FNBP4Q8N3X1 1017 aaPredicted RBP7.49□□□□□ -1.21
LSM1P1-201ENST00000438629 EPS8L1Q8TE68 723 aa7.49□□□□□ -1.21
LSM1P1-201ENST00000438629 MAP10Q9P2G4 905 aa7.49□□□□□ -1.21
LSM1P1-201ENST00000438629 FCF1Q9Y324 198 aaKnown RBP7.49□□□□□ -1.21
LSM1P1-201ENST00000438629 ZNF592Q92610 1267 aa7.48□□□□□ -1.21
LSM1P1-201ENST00000438629 GPSM3Q9Y4H4 160 aa7.48□□□□□ -1.21
LSM1P1-201ENST00000438629 RNF223E7ERA6 249 aa7.47□□□□□ -1.21
LSM1P1-201ENST00000438629 PPP1R18Q6NYC8 613 aa7.47□□□□□ -1.21
LSM1P1-201ENST00000438629 PDXDC2PQ6P474 469 aa7.47□□□□□ -1.21
LSM1P1-201ENST00000438629 UNC93B1Q9H1C4 597 aa7.47□□□□□ -1.21
LSM1P1-201ENST00000438629 PTK2Q05397 1052 aa7.46□□□□□ -1.22
LSM1P1-201ENST00000438629 SOX11P35716 441 aa7.45□□□□□ -1.22
LSM1P1-201ENST00000438629 RPIAP49247 311 aa7.45□□□□□ -1.22
LSM1P1-201ENST00000438629 MCCD1P59942 119 aaPredicted RBP7.45□□□□□ -1.22
LSM1P1-201ENST00000438629 PTCRAQ6ISU1 281 aaPredicted RBP7.45□□□□□ -1.22
LSM1P1-201ENST00000438629 PLA2G2EQ9NZK7 142 aa7.45□□□□□ -1.22
LSM1P1-201ENST00000438629 ZBBXA8MT70 800 aa7.44□□□□□ -1.22
LSM1P1-201ENST00000438629 SUPT5HO00267 1087 aaKnown RBP7.44□□□□□ -1.22
LSM1P1-201ENST00000438629 PPEF1O14829 653 aaPredicted RBP7.44□□□□□ -1.22
LSM1P1-201ENST00000438629 CD2BP2O95400 341 aaKnown RBP7.44□□□□□ -1.22
LSM1P1-201ENST00000438629 EIF4G2P78344 907 aaKnown RBP eCLIP7.44□□□□□ -1.22
LSM1P1-201ENST00000438629 NR1H3Q13133 447 aa7.44□□□□□ -1.22
LSM1P1-201ENST00000438629 IRF5Q13568 498 aa7.44□□□□□ -1.22
LSM1P1-201ENST00000438629 ZNF777Q9ULD5 760 aaPredicted RBP7.43□□□□□ -1.22
LSM1P1-201ENST00000438629 GPR37L1O60883 481 aa7.42□□□□□ -1.22
LSM1P1-201ENST00000438629 BPHLQ86WA6 291 aaPredicted RBP7.42□□□□□ -1.22
LSM1P1-201ENST00000438629 BAP1Q92560 729 aa7.42□□□□□ -1.22
LSM1P1-201ENST00000438629 WNT7BP56706 349 aa7.41□□□□□ -1.22
LSM1P1-201ENST00000438629 ZBTB33Q86T24 672 aa7.41□□□□□ -1.22
LSM1P1-201ENST00000438629 ZNF511Q8NB15 262 aa7.41□□□□□ -1.22
LSM1P1-201ENST00000438629 ARHGAP9Q9BRR9 750 aa7.41□□□□□ -1.22
LSM1P1-201ENST00000438629 VAC14Q08AM6 782 aa7.4□□□□□ -1.22
LSM1P1-201ENST00000438629 SEMA3FQ13275 785 aa7.4□□□□□ -1.22
LSM1P1-201ENST00000438629 AGERQ15109 404 aa7.4□□□□□ -1.22
LSM1P1-201ENST00000438629 CALR3Q96L12 384 aaKnown RBP7.4□□□□□ -1.22
LSM1P1-201ENST00000438629 A0A0G2JS52 829 aa7.39□□□□□ -1.23
LSM1P1-201ENST00000438629 FBXO45P0C2W1 286 aa7.39□□□□□ -1.23
LSM1P1-201ENST00000438629 TRIM32Q13049 653 aa7.39□□□□□ -1.23
LSM1P1-201ENST00000438629 SH3BP5LQ7L8J4 393 aa7.39□□□□□ -1.23
LSM1P1-201ENST00000438629 SERPINA10Q9UK55 444 aa7.39□□□□□ -1.23
LSM1P1-201ENST00000438629 SLC19A1P41440 591 aa7.38□□□□□ -1.23
LSM1P1-201ENST00000438629 HDGFL1Q5TGJ6 251 aa7.38□□□□□ -1.23
LSM1P1-201ENST00000438629 CCDC97Q96F63 343 aaPredicted RBP7.38□□□□□ -1.23
LSM1P1-201ENST00000438629 PLSCR2Q9NRY7 297 aa7.38□□□□□ -1.23
LSM1P1-201ENST00000438629 ARID3CA6NKF2 412 aa7.37□□□□□ -1.23
LSM1P1-201ENST00000438629 VARSP26640 1264 aaKnown RBP7.37□□□□□ -1.23
LSM1P1-201ENST00000438629 SH3BP2P78314 561 aa7.37□□□□□ -1.23
LSM1P1-201ENST00000438629 LINC01559Q495D7 138 aa7.37□□□□□ -1.23
LSM1P1-201ENST00000438629 PLA2G2CQ5R387 149 aa7.37□□□□□ -1.23
LSM1P1-201ENST00000438629 SH3RF1Q7Z6J0 888 aa7.37□□□□□ -1.23
LSM1P1-201ENST00000438629 GLMNQ92990 594 aa7.37□□□□□ -1.23
LSM1P1-201ENST00000438629 ALG2Q9H553 416 aa7.37□□□□□ -1.23
LSM1P1-201ENST00000438629 CDV3Q9UKY7 258 aaKnown RBP7.37□□□□□ -1.23
LSM1P1-201ENST00000438629 POM121CA8CG34 1229 aa7.36□□□□□ -1.23
LSM1P1-201ENST00000438629 DZIP3Q86Y13 1208 aaKnown RBP7.36□□□□□ -1.23
LSM1P1-201ENST00000438629 ADAM32Q8TC27 787 aa7.36□□□□□ -1.23
LSM1P1-201ENST00000438629 V9GY48 417 aaPredicted RBP7.36□□□□□ -1.23
LSM1P1-201ENST00000438629 MAGEB6P1A0A0J9YX57 407 aa7.35□□□□□ -1.23
LSM1P1-201ENST00000438629 LIAT1Q6ZQX7 453 aa7.35□□□□□ -1.23
LSM1P1-201ENST00000438629 CCDC125Q86Z20 511 aa7.35□□□□□ -1.23
LSM1P1-201ENST00000438629 FAM174AQ8TBP5 190 aa7.35□□□□□ -1.23
LSM1P1-201ENST00000438629 FOXJ1Q92949 421 aa7.35□□□□□ -1.23
LSM1P1-201ENST00000438629 PCDHB9Q9Y5E1 797 aa7.35□□□□□ -1.23
LSM1P1-201ENST00000438629 CARD14Q9BXL6 1004 aa7.34□□□□□ -1.23
LSM1P1-201ENST00000438629 RC3H1Q5TC82 1133 aaKnown RBP7.33□□□□□ -1.24
LSM1P1-201ENST00000438629 SPRYD7Q5W111 196 aa7.33□□□□□ -1.24
LSM1P1-201ENST00000438629 TRMT44Q8IYL2 757 aaKnown RBP7.33□□□□□ -1.24
LSM1P1-201ENST00000438629 EHBP1Q8NDI1 1231 aa7.33□□□□□ -1.24
LSM1P1-201ENST00000438629 TRIM52Q96A61 297 aa7.33□□□□□ -1.24
LSM1P1-201ENST00000438629 SLC10A4Q96EP9 437 aa7.33□□□□□ -1.24
LSM1P1-201ENST00000438629 OCSTAMPQ9BR26 566 aa7.33□□□□□ -1.24
LSM1P1-201ENST00000438629 C1QTNF2Q9BXJ5 285 aa7.33□□□□□ -1.24
LSM1P1-201ENST00000438629 RGS20O76081 388 aa7.32□□□□□ -1.24
LSM1P1-201ENST00000438629 SKOR1P84550 965 aa7.32□□□□□ -1.24
LSM1P1-201ENST00000438629 ERFEQ4G0M1 354 aa7.32□□□□□ -1.24
LSM1P1-201ENST00000438629 RNF20Q5VTR2 975 aa7.32□□□□□ -1.24
LSM1P1-201ENST00000438629 ZNF598Q86UK7 904 aaKnown RBP7.32□□□□□ -1.24
LSM1P1-201ENST00000438629 MPNDQ8N594 471 aa7.32□□□□□ -1.24
LSM1P1-201ENST00000438629 C1orf115Q9H7X2 142 aa7.32□□□□□ -1.24
LSM1P1-201ENST00000438629 CEP126Q9P2H0 1117 aa7.32□□□□□ -1.24
LSM1P1-201ENST00000438629 WNT7AO00755 349 aa7.31□□□□□ -1.24
LSM1P1-201ENST00000438629 NBPF20Q3BBV1 942 aa7.31□□□□□ -1.24
LSM1P1-201ENST00000438629 SLFNL1Q499Z3 407 aa7.31□□□□□ -1.24
LSM1P1-201ENST00000438629 CCDC82Q8N4S0 544 aa7.31□□□□□ -1.24
LSM1P1-201ENST00000438629 NFATC2IPQ8NCF5 419 aa7.31□□□□□ -1.24
LSM1P1-201ENST00000438629 PRKD2Q9BZL6 878 aa7.31□□□□□ -1.24
LSM1P1-201ENST00000438629 C4orf48Q5BLP8 95 aa7.3□□□□□ -1.24
LSM1P1-201ENST00000438629 ADAMTS19Q8TE59 1207 aa7.3□□□□□ -1.24
LSM1P1-201ENST00000438629 LZTS3O60299 673 aaPredicted RBP7.29□□□□□ -1.24
LSM1P1-201ENST00000438629 ZNF697Q5TEC3 545 aa7.29□□□□□ -1.24
LSM1P1-201ENST00000438629 SEPT12Q8IYM1 358 aa7.29□□□□□ -1.24
LSM1P1-201ENST00000438629 EMID1Q96A84 441 aaPredicted RBP7.29□□□□□ -1.24
LSM1P1-201ENST00000438629 MAP4K5Q9Y4K4 846 aa7.29□□□□□ -1.24
LSM1P1-201ENST00000438629 VASH1Q7L8A9 365 aaPredicted RBP7.28□□□□□ -1.24
LSM1P1-201ENST00000438629 CDK15Q96Q40 435 aa7.28□□□□□ -1.24
LSM1P1-201ENST00000438629 ARID3AQ99856 593 aa7.28□□□□□ -1.24
LSM1P1-201ENST00000438629 PPP1R12CQ9BZL4 782 aa7.28□□□□□ -1.24
LSM1P1-201ENST00000438629 MAP7D1Q3KQU3 841 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms