RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 VPS37CA5D8V6 355 aaPredicted RBP19.09■□□□□ 0.65
PTPN13-204ENST00000436978 CT47B1P0C2W7 299 aaPredicted RBP19.09■□□□□ 0.65
PTPN13-204ENST00000436978 SETQ01105 290 aaPredicted RBP19.09■□□□□ 0.65
PTPN13-204ENST00000436978 SPG7Q9UQ90 795 aa19.09■□□□□ 0.65
PTPN13-204ENST00000436978 EPS15P42566 896 aa19.09■□□□□ 0.65
PTPN13-204ENST00000436978 TNNT3P45378 269 aaPredicted RBP19.09■□□□□ 0.65
PTPN13-204ENST00000436978 CDK19Q9BWU1 502 aa19.09■□□□□ 0.65
PTPN13-204ENST00000436978 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
PTPN13-204ENST00000436978 KIAA0586Q9BVV6 1533 aa19.09■□□□□ 0.65
PTPN13-204ENST00000436978 GSE1Q14687 1217 aa19.09■□□□□ 0.65
PTPN13-204ENST00000436978 CCAR2Q8N163 923 aaKnown RBP19.09■□□□□ 0.65
PTPN13-204ENST00000436978 C22orf23Q9BZE7 217 aa19.08■□□□□ 0.65
PTPN13-204ENST00000436978 OLFM4Q6UX06 510 aa19.08■□□□□ 0.65
PTPN13-204ENST00000436978 ATAD2Q6PL18 1390 aa19.08■□□□□ 0.65
PTPN13-204ENST00000436978 MAGI1Q96QZ7 1491 aaPredicted RBP19.08■□□□□ 0.64
PTPN13-204ENST00000436978 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.08■□□□□ 0.64
PTPN13-204ENST00000436978 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
PTPN13-204ENST00000436978 LNPKQ9C0E8 428 aa19.08■□□□□ 0.64
PTPN13-204ENST00000436978 CAMSAP2Q08AD1 1489 aa19.07■□□□□ 0.64
PTPN13-204ENST00000436978 FSD1Q9BTV5 496 aa19.07■□□□□ 0.64
PTPN13-204ENST00000436978 ABCA10Q8WWZ4 1543 aa19.07■□□□□ 0.64
PTPN13-204ENST00000436978 GNAI2P04899 355 aa19.07■□□□□ 0.64
PTPN13-204ENST00000436978 KLHL34Q8N239 644 aa19.07■□□□□ 0.64
PTPN13-204ENST00000436978 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
PTPN13-204ENST00000436978 FYB1O15117 783 aa19.06■□□□□ 0.64
PTPN13-204ENST00000436978 MCM2P49736 904 aa19.06■□□□□ 0.64
PTPN13-204ENST00000436978 CCT4P50991 539 aaKnown RBP19.06■□□□□ 0.64
PTPN13-204ENST00000436978 CDK13Q14004 1512 aaKnown RBP19.06■□□□□ 0.64
PTPN13-204ENST00000436978 AMER1Q5JTC6 1135 aaPredicted RBP19.06■□□□□ 0.64
PTPN13-204ENST00000436978 PPP2R1AP30153 589 aa19.06■□□□□ 0.64
PTPN13-204ENST00000436978 ANKLE2Q86XL3 938 aa19.06■□□□□ 0.64
PTPN13-204ENST00000436978 CFAP70Q5T0N1 1121 aa19.05■□□□□ 0.64
PTPN13-204ENST00000436978 LETM1O95202 739 aaPredicted RBP19.05■□□□□ 0.64
PTPN13-204ENST00000436978 CNKSR2Q8WXI2 1034 aa19.05■□□□□ 0.64
PTPN13-204ENST00000436978 ARID3AQ99856 593 aa19.05■□□□□ 0.64
PTPN13-204ENST00000436978 PRKAR2BP31323 418 aa19.05■□□□□ 0.64
PTPN13-204ENST00000436978 CABP4P57796 275 aa19.05■□□□□ 0.64
PTPN13-204ENST00000436978 TTC39AQ5SRH9 613 aa19.04■□□□□ 0.64
PTPN13-204ENST00000436978 GCC1Q96CN9 775 aa19.04■□□□□ 0.64
PTPN13-204ENST00000436978 CCDC158Q5M9N0 1113 aa19.04■□□□□ 0.64
PTPN13-204ENST00000436978 PANK1Q8TE04 598 aa19.04■□□□□ 0.64
PTPN13-204ENST00000436978 SF3B2Q13435 895 aaKnown RBP19.04■□□□□ 0.64
PTPN13-204ENST00000436978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.03■□□□□ 0.64
PTPN13-204ENST00000436978 PDCP20941 246 aa19.03■□□□□ 0.64
PTPN13-204ENST00000436978 ADAMTS8Q9UP79 889 aa19.03■□□□□ 0.64
PTPN13-204ENST00000436978 R3HCC1Q9Y3T6 440 aaKnown RBP19.03■□□□□ 0.64
PTPN13-204ENST00000436978 TCP11L2Q8N4U5 519 aa19.03■□□□□ 0.64
PTPN13-204ENST00000436978 STRN4Q9NRL3 753 aa19.03■□□□□ 0.64
PTPN13-204ENST00000436978 FANCIQ9NVI1 1328 aa19.03■□□□□ 0.64
PTPN13-204ENST00000436978 TWISTNBQ3B726 338 aaPredicted RBP19.02■□□□□ 0.64
PTPN13-204ENST00000436978 CNNM1Q9NRU3 951 aa19.02■□□□□ 0.64
PTPN13-204ENST00000436978 IKQ13123 557 aaPredicted RBP19.02■□□□□ 0.64
PTPN13-204ENST00000436978 HOMER1Q86YM7 354 aa19.02■□□□□ 0.63
PTPN13-204ENST00000436978 RBM42Q9BTD8 480 aaKnown RBP19.01■□□□□ 0.63
PTPN13-204ENST00000436978 TXLNAP40222 546 aa19.01■□□□□ 0.63
PTPN13-204ENST00000436978 ODF2Q5BJF6 829 aa19.01■□□□□ 0.63
PTPN13-204ENST00000436978 CT47A1Q5JQC4 288 aaPredicted RBP19.01■□□□□ 0.63
PTPN13-204ENST00000436978 TOM1L2Q6ZVM7 507 aa19■□□□□ 0.63
PTPN13-204ENST00000436978 SURF6O75683 361 aaKnown RBP19■□□□□ 0.63
PTPN13-204ENST00000436978 ARHGEF11O15085 1522 aa19■□□□□ 0.63
PTPN13-204ENST00000436978 WDR63Q8IWG1 891 aa18.99■□□□□ 0.63
PTPN13-204ENST00000436978 RSPH6AQ9H0K4 717 aa18.99■□□□□ 0.63
PTPN13-204ENST00000436978 ZSCAN25Q6NSZ9 544 aa18.99■□□□□ 0.63
PTPN13-204ENST00000436978 WWC2Q6AWC2 1192 aa18.99■□□□□ 0.63
PTPN13-204ENST00000436978 ZNF592Q92610 1267 aa18.99■□□□□ 0.63
PTPN13-204ENST00000436978 KRI1Q8N9T8 703 aaKnown RBP18.99■□□□□ 0.63
PTPN13-204ENST00000436978 PDE3AQ14432 1141 aa18.98■□□□□ 0.63
PTPN13-204ENST00000436978 ANKRD1Q15327 319 aa18.98■□□□□ 0.63
PTPN13-204ENST00000436978 RDXP35241 583 aaKnown RBP18.98■□□□□ 0.63
PTPN13-204ENST00000436978 DNAJC2Q99543 621 aaKnown RBP18.98■□□□□ 0.63
PTPN13-204ENST00000436978 HDGFL1Q5TGJ6 251 aa18.98■□□□□ 0.63
PTPN13-204ENST00000436978 ZNF396Q96N95 335 aaPredicted RBP18.98■□□□□ 0.63
PTPN13-204ENST00000436978 CDK5RAP3Q96JB5 506 aa18.97■□□□□ 0.63
PTPN13-204ENST00000436978 FOSBP53539 338 aa18.97■□□□□ 0.63
PTPN13-204ENST00000436978 SRCIN1Q9C0H9 1055 aa18.97■□□□□ 0.63
PTPN13-204ENST00000436978 SLC4A3P48751 1232 aa18.97■□□□□ 0.63
PTPN13-204ENST00000436978 NACAP1Q9BZK3 213 aa18.97■□□□□ 0.63
PTPN13-204ENST00000436978 CDR1P51861 262 aa18.96■□□□□ 0.63
PTPN13-204ENST00000436978 NAP1L1P55209 391 aaKnown RBP18.96■□□□□ 0.63
PTPN13-204ENST00000436978 TEX35Q5T0J7 233 aa18.96■□□□□ 0.63
PTPN13-204ENST00000436978 AK7Q96M32 723 aa18.96■□□□□ 0.63
PTPN13-204ENST00000436978 SAMD1Q6SPF0 538 aaPredicted RBP18.96■□□□□ 0.63
PTPN13-204ENST00000436978 NOB1Q9ULX3 412 aaKnown RBP18.96■□□□□ 0.63
PTPN13-204ENST00000436978 ADGRL1O94910 1474 aa18.95■□□□□ 0.62
PTPN13-204ENST00000436978 CABP1Q9NZU7 370 aa18.95■□□□□ 0.62
PTPN13-204ENST00000436978 RABEP1Q15276 862 aa18.95■□□□□ 0.62
PTPN13-204ENST00000436978 RUFY1Q96T51 708 aa18.95■□□□□ 0.62
PTPN13-204ENST00000436978 ACBD3Q9H3P7 528 aa18.95■□□□□ 0.62
PTPN13-204ENST00000436978 MYO6Q9UM54 1294 aa18.95■□□□□ 0.62
PTPN13-204ENST00000436978 MAP3K1Q13233 1512 aa18.95■□□□□ 0.62
PTPN13-204ENST00000436978 LRRCC1Q9C099 1032 aa18.95■□□□□ 0.62
PTPN13-204ENST00000436978 SULT6B1Q6IMI4 303 aa18.94■□□□□ 0.62
PTPN13-204ENST00000436978 CCAR1Q8IX12 1150 aaKnown RBP18.94■□□□□ 0.62
PTPN13-204ENST00000436978 ZNF530Q6P9A1 599 aaPredicted RBP18.94■□□□□ 0.62
PTPN13-204ENST00000436978 CCDC173Q0VFZ6 552 aa18.94■□□□□ 0.62
PTPN13-204ENST00000436978 KIF21AQ7Z4S6 1674 aa18.94■□□□□ 0.62
PTPN13-204ENST00000436978 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
PTPN13-204ENST00000436978 PIP4K2AP48426 406 aaPredicted RBP18.94■□□□□ 0.62
PTPN13-204ENST00000436978 KINO60870 393 aaKnown RBP18.93■□□□□ 0.62
PTPN13-204ENST00000436978 SLC4A2P04920 1241 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms