RNA–Protein interactions for RNA: ENST00000430149.2

CDKN1C-203, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-203ENST00000430149 SPATA31A3Q5VYP0 1347 aa27.72■■■□□ 2.03
CDKN1C-203ENST00000430149 LRRC59Q96AG4 307 aaKnown RBP27.72■■■□□ 2.03
CDKN1C-203ENST00000430149 LMOD2Q6P5Q4 547 aa27.71■■■□□ 2.03
CDKN1C-203ENST00000430149 PANK3Q9H999 370 aa27.71■■■□□ 2.03
CDKN1C-203ENST00000430149 SBNO1A3KN83 1393 aa27.71■■■□□ 2.03
CDKN1C-203ENST00000430149 MON2Q7Z3U7 1717 aa27.7■■■□□ 2.03
CDKN1C-203ENST00000430149 PLEKHG5O94827 1062 aa27.7■■■□□ 2.03
CDKN1C-203ENST00000430149 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.7■■■□□ 2.03
CDKN1C-203ENST00000430149 NUTM2GQ5VZR2 741 aa27.69■■■□□ 2.02
CDKN1C-203ENST00000430149 TTC21BQ7Z4L5 1316 aa27.69■■■□□ 2.02
CDKN1C-203ENST00000430149 TNS3Q68CZ2 1445 aa27.69■■■□□ 2.02
CDKN1C-203ENST00000430149 PNPLA6Q8IY17 1366 aa27.67■■■□□ 2.02
CDKN1C-203ENST00000430149 NRKQ7Z2Y5 1582 aa27.67■■■□□ 2.02
CDKN1C-203ENST00000430149 ZRANB1Q9UGI0 708 aa27.65■■■□□ 2.02
CDKN1C-203ENST00000430149 EDC4Q6P2E9 1401 aaKnown RBP27.65■■■□□ 2.02
CDKN1C-203ENST00000430149 NSD3Q9BZ95 1437 aa27.65■■■□□ 2.02
CDKN1C-203ENST00000430149 ALS2Q96Q42 1657 aa27.64■■■□□ 2.02
CDKN1C-203ENST00000430149 JCADQ9P266 1359 aa27.64■■■□□ 2.02
CDKN1C-203ENST00000430149 NME9Q86XW9 330 aa27.64■■■□□ 2.01
CDKN1C-203ENST00000430149 ABTB2Q8N961 1025 aa27.64■■■□□ 2.01
CDKN1C-203ENST00000430149 CABLES1Q8TDN4 633 aa27.63■■■□□ 2.01
CDKN1C-203ENST00000430149 BRD4O60885 1362 aaPredicted RBP27.61■■■□□ 2.01
CDKN1C-203ENST00000430149 PIK3C2AO00443 1686 aa27.6■■■□□ 2.01
CDKN1C-203ENST00000430149 ARHGEF10O15013 1369 aa27.59■■■□□ 2.01
CDKN1C-203ENST00000430149 TTC21AQ8NDW8 1320 aa27.59■■■□□ 2.01
CDKN1C-203ENST00000430149 DDX10Q13206 875 aaKnown RBP27.58■■■□□ 2.01
CDKN1C-203ENST00000430149 SHPRHQ149N8 1683 aa27.58■■■□□ 2
CDKN1C-203ENST00000430149 NLRP6P59044 892 aa27.57■■■□□ 2
CDKN1C-203ENST00000430149 NUTM2BA6NNL0 878 aaPredicted RBP27.56■■■□□ 2
CDKN1C-203ENST00000430149 NUTM2EB1AL46 878 aaPredicted RBP27.56■■■□□ 2
CDKN1C-203ENST00000430149 NUTM2AQ8IVF1 878 aaPredicted RBP27.56■■■□□ 2
CDKN1C-203ENST00000430149 FYB1O15117 783 aa27.56■■■□□ 2
CDKN1C-203ENST00000430149 PER1O15534 1290 aaPredicted RBP27.56■■■□□ 2
CDKN1C-203ENST00000430149 GGNBP2Q9H3C7 697 aa27.56■■■□□ 2
CDKN1C-203ENST00000430149 MED1Q15648 1581 aaPredicted RBP27.54■■■□□ 2
CDKN1C-203ENST00000430149 COL22A1Q8NFW1 1626 aaPredicted RBP27.54■■■□□ 2
CDKN1C-203ENST00000430149 NLRP13Q86W25 1043 aa27.52■■■□□ 2
CDKN1C-203ENST00000430149 MARF1Q9Y4F3 1742 aaKnown RBP27.51■■□□□ 1.99
CDKN1C-203ENST00000430149 LRP6O75581 1613 aa27.51■■□□□ 1.99
CDKN1C-203ENST00000430149 KNSTRNQ9Y448 316 aa27.51■■□□□ 1.99
CDKN1C-203ENST00000430149 USP19O94966 1318 aa27.51■■□□□ 1.99
CDKN1C-203ENST00000430149 USP31Q70CQ4 1352 aa27.5■■□□□ 1.99
CDKN1C-203ENST00000430149 SOX12O15370 315 aa27.5■■□□□ 1.99
CDKN1C-203ENST00000430149 CNGB1Q14028 1251 aaPredicted RBP27.49■■□□□ 1.99
CDKN1C-203ENST00000430149 CGNL1Q0VF96 1302 aa27.49■■□□□ 1.99
CDKN1C-203ENST00000430149 SPATA31A6Q5VVP1 1343 aa27.49■■□□□ 1.99
CDKN1C-203ENST00000430149 CRYBG1Q9Y4K1 1723 aa27.49■■□□□ 1.99
CDKN1C-203ENST00000430149 AMER1Q5JTC6 1135 aaPredicted RBP27.48■■□□□ 1.99
CDKN1C-203ENST00000430149 OVOS2A0A0J9YW53 1432 aa27.48■■□□□ 1.99
CDKN1C-203ENST00000430149 OVOS2Q6IE36 1432 aa27.48■■□□□ 1.99
CDKN1C-203ENST00000430149 ABCA3Q99758 1704 aa27.48■■□□□ 1.99
CDKN1C-203ENST00000430149 ADAMTS2O95450 1211 aa27.48■■□□□ 1.99
CDKN1C-203ENST00000430149 KIF20BQ96Q89 1820 aa27.47■■□□□ 1.99
CDKN1C-203ENST00000430149 FBLN1P23142 703 aa27.47■■□□□ 1.99
CDKN1C-203ENST00000430149 HAP1P54257 671 aaPredicted RBP27.47■■□□□ 1.99
CDKN1C-203ENST00000430149 GCP02774 474 aa27.46■■□□□ 1.99
CDKN1C-203ENST00000430149 PHRF1Q9P1Y6 1649 aaKnown RBP27.45■■□□□ 1.99
CDKN1C-203ENST00000430149 COG3Q96JB2 828 aa27.45■■□□□ 1.99
CDKN1C-203ENST00000430149 SLIT3O75094 1523 aa27.44■■□□□ 1.98
CDKN1C-203ENST00000430149 ZC3H6P61129 1189 aaKnown RBP27.43■■□□□ 1.98
CDKN1C-203ENST00000430149 DIEXFQ68CQ4 756 aaKnown RBP27.43■■□□□ 1.98
CDKN1C-203ENST00000430149 CC2D1BQ5T0F9 858 aaKnown RBP27.43■■□□□ 1.98
CDKN1C-203ENST00000430149 USP54Q70EL1 1684 aa27.42■■□□□ 1.98
CDKN1C-203ENST00000430149 TNNT2P45379 298 aaPredicted RBP27.39■■□□□ 1.97
CDKN1C-203ENST00000430149 NFAT5O94916 1531 aa27.38■■□□□ 1.97
CDKN1C-203ENST00000430149 KIAA0232Q92628 1395 aa27.38■■□□□ 1.97
CDKN1C-203ENST00000430149 ZBTB7CA1YPR0 619 aa27.38■■□□□ 1.97
CDKN1C-203ENST00000430149 CHRNA2Q15822 529 aa27.38■■□□□ 1.97
CDKN1C-203ENST00000430149 MEX3CQ5U5Q3 659 aaKnown RBP27.37■■□□□ 1.97
CDKN1C-203ENST00000430149 FAM83GA6ND36 823 aa27.36■■□□□ 1.97
CDKN1C-203ENST00000430149 KCNH5Q8NCM2 988 aa27.36■■□□□ 1.97
CDKN1C-203ENST00000430149 C8orf37Q96NL8 207 aa27.36■■□□□ 1.97
CDKN1C-203ENST00000430149 MORC1Q86VD1 984 aa27.35■■□□□ 1.97
CDKN1C-203ENST00000430149 NSD2O96028 1365 aa27.35■■□□□ 1.97
CDKN1C-203ENST00000430149 RRS1Q15050 365 aaKnown RBP27.34■■□□□ 1.97
CDKN1C-203ENST00000430149 PRDM11Q9NQV5 511 aa27.34■■□□□ 1.97
CDKN1C-203ENST00000430149 ANKRD26Q9UPS8 1709 aa27.33■■□□□ 1.97
CDKN1C-203ENST00000430149 NPC1L1Q9UHC9 1359 aa27.32■■□□□ 1.96
CDKN1C-203ENST00000430149 ARHGEF25Q86VW2 580 aa27.32■■□□□ 1.96
CDKN1C-203ENST00000430149 CPDO75976 1380 aa27.31■■□□□ 1.96
CDKN1C-203ENST00000430149 NGLY1Q96IV0 654 aa27.31■■□□□ 1.96
CDKN1C-203ENST00000430149 MAP3K19Q56UN5 1328 aa27.3■■□□□ 1.96
CDKN1C-203ENST00000430149 AXIN2Q9Y2T1 843 aa27.27■■□□□ 1.96
CDKN1C-203ENST00000430149 EMILIN1Q9Y6C2 1016 aa27.27■■□□□ 1.96
CDKN1C-203ENST00000430149 AFF2P51816 1311 aa27.26■■□□□ 1.95
CDKN1C-203ENST00000430149 LTN1O94822 1766 aa27.25■■□□□ 1.95
CDKN1C-203ENST00000430149 POLKQ9UBT6 870 aa27.25■■□□□ 1.95
CDKN1C-203ENST00000430149 BTG4Q9NY30 223 aa27.24■■□□□ 1.95
CDKN1C-203ENST00000430149 AATKQ6ZMQ8 1374 aa27.23■■□□□ 1.95
CDKN1C-203ENST00000430149 FNBP4Q8N3X1 1017 aaPredicted RBP27.23■■□□□ 1.95
CDKN1C-203ENST00000430149 COL18A1P39060 1754 aa27.23■■□□□ 1.95
CDKN1C-203ENST00000430149 COL14A1Q05707 1796 aaKnown RBP27.23■■□□□ 1.95
CDKN1C-203ENST00000430149 CAMTA1Q9Y6Y1 1673 aa27.23■■□□□ 1.95
CDKN1C-203ENST00000430149 SLIT2O94813 1529 aa27.23■■□□□ 1.95
CDKN1C-203ENST00000430149 PPM1GO15355 546 aaPredicted RBP27.22■■□□□ 1.95
CDKN1C-203ENST00000430149 PHF23Q9BUL5 403 aaPredicted RBP27.22■■□□□ 1.95
CDKN1C-203ENST00000430149 PLCH1Q4KWH8 1693 aa27.22■■□□□ 1.95
CDKN1C-203ENST00000430149 AMPHP49418 695 aa27.22■■□□□ 1.95
CDKN1C-203ENST00000430149 PEAK1Q9H792 1746 aa27.21■■□□□ 1.95
CDKN1C-203ENST00000430149 LMO7Q8WWI1 1683 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms