RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 UNC93B1Q9H1C4 597 aa6.64□□□□□ -1.35
HMGB1P9-201ENST00000429856 CLCN1P35523 988 aa6.63□□□□□ -1.35
HMGB1P9-201ENST00000429856 PTPRNQ16849 979 aa6.63□□□□□ -1.35
HMGB1P9-201ENST00000429856 MINK1Q8N4C8 1332 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P9-201ENST00000429856 ZC3H15Q8WU90 426 aaKnown RBP6.63□□□□□ -1.35
HMGB1P9-201ENST00000429856 KRTAP9-2Q9BYQ4 174 aa6.63□□□□□ -1.35
HMGB1P9-201ENST00000429856 KCNH2Q12809 1159 aa6.62□□□□□ -1.35
HMGB1P9-201ENST00000429856 LINC01559Q495D7 138 aa6.62□□□□□ -1.35
HMGB1P9-201ENST00000429856 ZNF511Q8NB15 262 aa6.62□□□□□ -1.35
HMGB1P9-201ENST00000429856 GPCPD1Q9NPB8 672 aa6.62□□□□□ -1.35
HMGB1P9-201ENST00000429856 TLL2Q9Y6L7 1015 aa6.62□□□□□ -1.35
HMGB1P9-201ENST00000429856 KRTAP9-6A0A140TA67 174 aa6.61□□□□□ -1.35
HMGB1P9-201ENST00000429856 SOBPA7XYQ1 873 aa6.61□□□□□ -1.35
HMGB1P9-201ENST00000429856 ZMYND10O75800 440 aa6.61□□□□□ -1.35
HMGB1P9-201ENST00000429856 GDF11O95390 407 aa6.61□□□□□ -1.35
HMGB1P9-201ENST00000429856 TIMP2P16035 220 aa6.61□□□□□ -1.35
HMGB1P9-201ENST00000429856 FAM174AQ8TBP5 190 aa6.61□□□□□ -1.35
HMGB1P9-201ENST00000429856 RNF225M0QZC1 329 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P9-201ENST00000429856 UPP2O95045 317 aa6.6□□□□□ -1.35
HMGB1P9-201ENST00000429856 RASSF7Q02833 373 aa6.6□□□□□ -1.35
HMGB1P9-201ENST00000429856 XP32Q5T750 250 aa6.6□□□□□ -1.35
HMGB1P9-201ENST00000429856 BARGINQ6ZT62 677 aa6.6□□□□□ -1.35
HMGB1P9-201ENST00000429856 FAM217BQ9NTX9 383 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P9-201ENST00000429856 PPFIA3O75145 1194 aa6.59□□□□□ -1.35
HMGB1P9-201ENST00000429856 KLF16Q9BXK1 252 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P9-201ENST00000429856 PCDHGC3Q9UN70 934 aa6.59□□□□□ -1.35
HMGB1P9-201ENST00000429856 SPDYE5A6NIY4 337 aa6.58□□□□□ -1.36
HMGB1P9-201ENST00000429856 ARID5BQ14865 1188 aa6.58□□□□□ -1.36
HMGB1P9-201ENST00000429856 C6orf118Q5T5N4 469 aa6.58□□□□□ -1.36
HMGB1P9-201ENST00000429856 SPTLC1O15269 473 aa6.57□□□□□ -1.36
HMGB1P9-201ENST00000429856 ZIC2O95409 532 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P9-201ENST00000429856 GSK3AP49840 483 aa6.57□□□□□ -1.36
HMGB1P9-201ENST00000429856 NR5A1Q13285 461 aa6.57□□□□□ -1.36
HMGB1P9-201ENST00000429856 DESI1Q6ICB0 168 aa6.57□□□□□ -1.36
HMGB1P9-201ENST00000429856 PRR7Q8TB68 274 aa6.57□□□□□ -1.36
HMGB1P9-201ENST00000429856 CDK15Q96Q40 435 aa6.57□□□□□ -1.36
HMGB1P9-201ENST00000429856 BMP2P12643 396 aa6.56□□□□□ -1.36
HMGB1P9-201ENST00000429856 PRKCSHP14314 528 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P9-201ENST00000429856 CTHP32929 405 aa6.56□□□□□ -1.36
HMGB1P9-201ENST00000429856 TPRNQ4KMQ1 711 aa6.56□□□□□ -1.36
HMGB1P9-201ENST00000429856 ADAMTS8Q9UP79 889 aa6.56□□□□□ -1.36
HMGB1P9-201ENST00000429856 MTMR2Q13614 643 aa6.54□□□□□ -1.36
HMGB1P9-201ENST00000429856 KRTAP1-3Q8IUG1 177 aa6.54□□□□□ -1.36
HMGB1P9-201ENST00000429856 SPIRE2Q8WWL2 714 aa6.54□□□□□ -1.36
HMGB1P9-201ENST00000429856 CCDC102AQ96A19 550 aa6.54□□□□□ -1.36
HMGB1P9-201ENST00000429856 ITPKCQ96DU7 683 aa6.54□□□□□ -1.36
HMGB1P9-201ENST00000429856 ZFAND3Q9H8U3 227 aa6.54□□□□□ -1.36
HMGB1P9-201ENST00000429856 SSTR3P32745 418 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P9-201ENST00000429856 AGERQ15109 404 aa6.53□□□□□ -1.36
HMGB1P9-201ENST00000429856 AK7Q96M32 723 aa6.53□□□□□ -1.36
HMGB1P9-201ENST00000429856 CNTNAP3BQ96NU0 1288 aa6.53□□□□□ -1.36
HMGB1P9-201ENST00000429856 CNTNAP3Q9BZ76 1288 aa6.53□□□□□ -1.36
HMGB1P9-201ENST00000429856 IGHA1P01876 353 aa6.52□□□□□ -1.37
HMGB1P9-201ENST00000429856 NDUFV2P19404 249 aa6.52□□□□□ -1.37
HMGB1P9-201ENST00000429856 LYPD8Q6UX82 237 aa6.52□□□□□ -1.37
HMGB1P9-201ENST00000429856 LINC00528Q8N1L1 170 aa6.52□□□□□ -1.37
HMGB1P9-201ENST00000429856 SOS2Q07890 1332 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P9-201ENST00000429856 MOXD2PA6NHM9 499 aa6.51□□□□□ -1.37
HMGB1P9-201ENST00000429856 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.51□□□□□ -1.37
HMGB1P9-201ENST00000429856 BPHLQ86WA6 291 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P9-201ENST00000429856 FOXJ1Q92949 421 aa6.51□□□□□ -1.37
HMGB1P9-201ENST00000429856 TSEN34Q9BSV6 310 aaKnown RBP6.51□□□□□ -1.37
HMGB1P9-201ENST00000429856 SLC24A3Q9HC58 644 aa6.51□□□□□ -1.37
HMGB1P9-201ENST00000429856 GRM5P41594 1212 aa6.5□□□□□ -1.37
HMGB1P9-201ENST00000429856 GPR161Q8N6U8 529 aaKnown RBP6.5□□□□□ -1.37
HMGB1P9-201ENST00000429856 NR3C2P08235 984 aa6.49□□□□□ -1.37
HMGB1P9-201ENST00000429856 MARSP56192 900 aaKnown RBP6.49□□□□□ -1.37
HMGB1P9-201ENST00000429856 GPAT2Q6NUI2 795 aa6.49□□□□□ -1.37
HMGB1P9-201ENST00000429856 MEIOBQ8N635 442 aa6.49□□□□□ -1.37
HMGB1P9-201ENST00000429856 COL25A1Q9BXS0 654 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P9-201ENST00000429856 DNMT3LQ9UJW3 386 aa6.49□□□□□ -1.37
HMGB1P9-201ENST00000429856 DNMT3AQ9Y6K1 912 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P9-201ENST00000429856 TTLL8A6PVC2 850 aa6.48□□□□□ -1.37
HMGB1P9-201ENST00000429856 TRIM66O15016 1216 aa6.48□□□□□ -1.37
HMGB1P9-201ENST00000429856 IRS1P35568 1242 aa6.48□□□□□ -1.37
HMGB1P9-201ENST00000429856 GJA5P36382 358 aa6.48□□□□□ -1.37
HMGB1P9-201ENST00000429856 FOXK2Q01167 660 aa6.48□□□□□ -1.37
HMGB1P9-201ENST00000429856 KRT76Q01546 638 aa6.48□□□□□ -1.37
HMGB1P9-201ENST00000429856 DIXDC1Q155Q3 683 aa6.48□□□□□ -1.37
HMGB1P9-201ENST00000429856 AMHR2Q16671 573 aa6.48□□□□□ -1.37
HMGB1P9-201ENST00000429856 SVOPQ8N4V2 548 aa6.48□□□□□ -1.37
HMGB1P9-201ENST00000429856 PTSQ03393 145 aa6.47□□□□□ -1.37
HMGB1P9-201ENST00000429856 KANK3Q6NY19 840 aa6.47□□□□□ -1.37
HMGB1P9-201ENST00000429856 NANOS1Q8WY41 292 aaKnown RBP6.47□□□□□ -1.37
HMGB1P9-201ENST00000429856 EMILIN1Q9Y6C2 1016 aa6.47□□□□□ -1.37
HMGB1P9-201ENST00000429856 ZNF385CQ66K41 422 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P9-201ENST00000429856 ARMC2Q8NEN0 867 aa6.46□□□□□ -1.38
HMGB1P9-201ENST00000429856 SCARF2Q96GP6 870 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P9-201ENST00000429856 FIGNL2A6NMB9 653 aa6.45□□□□□ -1.38
HMGB1P9-201ENST00000429856 TTLL12Q14166 644 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P9-201ENST00000429856 MAP10Q9P2G4 905 aa6.45□□□□□ -1.38
HMGB1P9-201ENST00000429856 PDE4DQ08499 809 aa6.44□□□□□ -1.38
HMGB1P9-201ENST00000429856 VASH1Q7L8A9 365 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P9-201ENST00000429856 CCDC155Q8N6L0 562 aa6.44□□□□□ -1.38
HMGB1P9-201ENST00000429856 ARHGEF15O94989 841 aa6.43□□□□□ -1.38
HMGB1P9-201ENST00000429856 F12P00748 615 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P9-201ENST00000429856 SLURP2P0DP57 97 aa6.43□□□□□ -1.38
HMGB1P9-201ENST00000429856 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
HMGB1P9-201ENST00000429856 SV2AQ7L0J3 742 aa6.43□□□□□ -1.38
HMGB1P9-201ENST00000429856 ZBTB3Q9H5J0 574 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 308.7 ms