RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 L3MBTL2Q969R5 705 aa17.29■□□□□ 0.36
TTC3-208ENST00000428693 PRDM11Q9NQV5 511 aa17.29■□□□□ 0.36
TTC3-208ENST00000428693 CENPJQ9HC77 1338 aaPredicted RBP17.28■□□□□ 0.36
TTC3-208ENST00000428693 KIAA1210Q9ULL0 1709 aa17.28■□□□□ 0.36
TTC3-208ENST00000428693 CCDC61Q9Y6R9 512 aa17.28■□□□□ 0.36
TTC3-208ENST00000428693 ATP7BP35670 1465 aa17.28■□□□□ 0.36
TTC3-208ENST00000428693 EP400Q96L91 3159 aa17.28■□□□□ 0.36
TTC3-208ENST00000428693 ACEP12821 1306 aa17.27■□□□□ 0.36
TTC3-208ENST00000428693 SF3B2Q13435 895 aaKnown RBP17.27■□□□□ 0.36
TTC3-208ENST00000428693 FAM98CQ17RN3 349 aaKnown RBP17.27■□□□□ 0.36
TTC3-208ENST00000428693 CABP2Q9NPB3 220 aa17.27■□□□□ 0.36
TTC3-208ENST00000428693 NWD2Q9ULI1 1742 aa17.27■□□□□ 0.35
TTC3-208ENST00000428693 ALS2Q96Q42 1657 aa17.26■□□□□ 0.35
TTC3-208ENST00000428693 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
TTC3-208ENST00000428693 NBPF8Q3BBV2 869 aa17.26■□□□□ 0.35
TTC3-208ENST00000428693 CCDC125Q86Z20 511 aa17.26■□□□□ 0.35
TTC3-208ENST00000428693 CHRNA2Q15822 529 aa17.25■□□□□ 0.35
TTC3-208ENST00000428693 KRT27Q7Z3Y8 459 aa17.25■□□□□ 0.35
TTC3-208ENST00000428693 ABTB2Q8N961 1025 aa17.25■□□□□ 0.35
TTC3-208ENST00000428693 STRN4Q9NRL3 753 aa17.25■□□□□ 0.35
TTC3-208ENST00000428693 BRWD3Q6RI45 1802 aa17.24■□□□□ 0.35
TTC3-208ENST00000428693 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
TTC3-208ENST00000428693 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
TTC3-208ENST00000428693 ZBTB7CA1YPR0 619 aa17.23■□□□□ 0.35
TTC3-208ENST00000428693 KIAA0232Q92628 1395 aa17.23■□□□□ 0.35
TTC3-208ENST00000428693 PPIP5K1Q6PFW1 1433 aa17.21■□□□□ 0.35
TTC3-208ENST00000428693 PLEKHG3A1L390 1219 aa17.21■□□□□ 0.35
TTC3-208ENST00000428693 EVA1CP58658 441 aa17.21■□□□□ 0.35
TTC3-208ENST00000428693 USP35Q9P2H5 1018 aa17.21■□□□□ 0.35
TTC3-208ENST00000428693 POLR3AO14802 1390 aaPredicted RBP17.2■□□□□ 0.34
TTC3-208ENST00000428693 ROCK2O75116 1388 aaKnown RBP17.2■□□□□ 0.34
TTC3-208ENST00000428693 DEFB132Q7Z7B7 95 aa17.2■□□□□ 0.34
TTC3-208ENST00000428693 BLMP54132 1417 aaPredicted RBP17.2■□□□□ 0.34
TTC3-208ENST00000428693 QRICH2Q9H0J4 1663 aa17.2■□□□□ 0.34
TTC3-208ENST00000428693 ONECUT3O60422 494 aaPredicted RBP17.19■□□□□ 0.34
TTC3-208ENST00000428693 FAM182BQ5T319 152 aa17.19■□□□□ 0.34
TTC3-208ENST00000428693 CABP1Q9NZU7 370 aa17.19■□□□□ 0.34
TTC3-208ENST00000428693 TOPAZ1Q8N9V7 1692 aa17.19■□□□□ 0.34
TTC3-208ENST00000428693 NRAPQ86VF7 1730 aa17.18■□□□□ 0.34
TTC3-208ENST00000428693 SPATA31A5Q5VU36 1347 aa17.18■□□□□ 0.34
TTC3-208ENST00000428693 EVC2Q86UK5 1308 aa17.18■□□□□ 0.34
TTC3-208ENST00000428693 SPATA31A7Q8IWB4 1347 aa17.18■□□□□ 0.34
TTC3-208ENST00000428693 NLRP13Q86W25 1043 aa17.17■□□□□ 0.34
TTC3-208ENST00000428693 CRYBG1Q9Y4K1 1723 aa17.16■□□□□ 0.34
TTC3-208ENST00000428693 PHRF1Q9P1Y6 1649 aaKnown RBP17.16■□□□□ 0.34
TTC3-208ENST00000428693 NLRP6P59044 892 aa17.14■□□□□ 0.33
TTC3-208ENST00000428693 TRPM1Q7Z4N2 1603 aa17.14■□□□□ 0.33
TTC3-208ENST00000428693 GCP02774 474 aa17.13■□□□□ 0.33
TTC3-208ENST00000428693 BAG6P46379 1132 aa17.13■□□□□ 0.33
TTC3-208ENST00000428693 SPATA31A1Q5TZJ5 1347 aa17.13■□□□□ 0.33
TTC3-208ENST00000428693 SOX12O15370 315 aa17.12■□□□□ 0.33
TTC3-208ENST00000428693 SRCAPQ6ZRS2 3230 aa17.11■□□□□ 0.33
TTC3-208ENST00000428693 LARP1Q6PKG0 1096 aaKnown RBP17.11■□□□□ 0.33
TTC3-208ENST00000428693 CARD11Q9BXL7 1154 aa17.11■□□□□ 0.33
TTC3-208ENST00000428693 TONSLQ96HA7 1378 aa17.11■□□□□ 0.33
TTC3-208ENST00000428693 NRKQ7Z2Y5 1582 aa17.1■□□□□ 0.33
TTC3-208ENST00000428693 PDE3BQ13370 1112 aa17.09■□□□□ 0.33
TTC3-208ENST00000428693 USP19O94966 1318 aa17.09■□□□□ 0.33
TTC3-208ENST00000428693 USP6P35125 1406 aa17.09■□□□□ 0.33
TTC3-208ENST00000428693 SSH2Q76I76 1423 aa17.09■□□□□ 0.33
TTC3-208ENST00000428693 EN1Q05925 392 aaPredicted RBP17.08■□□□□ 0.32
TTC3-208ENST00000428693 BRD4O60885 1362 aaPredicted RBP17.07■□□□□ 0.32
TTC3-208ENST00000428693 TCP11L2Q8N4U5 519 aa17.07■□□□□ 0.32
TTC3-208ENST00000428693 TMC1Q8TDI8 760 aa17.07■□□□□ 0.32
TTC3-208ENST00000428693 CAMTA1Q9Y6Y1 1673 aa17.07■□□□□ 0.32
TTC3-208ENST00000428693 CPDO75976 1380 aa17.06■□□□□ 0.32
TTC3-208ENST00000428693 PSDA5PKW4 1024 aaPredicted RBP17.06■□□□□ 0.32
TTC3-208ENST00000428693 TRIM37O94972 964 aa17.06■□□□□ 0.32
TTC3-208ENST00000428693 ZNF692Q9BU19 519 aaPredicted RBP17.06■□□□□ 0.32
TTC3-208ENST00000428693 THSD7AQ9UPZ6 1657 aa17.05■□□□□ 0.32
TTC3-208ENST00000428693 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
TTC3-208ENST00000428693 KTN1Q86UP2 1357 aaKnown RBP17.04■□□□□ 0.32
TTC3-208ENST00000428693 TTC21BQ7Z4L5 1316 aa17.04■□□□□ 0.32
TTC3-208ENST00000428693 TOM1L2Q6ZVM7 507 aa17.04■□□□□ 0.32
TTC3-208ENST00000428693 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.04■□□□□ 0.32
TTC3-208ENST00000428693 CSB-PGBD3P0DP91 1061 aa17.03■□□□□ 0.32
TTC3-208ENST00000428693 TRIM26Q12899 539 aaPredicted RBP17.03■□□□□ 0.32
TTC3-208ENST00000428693 BARGINQ6ZT62 677 aa17.03■□□□□ 0.32
TTC3-208ENST00000428693 RGPD1P0DJD0 1748 aa17.02■□□□□ 0.32
TTC3-208ENST00000428693 APBA3O96018 575 aa17.02■□□□□ 0.32
TTC3-208ENST00000428693 COL5A2P05997 1499 aaPredicted RBP17.01■□□□□ 0.31
TTC3-208ENST00000428693 EZH2Q15910 746 aaKnown RBP17.01■□□□□ 0.31
TTC3-208ENST00000428693 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
TTC3-208ENST00000428693 THRAP3Q9Y2W1 955 aaKnown RBP17.01■□□□□ 0.31
TTC3-208ENST00000428693 PIK3C2AO00443 1686 aa17.01■□□□□ 0.31
TTC3-208ENST00000428693 LMO7Q8WWI1 1683 aa17.01■□□□□ 0.31
TTC3-208ENST00000428693 TTC21AQ8NDW8 1320 aa16.99■□□□□ 0.31
TTC3-208ENST00000428693 CRB1P82279 1406 aa16.99■□□□□ 0.31
TTC3-208ENST00000428693 HDGFL2Q7Z4V5 671 aaPredicted RBP16.99■□□□□ 0.31
TTC3-208ENST00000428693 AATKQ6ZMQ8 1374 aa16.99■□□□□ 0.31
TTC3-208ENST00000428693 SLIT3O75094 1523 aa16.98■□□□□ 0.31
TTC3-208ENST00000428693 R3HDM1Q15032 1099 aaKnown RBP16.98■□□□□ 0.31
TTC3-208ENST00000428693 AXIN2Q9Y2T1 843 aa16.98■□□□□ 0.31
TTC3-208ENST00000428693 AKAP12Q02952 1782 aa16.97■□□□□ 0.31
TTC3-208ENST00000428693 SLC12A5Q9H2X9 1139 aa16.97■□□□□ 0.31
TTC3-208ENST00000428693 DDB1Q16531 1140 aa16.96■□□□□ 0.31
TTC3-208ENST00000428693 ARHGEF25Q86VW2 580 aa16.96■□□□□ 0.31
TTC3-208ENST00000428693 CPSF1Q10570 1443 aaKnown RBP16.96■□□□□ 0.3
TTC3-208ENST00000428693 NME9Q86XW9 330 aa16.95■□□□□ 0.3
TTC3-208ENST00000428693 TNS1Q9HBL0 1735 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms