RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 PLEKHG3A1L390 1219 aa14.79□□□□□ -0.04
ZNF3-208ENST00000428683 ONECUT3O60422 494 aaPredicted RBP14.79□□□□□ -0.04
ZNF3-208ENST00000428683 ATP7BP35670 1465 aa14.79□□□□□ -0.04
ZNF3-208ENST00000428683 ZC3H6P61129 1189 aaKnown RBP14.79□□□□□ -0.04
ZNF3-208ENST00000428683 FAM98CQ17RN3 349 aaKnown RBP14.79□□□□□ -0.04
ZNF3-208ENST00000428683 CCDC125Q86Z20 511 aa14.79□□□□□ -0.04
ZNF3-208ENST00000428683 PRDM11Q9NQV5 511 aa14.79□□□□□ -0.04
ZNF3-208ENST00000428683 ARHGEF28Q8N1W1 1705 aaKnown RBP14.78□□□□□ -0.04
ZNF3-208ENST00000428683 CHRNA2Q15822 529 aa14.78□□□□□ -0.04
ZNF3-208ENST00000428683 ABTB2Q8N961 1025 aa14.78□□□□□ -0.04
ZNF3-208ENST00000428683 KRT27Q7Z3Y8 459 aa14.77□□□□□ -0.05
ZNF3-208ENST00000428683 TRPM3Q9HCF6 1732 aaPredicted RBP14.76□□□□□ -0.05
ZNF3-208ENST00000428683 DEFB132Q7Z7B7 95 aa14.76□□□□□ -0.05
ZNF3-208ENST00000428683 STRN4Q9NRL3 753 aa14.76□□□□□ -0.05
ZNF3-208ENST00000428683 CABP1Q9NZU7 370 aa14.76□□□□□ -0.05
ZNF3-208ENST00000428683 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.75□□□□□ -0.05
ZNF3-208ENST00000428683 KIAA0232Q92628 1395 aa14.75□□□□□ -0.05
ZNF3-208ENST00000428683 ZRANB1Q9UGI0 708 aa14.75□□□□□ -0.05
ZNF3-208ENST00000428683 POLR3AO14802 1390 aaPredicted RBP14.74□□□□□ -0.05
ZNF3-208ENST00000428683 SF3B2Q13435 895 aaKnown RBP14.74□□□□□ -0.05
ZNF3-208ENST00000428683 FAM182BQ5T319 152 aa14.74□□□□□ -0.05
ZNF3-208ENST00000428683 ALS2Q96Q42 1657 aa14.74□□□□□ -0.05
ZNF3-208ENST00000428683 SPATA31A5Q5VU36 1347 aa14.73□□□□□ -0.05
ZNF3-208ENST00000428683 SPATA31A7Q8IWB4 1347 aa14.73□□□□□ -0.05
ZNF3-208ENST00000428683 KIAA1210Q9ULL0 1709 aa14.73□□□□□ -0.05
ZNF3-208ENST00000428683 EVA1CP58658 441 aa14.73□□□□□ -0.05
ZNF3-208ENST00000428683 PLCH1Q4KWH8 1693 aa14.73□□□□□ -0.05
ZNF3-208ENST00000428683 PPIP5K1Q6PFW1 1433 aa14.73□□□□□ -0.05
ZNF3-208ENST00000428683 ABCA3Q99758 1704 aa14.72□□□□□ -0.05
ZNF3-208ENST00000428683 USP35Q9P2H5 1018 aa14.72□□□□□ -0.05
ZNF3-208ENST00000428683 BLMP54132 1417 aaPredicted RBP14.72□□□□□ -0.05
ZNF3-208ENST00000428683 ZBTB7CA1YPR0 619 aa14.71□□□□□ -0.05
ZNF3-208ENST00000428683 NLRP13Q86W25 1043 aa14.71□□□□□ -0.05
ZNF3-208ENST00000428683 NWD2Q9ULI1 1742 aa14.71□□□□□ -0.05
ZNF3-208ENST00000428683 ROCK2O75116 1388 aaKnown RBP14.71□□□□□ -0.06
ZNF3-208ENST00000428683 EVC2Q86UK5 1308 aa14.7□□□□□ -0.06
ZNF3-208ENST00000428683 SPATA31A1Q5TZJ5 1347 aa14.69□□□□□ -0.06
ZNF3-208ENST00000428683 GCP02774 474 aa14.69□□□□□ -0.06
ZNF3-208ENST00000428683 NLRP6P59044 892 aa14.69□□□□□ -0.06
ZNF3-208ENST00000428683 COL14A1Q05707 1796 aaKnown RBP14.69□□□□□ -0.06
ZNF3-208ENST00000428683 ITSN1Q15811 1721 aa14.69□□□□□ -0.06
ZNF3-208ENST00000428683 BRWD3Q6RI45 1802 aa14.68□□□□□ -0.06
ZNF3-208ENST00000428683 LARP1Q6PKG0 1096 aaKnown RBP14.67□□□□□ -0.06
ZNF3-208ENST00000428683 NRAPQ86VF7 1730 aa14.66□□□□□ -0.06
ZNF3-208ENST00000428683 USP19O94966 1318 aa14.66□□□□□ -0.06
ZNF3-208ENST00000428683 TOPAZ1Q8N9V7 1692 aa14.65□□□□□ -0.06
ZNF3-208ENST00000428683 BAG6P46379 1132 aa14.65□□□□□ -0.06
ZNF3-208ENST00000428683 CARD11Q9BXL7 1154 aa14.65□□□□□ -0.06
ZNF3-208ENST00000428683 CRYBG1Q9Y4K1 1723 aa14.64□□□□□ -0.07
ZNF3-208ENST00000428683 EN1Q05925 392 aaPredicted RBP14.64□□□□□ -0.07
ZNF3-208ENST00000428683 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
ZNF3-208ENST00000428683 USP6P35125 1406 aa14.64□□□□□ -0.07
ZNF3-208ENST00000428683 QRICH2Q9H0J4 1663 aa14.63□□□□□ -0.07
ZNF3-208ENST00000428683 SOX12O15370 315 aa14.63□□□□□ -0.07
ZNF3-208ENST00000428683 PDE3BQ13370 1112 aa14.63□□□□□ -0.07
ZNF3-208ENST00000428683 EP400Q96L91 3159 aa14.63□□□□□ -0.07
ZNF3-208ENST00000428683 BRD4O60885 1362 aaPredicted RBP14.62□□□□□ -0.07
ZNF3-208ENST00000428683 CPDO75976 1380 aa14.62□□□□□ -0.07
ZNF3-208ENST00000428683 CAMTA1Q9Y6Y1 1673 aa14.62□□□□□ -0.07
ZNF3-208ENST00000428683 TRIM37O94972 964 aa14.62□□□□□ -0.07
ZNF3-208ENST00000428683 BARGINQ6ZT62 677 aa14.62□□□□□ -0.07
ZNF3-208ENST00000428683 SSH2Q76I76 1423 aa14.62□□□□□ -0.07
ZNF3-208ENST00000428683 TCP11L2Q8N4U5 519 aa14.62□□□□□ -0.07
ZNF3-208ENST00000428683 TRPM1Q7Z4N2 1603 aa14.62□□□□□ -0.07
ZNF3-208ENST00000428683 PHRF1Q9P1Y6 1649 aaKnown RBP14.62□□□□□ -0.07
ZNF3-208ENST00000428683 TTC21BQ7Z4L5 1316 aa14.62□□□□□ -0.07
ZNF3-208ENST00000428683 TONSLQ96HA7 1378 aa14.61□□□□□ -0.07
ZNF3-208ENST00000428683 PSDA5PKW4 1024 aaPredicted RBP14.61□□□□□ -0.07
ZNF3-208ENST00000428683 FAM196AQ6ZSG2 479 aa14.61□□□□□ -0.07
ZNF3-208ENST00000428683 TRIM26Q12899 539 aaPredicted RBP14.6□□□□□ -0.07
ZNF3-208ENST00000428683 TMC1Q8TDI8 760 aa14.6□□□□□ -0.07
ZNF3-208ENST00000428683 NRKQ7Z2Y5 1582 aa14.6□□□□□ -0.07
ZNF3-208ENST00000428683 EZH2Q15910 746 aaKnown RBP14.59□□□□□ -0.07
ZNF3-208ENST00000428683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.59□□□□□ -0.07
ZNF3-208ENST00000428683 AXIN2Q9Y2T1 843 aa14.59□□□□□ -0.07
ZNF3-208ENST00000428683 APBA3O96018 575 aa14.58□□□□□ -0.08
ZNF3-208ENST00000428683 TOM1L2Q6ZVM7 507 aa14.58□□□□□ -0.08
ZNF3-208ENST00000428683 THRAP3Q9Y2W1 955 aaKnown RBP14.58□□□□□ -0.08
ZNF3-208ENST00000428683 KTN1Q86UP2 1357 aaKnown RBP14.58□□□□□ -0.08
ZNF3-208ENST00000428683 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
ZNF3-208ENST00000428683 SLC12A5Q9H2X9 1139 aa14.57□□□□□ -0.08
ZNF3-208ENST00000428683 THSD7AQ9UPZ6 1657 aa14.56□□□□□ -0.08
ZNF3-208ENST00000428683 ARHGEF25Q86VW2 580 aa14.56□□□□□ -0.08
ZNF3-208ENST00000428683 TTC21AQ8NDW8 1320 aa14.56□□□□□ -0.08
ZNF3-208ENST00000428683 AATKQ6ZMQ8 1374 aa14.56□□□□□ -0.08
ZNF3-208ENST00000428683 COL5A2P05997 1499 aaPredicted RBP14.56□□□□□ -0.08
ZNF3-208ENST00000428683 CSB-PGBD3P0DP91 1061 aa14.55□□□□□ -0.08
ZNF3-208ENST00000428683 CAMKK2Q96RR4 588 aa14.55□□□□□ -0.08
ZNF3-208ENST00000428683 R3HDM1Q15032 1099 aaKnown RBP14.54□□□□□ -0.08
ZNF3-208ENST00000428683 HDGFL2Q7Z4V5 671 aaPredicted RBP14.54□□□□□ -0.08
ZNF3-208ENST00000428683 NME9Q86XW9 330 aa14.54□□□□□ -0.08
ZNF3-208ENST00000428683 CRB1P82279 1406 aa14.54□□□□□ -0.08
ZNF3-208ENST00000428683 CPSF1Q10570 1443 aaKnown RBP14.54□□□□□ -0.08
ZNF3-208ENST00000428683 LMO7Q8WWI1 1683 aa14.53□□□□□ -0.08
ZNF3-208ENST00000428683 SLIT3O75094 1523 aa14.53□□□□□ -0.08
ZNF3-208ENST00000428683 ST20-MTHFSA0A0A6YYL1 179 aa14.53□□□□□ -0.08
ZNF3-208ENST00000428683 DDB1Q16531 1140 aa14.53□□□□□ -0.08
ZNF3-208ENST00000428683 SBNO2Q9Y2G9 1366 aa14.52□□□□□ -0.08
ZNF3-208ENST00000428683 WDR17Q8IZU2 1322 aa14.52□□□□□ -0.08
ZNF3-208ENST00000428683 PIK3C2AO00443 1686 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms