RNA–Protein interactions for RNA: ENST00000428557.1

AC006001.2-203, humanhuman

TSL 3

Gene AC006001.2, Length 304 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.2-203ENST00000428557 CDK12Q9NYV4 1490 aaPredicted RBP16.83■□□□□ 0.28
AC006001.2-203ENST00000428557 PPIP5K1Q6PFW1 1433 aa16.82■□□□□ 0.28
AC006001.2-203ENST00000428557 POLR3AO14802 1390 aaPredicted RBP16.82■□□□□ 0.28
AC006001.2-203ENST00000428557 ABTB2Q8N961 1025 aa16.82■□□□□ 0.28
AC006001.2-203ENST00000428557 PRDM11Q9NQV5 511 aa16.8■□□□□ 0.28
AC006001.2-203ENST00000428557 BTG4Q9NY30 223 aa16.8■□□□□ 0.28
AC006001.2-203ENST00000428557 SLIT2O94813 1529 aa16.8■□□□□ 0.28
AC006001.2-203ENST00000428557 ZC3H6P61129 1189 aaKnown RBP16.79■□□□□ 0.28
AC006001.2-203ENST00000428557 VPS72Q15906 364 aa16.79■□□□□ 0.28
AC006001.2-203ENST00000428557 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
AC006001.2-203ENST00000428557 CHRNA2Q15822 529 aa16.77■□□□□ 0.28
AC006001.2-203ENST00000428557 NLRP13Q86W25 1043 aa16.76■□□□□ 0.27
AC006001.2-203ENST00000428557 RALGAPBQ86X10 1494 aa16.75■□□□□ 0.27
AC006001.2-203ENST00000428557 A0A0G2JS52 829 aa16.75■□□□□ 0.27
AC006001.2-203ENST00000428557 MYT1Q01538 1121 aa16.75■□□□□ 0.27
AC006001.2-203ENST00000428557 KIAA0232Q92628 1395 aa16.75■□□□□ 0.27
AC006001.2-203ENST00000428557 NLRP6P59044 892 aa16.74■□□□□ 0.27
AC006001.2-203ENST00000428557 SEPT12Q8IYM1 358 aa16.74■□□□□ 0.27
AC006001.2-203ENST00000428557 TMC1Q8TDI8 760 aa16.74■□□□□ 0.27
AC006001.2-203ENST00000428557 ZNF692Q9BU19 519 aaPredicted RBP16.74■□□□□ 0.27
AC006001.2-203ENST00000428557 TRPM3Q9HCF6 1732 aaPredicted RBP16.73■□□□□ 0.27
AC006001.2-203ENST00000428557 ZBTB7CA1YPR0 619 aa16.73■□□□□ 0.27
AC006001.2-203ENST00000428557 GCP02774 474 aa16.73■□□□□ 0.27
AC006001.2-203ENST00000428557 STRN4Q9NRL3 753 aa16.73■□□□□ 0.27
AC006001.2-203ENST00000428557 ATAD2Q6PL18 1390 aa16.73■□□□□ 0.27
AC006001.2-203ENST00000428557 ST20-MTHFSA0A0A6YYL1 179 aa16.72■□□□□ 0.27
AC006001.2-203ENST00000428557 EVA1CP58658 441 aa16.72■□□□□ 0.27
AC006001.2-203ENST00000428557 QRICH2Q9H0J4 1663 aa16.72■□□□□ 0.27
AC006001.2-203ENST00000428557 USP6P35125 1406 aa16.71■□□□□ 0.27
AC006001.2-203ENST00000428557 FAM98CQ17RN3 349 aaKnown RBP16.71■□□□□ 0.27
AC006001.2-203ENST00000428557 BRD4O60885 1362 aaPredicted RBP16.71■□□□□ 0.27
AC006001.2-203ENST00000428557 ALS2Q96Q42 1657 aa16.7■□□□□ 0.26
AC006001.2-203ENST00000428557 CCER1Q8TC90 406 aaPredicted RBP16.7■□□□□ 0.26
AC006001.2-203ENST00000428557 ITSN1Q15811 1721 aa16.7■□□□□ 0.26
AC006001.2-203ENST00000428557 USP19O94966 1318 aa16.7■□□□□ 0.26
AC006001.2-203ENST00000428557 TTC21BQ7Z4L5 1316 aa16.7■□□□□ 0.26
AC006001.2-203ENST00000428557 SBNO2Q9Y2G9 1366 aa16.69■□□□□ 0.26
AC006001.2-203ENST00000428557 ONECUT3O60422 494 aaPredicted RBP16.69■□□□□ 0.26
AC006001.2-203ENST00000428557 SLC12A5Q9H2X9 1139 aa16.69■□□□□ 0.26
AC006001.2-203ENST00000428557 TOPAZ1Q8N9V7 1692 aa16.69■□□□□ 0.26
AC006001.2-203ENST00000428557 KTN1Q86UP2 1357 aaKnown RBP16.68■□□□□ 0.26
AC006001.2-203ENST00000428557 SOX12O15370 315 aa16.68■□□□□ 0.26
AC006001.2-203ENST00000428557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.68■□□□□ 0.26
AC006001.2-203ENST00000428557 SPATA31A5Q5VU36 1347 aa16.68■□□□□ 0.26
AC006001.2-203ENST00000428557 SPATA31A7Q8IWB4 1347 aa16.68■□□□□ 0.26
AC006001.2-203ENST00000428557 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
AC006001.2-203ENST00000428557 TIMELESSQ9UNS1 1208 aa16.67■□□□□ 0.26
AC006001.2-203ENST00000428557 CLSPNQ9HAW4 1339 aa16.67■□□□□ 0.26
AC006001.2-203ENST00000428557 GLI3P10071 1580 aa16.66■□□□□ 0.26
AC006001.2-203ENST00000428557 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
AC006001.2-203ENST00000428557 HDGFL2Q7Z4V5 671 aaPredicted RBP16.66■□□□□ 0.26
AC006001.2-203ENST00000428557 TESK2Q96S53 571 aa16.66■□□□□ 0.26
AC006001.2-203ENST00000428557 MARF1Q9Y4F3 1742 aaKnown RBP16.66■□□□□ 0.26
AC006001.2-203ENST00000428557 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
AC006001.2-203ENST00000428557 SLC24A1O60721 1099 aa16.65■□□□□ 0.26
AC006001.2-203ENST00000428557 TTC21AQ8NDW8 1320 aa16.65■□□□□ 0.26
AC006001.2-203ENST00000428557 CPDO75976 1380 aa16.64■□□□□ 0.26
AC006001.2-203ENST00000428557 CPSF1Q10570 1443 aaKnown RBP16.64■□□□□ 0.25
AC006001.2-203ENST00000428557 LARP1Q6PKG0 1096 aaKnown RBP16.64■□□□□ 0.25
AC006001.2-203ENST00000428557 TERF2IPQ9NYB0 399 aa16.64■□□□□ 0.25
AC006001.2-203ENST00000428557 ABCA3Q99758 1704 aa16.64■□□□□ 0.25
AC006001.2-203ENST00000428557 PUS7Q96PZ0 661 aaKnown RBP16.63■□□□□ 0.25
AC006001.2-203ENST00000428557 ZRANB1Q9UGI0 708 aa16.63■□□□□ 0.25
AC006001.2-203ENST00000428557 SPATA31A1Q5TZJ5 1347 aa16.63■□□□□ 0.25
AC006001.2-203ENST00000428557 USP47Q96K76 1375 aa16.63■□□□□ 0.25
AC006001.2-203ENST00000428557 COL14A1Q05707 1796 aaKnown RBP16.62■□□□□ 0.25
AC006001.2-203ENST00000428557 CCDC125Q86Z20 511 aa16.62■□□□□ 0.25
AC006001.2-203ENST00000428557 KCNH5Q8NCM2 988 aa16.62■□□□□ 0.25
AC006001.2-203ENST00000428557 PLCH1Q4KWH8 1693 aa16.62■□□□□ 0.25
AC006001.2-203ENST00000428557 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.62■□□□□ 0.25
AC006001.2-203ENST00000428557 TMF1P82094 1093 aa16.61■□□□□ 0.25
AC006001.2-203ENST00000428557 NME9Q86XW9 330 aa16.61■□□□□ 0.25
AC006001.2-203ENST00000428557 SF3B2Q13435 895 aaKnown RBP16.6■□□□□ 0.25
AC006001.2-203ENST00000428557 FAM182BQ5T319 152 aa16.6■□□□□ 0.25
AC006001.2-203ENST00000428557 NWD2Q9ULI1 1742 aa16.59■□□□□ 0.25
AC006001.2-203ENST00000428557 TCP11L2Q8N4U5 519 aa16.59■□□□□ 0.25
AC006001.2-203ENST00000428557 ARHGEF25Q86VW2 580 aa16.58■□□□□ 0.24
AC006001.2-203ENST00000428557 AXIN2Q9Y2T1 843 aa16.58■□□□□ 0.24
AC006001.2-203ENST00000428557 AATKQ6ZMQ8 1374 aa16.58■□□□□ 0.24
AC006001.2-203ENST00000428557 CAMTA1Q9Y6Y1 1673 aa16.57■□□□□ 0.24
AC006001.2-203ENST00000428557 NRKQ7Z2Y5 1582 aa16.57■□□□□ 0.24
AC006001.2-203ENST00000428557 A0A1W2PP64 1363 aa16.57■□□□□ 0.24
AC006001.2-203ENST00000428557 TOM1L2Q6ZVM7 507 aa16.57■□□□□ 0.24
AC006001.2-203ENST00000428557 CRYBG1Q9Y4K1 1723 aa16.56■□□□□ 0.24
AC006001.2-203ENST00000428557 PHRF1Q9P1Y6 1649 aaKnown RBP16.56■□□□□ 0.24
AC006001.2-203ENST00000428557 CD163L1Q9NR16 1453 aa16.56■□□□□ 0.24
AC006001.2-203ENST00000428557 CSB-PGBD3P0DP91 1061 aa16.56■□□□□ 0.24
AC006001.2-203ENST00000428557 PDE3BQ13370 1112 aa16.56■□□□□ 0.24
AC006001.2-203ENST00000428557 BARGINQ6ZT62 677 aa16.56■□□□□ 0.24
AC006001.2-203ENST00000428557 BLMP54132 1417 aaPredicted RBP16.55■□□□□ 0.24
AC006001.2-203ENST00000428557 CDCA8Q53HL2 280 aa16.55■□□□□ 0.24
AC006001.2-203ENST00000428557 DEFB132Q7Z7B7 95 aa16.55■□□□□ 0.24
AC006001.2-203ENST00000428557 SLIT3O75094 1523 aa16.55■□□□□ 0.24
AC006001.2-203ENST00000428557 EDC4Q6P2E9 1401 aaKnown RBP16.54■□□□□ 0.24
AC006001.2-203ENST00000428557 NINLQ9Y2I6 1382 aa16.54■□□□□ 0.24
AC006001.2-203ENST00000428557 NRAPQ86VF7 1730 aa16.54■□□□□ 0.24
AC006001.2-203ENST00000428557 THRAP3Q9Y2W1 955 aaKnown RBP16.54■□□□□ 0.24
AC006001.2-203ENST00000428557 USP31Q70CQ4 1352 aa16.53■□□□□ 0.24
AC006001.2-203ENST00000428557 COL5A2P05997 1499 aaPredicted RBP16.53■□□□□ 0.24
AC006001.2-203ENST00000428557 PIK3C2AO00443 1686 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms