RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 SHPRHQ149N8 1683 aa16.37■□□□□ 0.21
RFC4-206ENST00000427785 NGDNQ8NEJ9 315 aaKnown RBP16.36■□□□□ 0.21
RFC4-206ENST00000427785 SSH2Q76I76 1423 aa16.36■□□□□ 0.21
RFC4-206ENST00000427785 ATF3P18847 181 aa16.35■□□□□ 0.21
RFC4-206ENST00000427785 PPP2R1AP30153 589 aa16.35■□□□□ 0.21
RFC4-206ENST00000427785 AEBP2Q6ZN18 517 aaPredicted RBP16.35■□□□□ 0.21
RFC4-206ENST00000427785 MORC1Q86VD1 984 aa16.35■□□□□ 0.21
RFC4-206ENST00000427785 NLRP13Q86W25 1043 aa16.35■□□□□ 0.21
RFC4-206ENST00000427785 NME9Q86XW9 330 aa16.35■□□□□ 0.21
RFC4-206ENST00000427785 PHF8Q9UPP1 1060 aa16.35■□□□□ 0.21
RFC4-206ENST00000427785 TNNT2P45379 298 aaPredicted RBP16.34■□□□□ 0.21
RFC4-206ENST00000427785 ESCO1Q5FWF5 840 aa16.34■□□□□ 0.21
RFC4-206ENST00000427785 OVOS2A0A0J9YW53 1432 aa16.34■□□□□ 0.21
RFC4-206ENST00000427785 OVOS2Q6IE36 1432 aa16.34■□□□□ 0.21
RFC4-206ENST00000427785 ALS2Q96Q42 1657 aa16.34■□□□□ 0.21
RFC4-206ENST00000427785 FYB1O15117 783 aa16.33■□□□□ 0.2
RFC4-206ENST00000427785 ORAI2Q96SN7 254 aa16.33■□□□□ 0.2
RFC4-206ENST00000427785 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.2
RFC4-206ENST00000427785 TTC21BQ7Z4L5 1316 aa16.33■□□□□ 0.2
RFC4-206ENST00000427785 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
RFC4-206ENST00000427785 LTN1O94822 1766 aa16.31■□□□□ 0.2
RFC4-206ENST00000427785 NHSL1Q5SYE7 1610 aa16.31■□□□□ 0.2
RFC4-206ENST00000427785 CADPS2Q86UW7 1296 aa16.31■□□□□ 0.2
RFC4-206ENST00000427785 TTC21AQ8NDW8 1320 aa16.29■□□□□ 0.2
RFC4-206ENST00000427785 PEAK1Q9H792 1746 aa16.29■□□□□ 0.2
RFC4-206ENST00000427785 ROBO1Q9Y6N7 1651 aa16.28■□□□□ 0.2
RFC4-206ENST00000427785 CRYBG1Q9Y4K1 1723 aa16.28■□□□□ 0.2
RFC4-206ENST00000427785 PHRF1Q9P1Y6 1649 aaKnown RBP16.27■□□□□ 0.2
RFC4-206ENST00000427785 XPCQ01831 940 aaPredicted RBP16.27■□□□□ 0.2
RFC4-206ENST00000427785 FAM9BQ8IZU0 186 aa16.27■□□□□ 0.2
RFC4-206ENST00000427785 COL3A1P02461 1466 aaPredicted RBP16.27■□□□□ 0.19
RFC4-206ENST00000427785 COG3Q96JB2 828 aa16.26■□□□□ 0.19
RFC4-206ENST00000427785 PXDNQ92626 1479 aa16.26■□□□□ 0.19
RFC4-206ENST00000427785 ABCA3Q99758 1704 aa16.25■□□□□ 0.19
RFC4-206ENST00000427785 FOXO3O43524 673 aa16.25■□□□□ 0.19
RFC4-206ENST00000427785 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
RFC4-206ENST00000427785 SMG6Q86US8 1419 aaKnown RBP16.25■□□□□ 0.19
RFC4-206ENST00000427785 CDK12Q9NYV4 1490 aaPredicted RBP16.24■□□□□ 0.19
RFC4-206ENST00000427785 DDX17Q92841 729 aaKnown RBP16.24■□□□□ 0.19
RFC4-206ENST00000427785 USP31Q70CQ4 1352 aa16.24■□□□□ 0.19
RFC4-206ENST00000427785 PSME1Q06323 249 aa16.23■□□□□ 0.19
RFC4-206ENST00000427785 PNISRQ8TF01 805 aaKnown RBP16.23■□□□□ 0.19
RFC4-206ENST00000427785 SCAF1Q9H7N4 1312 aaKnown RBP16.22■□□□□ 0.19
RFC4-206ENST00000427785 FBLN1P23142 703 aa16.22■□□□□ 0.19
RFC4-206ENST00000427785 MTHFSP49914 203 aa16.22■□□□□ 0.19
RFC4-206ENST00000427785 NUTM2GQ5VZR2 741 aa16.22■□□□□ 0.19
RFC4-206ENST00000427785 BRINP3Q76B58 766 aa16.22■□□□□ 0.19
RFC4-206ENST00000427785 SLIT3O75094 1523 aa16.22■□□□□ 0.19
RFC4-206ENST00000427785 NFAT5O94916 1531 aa16.22■□□□□ 0.19
RFC4-206ENST00000427785 AATKQ6ZMQ8 1374 aa16.21■□□□□ 0.19
RFC4-206ENST00000427785 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.18
RFC4-206ENST00000427785 NPHP3Q7Z494 1330 aa16.2■□□□□ 0.18
RFC4-206ENST00000427785 BLMP54132 1417 aaPredicted RBP16.2■□□□□ 0.18
RFC4-206ENST00000427785 TNS3Q68CZ2 1445 aa16.2■□□□□ 0.18
RFC4-206ENST00000427785 SOX12O15370 315 aa16.2■□□□□ 0.18
RFC4-206ENST00000427785 KRT28Q7Z3Y7 464 aa16.2■□□□□ 0.18
RFC4-206ENST00000427785 RGPD5Q99666 1765 aa16.19■□□□□ 0.18
RFC4-206ENST00000427785 NLRP6P59044 892 aa16.19■□□□□ 0.18
RFC4-206ENST00000427785 ABTB2Q8N961 1025 aa16.19■□□□□ 0.18
RFC4-206ENST00000427785 SLAIN2Q9P270 581 aa16.19■□□□□ 0.18
RFC4-206ENST00000427785 EMILIN1Q9Y6C2 1016 aa16.19■□□□□ 0.18
RFC4-206ENST00000427785 PHLPP1O60346 1717 aa16.19■□□□□ 0.18
RFC4-206ENST00000427785 AHDC1Q5TGY3 1603 aaPredicted RBP16.19■□□□□ 0.18
RFC4-206ENST00000427785 RRS1Q15050 365 aaKnown RBP16.18■□□□□ 0.18
RFC4-206ENST00000427785 WDR43Q15061 677 aaKnown RBP eCLIP16.18■□□□□ 0.18
RFC4-206ENST00000427785 CFAP53Q96M91 514 aa16.18■□□□□ 0.18
RFC4-206ENST00000427785 SBNO1A3KN83 1393 aa16.17■□□□□ 0.18
RFC4-206ENST00000427785 HNRNPUQ00839 825 aaKnown RBP eCLIP16.17■□□□□ 0.18
RFC4-206ENST00000427785 POLKQ9UBT6 870 aa16.17■□□□□ 0.18
RFC4-206ENST00000427785 RGPD1P0DJD0 1748 aa16.16■□□□□ 0.18
RFC4-206ENST00000427785 RGPD2P0DJD1 1756 aa16.16■□□□□ 0.18
RFC4-206ENST00000427785 PPM1GO15355 546 aaPredicted RBP16.16■□□□□ 0.18
RFC4-206ENST00000427785 LMOD2Q6P5Q4 547 aa16.16■□□□□ 0.18
RFC4-206ENST00000427785 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
RFC4-206ENST00000427785 PNPLA6Q8IY17 1366 aa16.14■□□□□ 0.17
RFC4-206ENST00000427785 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
RFC4-206ENST00000427785 USP19O94966 1318 aa16.14■□□□□ 0.17
RFC4-206ENST00000427785 COL16A1Q07092 1604 aaPredicted RBP16.13■□□□□ 0.17
RFC4-206ENST00000427785 IQSEC2Q5JU85 1478 aa16.13■□□□□ 0.17
RFC4-206ENST00000427785 MAP3K19Q56UN5 1328 aa16.13■□□□□ 0.17
RFC4-206ENST00000427785 ADAMTS8Q9UP79 889 aa16.12■□□□□ 0.17
RFC4-206ENST00000427785 INSRP06213 1382 aa16.12■□□□□ 0.17
RFC4-206ENST00000427785 SOS2Q07890 1332 aaPredicted RBP16.11■□□□□ 0.17
RFC4-206ENST00000427785 SPATA31A3Q5VYP0 1347 aa16.11■□□□□ 0.17
RFC4-206ENST00000427785 ARHGEF10O15013 1369 aa16.11■□□□□ 0.17
RFC4-206ENST00000427785 FLT4P35916 1363 aa16.11■□□□□ 0.17
RFC4-206ENST00000427785 COL18A1P39060 1754 aa16.1■□□□□ 0.17
RFC4-206ENST00000427785 RTL1A6NKG5 1358 aa16.1■□□□□ 0.17
RFC4-206ENST00000427785 DLG5Q8TDM6 1919 aa16.09■□□□□ 0.17
RFC4-206ENST00000427785 COL22A1Q8NFW1 1626 aaPredicted RBP16.09■□□□□ 0.17
RFC4-206ENST00000427785 DIAPH1O60610 1272 aaKnown RBP16.09■□□□□ 0.17
RFC4-206ENST00000427785 CCDC146Q8IYE0 955 aa16.09■□□□□ 0.17
RFC4-206ENST00000427785 ZBTB7CA1YPR0 619 aa16.08■□□□□ 0.16
RFC4-206ENST00000427785 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.16
RFC4-206ENST00000427785 CENPBP07199 599 aaPredicted RBP16.08■□□□□ 0.16
RFC4-206ENST00000427785 U2AF1L5P0DN76 240 aaPredicted RBP16.07■□□□□ 0.16
RFC4-206ENST00000427785 AMPHP49418 695 aa16.07■□□□□ 0.16
RFC4-206ENST00000427785 U2AF1Q01081 240 aaKnown RBP eCLIP16.07■□□□□ 0.16
RFC4-206ENST00000427785 CAMTA1Q9Y6Y1 1673 aa16.07■□□□□ 0.16
RFC4-206ENST00000427785 FAM208AQ9UK61 1670 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms