RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 ACEP12821 1306 aa35.21■■■■□ 3.23
SH3GL3-202ENST00000427482 RNF123Q5XPI4 1314 aa35.21■■■■□ 3.23
SH3GL3-202ENST00000427482 NUTM2FA1L443 756 aa35.2■■■■□ 3.23
SH3GL3-202ENST00000427482 NME9Q86XW9 330 aa35.2■■■■□ 3.23
SH3GL3-202ENST00000427482 APAF1O14727 1248 aa35.2■■■■□ 3.23
SH3GL3-202ENST00000427482 ANKARQ7Z5J8 1434 aa35.19■■■■□ 3.22
SH3GL3-202ENST00000427482 NGEFQ8N5V2 710 aa35.19■■■■□ 3.22
SH3GL3-202ENST00000427482 PNPLA6Q8IY17 1366 aa35.18■■■■□ 3.22
SH3GL3-202ENST00000427482 USP6P35125 1406 aa35.18■■■■□ 3.22
SH3GL3-202ENST00000427482 IQSEC2Q5JU85 1478 aa35.17■■■■□ 3.22
SH3GL3-202ENST00000427482 IRX6P78412 446 aaPredicted RBP35.17■■■■□ 3.22
SH3GL3-202ENST00000427482 NWD1Q149M9 1564 aa35.15■■■■□ 3.22
SH3GL3-202ENST00000427482 ERICH6BQ5W0A0 696 aa35.15■■■■□ 3.22
SH3GL3-202ENST00000427482 RUNDC1Q96C34 613 aa35.15■■■■□ 3.22
SH3GL3-202ENST00000427482 TTC21BQ7Z4L5 1316 aa35.13■■■■□ 3.21
SH3GL3-202ENST00000427482 AATKQ6ZMQ8 1374 aa35.12■■■■□ 3.21
SH3GL3-202ENST00000427482 COG3Q96JB2 828 aa35.12■■■■□ 3.21
SH3GL3-202ENST00000427482 ZRANB1Q9UGI0 708 aa35.12■■■■□ 3.21
SH3GL3-202ENST00000427482 SSH2Q76I76 1423 aa35.12■■■■□ 3.21
SH3GL3-202ENST00000427482 POLKQ9UBT6 870 aa35.11■■■■□ 3.21
SH3GL3-202ENST00000427482 GOLGA2Q08379 1002 aa35.09■■■■□ 3.21
SH3GL3-202ENST00000427482 U2AF1L5P0DN76 240 aaPredicted RBP35.09■■■■□ 3.21
SH3GL3-202ENST00000427482 U2AF1Q01081 240 aaKnown RBP eCLIP35.09■■■■□ 3.21
SH3GL3-202ENST00000427482 RCAN3Q9UKA8 241 aa35.07■■■■□ 3.2
SH3GL3-202ENST00000427482 CDK12Q9NYV4 1490 aaPredicted RBP35.07■■■■□ 3.2
SH3GL3-202ENST00000427482 OVOS2A0A0J9YW53 1432 aa35.06■■■■□ 3.2
SH3GL3-202ENST00000427482 OVOS2Q6IE36 1432 aa35.06■■■■□ 3.2
SH3GL3-202ENST00000427482 ADGRL3Q9HAR2 1447 aa35.06■■■■□ 3.2
SH3GL3-202ENST00000427482 DIAPH1O60610 1272 aaKnown RBP35.06■■■■□ 3.2
SH3GL3-202ENST00000427482 FBLN1P23142 703 aa35.04■■■■□ 3.2
SH3GL3-202ENST00000427482 PMFBP1Q8TBY8 1022 aa35.04■■■■□ 3.2
SH3GL3-202ENST00000427482 DUSP27Q5VZP5 1158 aa35.03■■■■□ 3.2
SH3GL3-202ENST00000427482 TTC21AQ8NDW8 1320 aa35.03■■■■□ 3.2
SH3GL3-202ENST00000427482 SLFN5Q08AF3 891 aa35.02■■■■□ 3.2
SH3GL3-202ENST00000427482 TCP11L2Q8N4U5 519 aa35.02■■■■□ 3.2
SH3GL3-202ENST00000427482 U2SURPO15042 1029 aaKnown RBP35.02■■■■□ 3.2
SH3GL3-202ENST00000427482 NGDNQ8NEJ9 315 aaKnown RBP35■■■■□ 3.19
SH3GL3-202ENST00000427482 TRMT2AQ8IZ69 625 aaKnown RBP34.99■■■■□ 3.19
SH3GL3-202ENST00000427482 EMILIN1Q9Y6C2 1016 aa34.99■■■■□ 3.19
SH3GL3-202ENST00000427482 NCBP3Q53F19 620 aaKnown RBP34.99■■■■□ 3.19
SH3GL3-202ENST00000427482 PIK3C2AO00443 1686 aa34.98■■■■□ 3.19
SH3GL3-202ENST00000427482 WWC1Q8IX03 1113 aa34.97■■■■□ 3.19
SH3GL3-202ENST00000427482 PPM1GO15355 546 aaPredicted RBP34.97■■■■□ 3.19
SH3GL3-202ENST00000427482 PHF23Q9BUL5 403 aaPredicted RBP34.97■■■■□ 3.19
SH3GL3-202ENST00000427482 PLEKHF1Q96S99 279 aa34.96■■■■□ 3.19
SH3GL3-202ENST00000427482 RRP1P56182 461 aaKnown RBP34.95■■■■□ 3.19
SH3GL3-202ENST00000427482 USP31Q70CQ4 1352 aa34.95■■■■□ 3.19
SH3GL3-202ENST00000427482 E9PSI1 815 aa34.94■■■■□ 3.18
SH3GL3-202ENST00000427482 CCDC27Q2M243 656 aa34.94■■■■□ 3.18
SH3GL3-202ENST00000427482 RBM33Q96EV2 1170 aaKnown RBP34.94■■■■□ 3.18
SH3GL3-202ENST00000427482 USP54Q70EL1 1684 aa34.93■■■■□ 3.18
SH3GL3-202ENST00000427482 RRP7AQ9Y3A4 280 aaKnown RBP34.93■■■■□ 3.18
SH3GL3-202ENST00000427482 SPINK5Q9NQ38 1064 aaPredicted RBP34.92■■■■□ 3.18
SH3GL3-202ENST00000427482 PPP4R2Q9NY27 417 aa34.92■■■■□ 3.18
SH3GL3-202ENST00000427482 LRRC7Q96NW7 1537 aa34.92■■■■□ 3.18
SH3GL3-202ENST00000427482 RRS1Q15050 365 aaKnown RBP34.91■■■■□ 3.18
SH3GL3-202ENST00000427482 DMRT2Q9Y5R5 561 aa34.91■■■■□ 3.18
SH3GL3-202ENST00000427482 MARF1Q9Y4F3 1742 aaKnown RBP34.9■■■■□ 3.18
SH3GL3-202ENST00000427482 NEUROD2Q15784 382 aa34.9■■■■□ 3.18
SH3GL3-202ENST00000427482 PNNQ9H307 717 aaKnown RBP34.89■■■■□ 3.18
SH3GL3-202ENST00000427482 PEAK1Q9H792 1746 aa34.88■■■■□ 3.17
SH3GL3-202ENST00000427482 IL13P35225 146 aa34.88■■■■□ 3.17
SH3GL3-202ENST00000427482 PELP1Q8IZL8 1130 aaKnown RBP34.87■■■■□ 3.17
SH3GL3-202ENST00000427482 MAPK8IP3Q9UPT6 1336 aa34.86■■■■□ 3.17
SH3GL3-202ENST00000427482 FCHSD2O94868 740 aa34.86■■■■□ 3.17
SH3GL3-202ENST00000427482 WDR63Q8IWG1 891 aa34.86■■■■□ 3.17
SH3GL3-202ENST00000427482 PHF8Q9UPP1 1060 aa34.86■■■■□ 3.17
SH3GL3-202ENST00000427482 STRCP1A6NGW2 1772 aa34.86■■■■□ 3.17
SH3GL3-202ENST00000427482 KDM4FA0A1W2PPD8 638 aa34.85■■■■□ 3.17
SH3GL3-202ENST00000427482 C14orf37Q86TY3 774 aa34.83■■■■□ 3.17
SH3GL3-202ENST00000427482 RSPH6AQ9H0K4 717 aa34.83■■■■□ 3.17
SH3GL3-202ENST00000427482 TMPOP42166 694 aaKnown RBP34.82■■■■□ 3.16
SH3GL3-202ENST00000427482 PROSER2Q86WR7 435 aaPredicted RBP34.81■■■■□ 3.16
SH3GL3-202ENST00000427482 LMTK3Q96Q04 1460 aa34.78■■■■□ 3.16
SH3GL3-202ENST00000427482 HSPA2P54652 639 aa34.78■■■■□ 3.16
SH3GL3-202ENST00000427482 PRKAR2BP31323 418 aa34.76■■■■□ 3.16
SH3GL3-202ENST00000427482 RGPD1P0DJD0 1748 aa34.75■■■■□ 3.15
SH3GL3-202ENST00000427482 ESCO1Q5FWF5 840 aa34.74■■■■□ 3.15
SH3GL3-202ENST00000427482 STRCQ7RTU9 1775 aa34.74■■■■□ 3.15
SH3GL3-202ENST00000427482 NLRP6P59044 892 aa34.73■■■■□ 3.15
SH3GL3-202ENST00000427482 TRIM35Q9UPQ4 493 aa34.73■■■■□ 3.15
SH3GL3-202ENST00000427482 HMOX1P09601 288 aa34.72■■■■□ 3.15
SH3GL3-202ENST00000427482 MAP3K19Q56UN5 1328 aa34.72■■■■□ 3.15
SH3GL3-202ENST00000427482 KIF1AQ12756 1690 aa34.72■■■■□ 3.15
SH3GL3-202ENST00000427482 SBNO1A3KN83 1393 aa34.71■■■■□ 3.15
SH3GL3-202ENST00000427482 EIF4A2Q14240 407 aaKnown RBP34.71■■■■□ 3.15
SH3GL3-202ENST00000427482 NEFMP07197 916 aa34.7■■■■□ 3.15
SH3GL3-202ENST00000427482 SOX12O15370 315 aa34.69■■■■□ 3.14
SH3GL3-202ENST00000427482 C19orf44Q9H6X5 657 aa34.69■■■■□ 3.14
SH3GL3-202ENST00000427482 NCOA3Q9Y6Q9 1424 aa34.69■■■■□ 3.14
SH3GL3-202ENST00000427482 RIPK4P57078 832 aa34.69■■■■□ 3.14
SH3GL3-202ENST00000427482 ABTB2Q8N961 1025 aa34.69■■■■□ 3.14
SH3GL3-202ENST00000427482 FLT4P35916 1363 aa34.68■■■■□ 3.14
SH3GL3-202ENST00000427482 PLIN1O60240 522 aa34.68■■■■□ 3.14
SH3GL3-202ENST00000427482 PAK3O75914 559 aaPredicted RBP34.68■■■■□ 3.14
SH3GL3-202ENST00000427482 DLG5Q8TDM6 1919 aa34.68■■■■□ 3.14
SH3GL3-202ENST00000427482 B4GALNT3Q6L9W6 998 aa34.67■■■■□ 3.14
SH3GL3-202ENST00000427482 MYH16Q9H6N6 1097 aa34.67■■■■□ 3.14
SH3GL3-202ENST00000427482 C1orf167Q5SNV9 1468 aa34.66■■■■□ 3.14
SH3GL3-202ENST00000427482 HSP90AB2PQ58FF8 381 aa34.66■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms