RNA–Protein interactions for RNA: ENST00000424493.1

AC024560.1-201, humanhuman

TSL 3 BASIC

Gene AC024560.1, Length 1,471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC024560.1-201ENST00000424493 U2AF1Q01081 240 aaKnown RBP eCLIP17.36■□□□□ 0.37
AC024560.1-201ENST00000424493 CCDC61Q9Y6R9 512 aa17.36■□□□□ 0.37
AC024560.1-201ENST00000424493 SPINK5Q9NQ38 1064 aaPredicted RBP17.35■□□□□ 0.37
AC024560.1-201ENST00000424493 AKAP12Q02952 1782 aa17.34■□□□□ 0.37
AC024560.1-201ENST00000424493 PLIN1O60240 522 aa17.34■□□□□ 0.37
AC024560.1-201ENST00000424493 ITSN1Q15811 1721 aa17.34■□□□□ 0.37
AC024560.1-201ENST00000424493 THEMISQ8N1K5 641 aaPredicted RBP17.34■□□□□ 0.37
AC024560.1-201ENST00000424493 CRBNQ96SW2 442 aa17.34■□□□□ 0.37
AC024560.1-201ENST00000424493 TBX22Q9Y458 520 aa17.33■□□□□ 0.37
AC024560.1-201ENST00000424493 TOPAZ1Q8N9V7 1692 aa17.32■□□□□ 0.36
AC024560.1-201ENST00000424493 PTCH1Q13635 1447 aa17.32■□□□□ 0.36
AC024560.1-201ENST00000424493 PTPRUQ92729 1446 aa17.32■□□□□ 0.36
AC024560.1-201ENST00000424493 PNNQ9H307 717 aaKnown RBP17.32■□□□□ 0.36
AC024560.1-201ENST00000424493 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
AC024560.1-201ENST00000424493 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.32■□□□□ 0.36
AC024560.1-201ENST00000424493 DIAPH1O60610 1272 aaKnown RBP17.31■□□□□ 0.36
AC024560.1-201ENST00000424493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.31■□□□□ 0.36
AC024560.1-201ENST00000424493 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
AC024560.1-201ENST00000424493 AATKQ6ZMQ8 1374 aa17.31■□□□□ 0.36
AC024560.1-201ENST00000424493 U2SURPO15042 1029 aaKnown RBP17.3■□□□□ 0.36
AC024560.1-201ENST00000424493 PLEKHF1Q96S99 279 aa17.3■□□□□ 0.36
AC024560.1-201ENST00000424493 RRP7AQ9Y3A4 280 aaKnown RBP17.3■□□□□ 0.36
AC024560.1-201ENST00000424493 PRR36Q9H6K5 1346 aa17.29■□□□□ 0.36
AC024560.1-201ENST00000424493 CEP170BQ9Y4F5 1589 aaPredicted RBP17.29■□□□□ 0.36
AC024560.1-201ENST00000424493 MAPK8IP3Q9UPT6 1336 aa17.28■□□□□ 0.36
AC024560.1-201ENST00000424493 CDK12Q9NYV4 1490 aaPredicted RBP17.28■□□□□ 0.36
AC024560.1-201ENST00000424493 NEUROD2Q15784 382 aa17.28■□□□□ 0.36
AC024560.1-201ENST00000424493 POLKQ9UBT6 870 aa17.28■□□□□ 0.36
AC024560.1-201ENST00000424493 NRKQ7Z2Y5 1582 aa17.28■□□□□ 0.36
AC024560.1-201ENST00000424493 C20orf194Q5TEA3 1177 aa17.27■□□□□ 0.36
AC024560.1-201ENST00000424493 SLC26A8Q96RN1 970 aa17.27■□□□□ 0.36
AC024560.1-201ENST00000424493 MYH16Q9H6N6 1097 aa17.27■□□□□ 0.36
AC024560.1-201ENST00000424493 XRN1Q8IZH2 1706 aaKnown RBP17.26■□□□□ 0.35
AC024560.1-201ENST00000424493 PLEKHG3A1L390 1219 aa17.26■□□□□ 0.35
AC024560.1-201ENST00000424493 NME9Q86XW9 330 aa17.26■□□□□ 0.35
AC024560.1-201ENST00000424493 COG3Q96JB2 828 aa17.26■□□□□ 0.35
AC024560.1-201ENST00000424493 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
AC024560.1-201ENST00000424493 TMPOP42166 694 aaKnown RBP17.25■□□□□ 0.35
AC024560.1-201ENST00000424493 AMOTL2Q9Y2J4 779 aa17.25■□□□□ 0.35
AC024560.1-201ENST00000424493 RIMS1Q86UR5 1692 aaKnown RBP17.25■□□□□ 0.35
AC024560.1-201ENST00000424493 FCHSD2O94868 740 aa17.24■□□□□ 0.35
AC024560.1-201ENST00000424493 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
AC024560.1-201ENST00000424493 IL16Q14005 1332 aa17.24■□□□□ 0.35
AC024560.1-201ENST00000424493 LRRC7Q96NW7 1537 aa17.24■□□□□ 0.35
AC024560.1-201ENST00000424493 NCKAP5LQ9HCH0 1330 aa17.23■□□□□ 0.35
AC024560.1-201ENST00000424493 FANCIQ9NVI1 1328 aa17.23■□□□□ 0.35
AC024560.1-201ENST00000424493 ZNF142P52746 1687 aaPredicted RBP17.23■□□□□ 0.35
AC024560.1-201ENST00000424493 CT47B1P0C2W7 299 aaPredicted RBP17.23■□□□□ 0.35
AC024560.1-201ENST00000424493 BCAR3O75815 825 aa17.22■□□□□ 0.35
AC024560.1-201ENST00000424493 PDE3AQ14432 1141 aa17.22■□□□□ 0.35
AC024560.1-201ENST00000424493 USP6P35125 1406 aa17.22■□□□□ 0.35
AC024560.1-201ENST00000424493 MAP2P11137 1827 aaKnown RBP17.21■□□□□ 0.35
AC024560.1-201ENST00000424493 TCERG1O14776 1098 aaKnown RBP17.21■□□□□ 0.35
AC024560.1-201ENST00000424493 RSPH6AQ9H0K4 717 aa17.21■□□□□ 0.35
AC024560.1-201ENST00000424493 TTC21BQ7Z4L5 1316 aa17.21■□□□□ 0.35
AC024560.1-201ENST00000424493 ADAMTSL3P82987 1691 aa17.21■□□□□ 0.34
AC024560.1-201ENST00000424493 NEFMP07197 916 aa17.2■□□□□ 0.34
AC024560.1-201ENST00000424493 RARSP54136 660 aaKnown RBP17.2■□□□□ 0.34
AC024560.1-201ENST00000424493 TRIM35Q9UPQ4 493 aa17.2■□□□□ 0.34
AC024560.1-201ENST00000424493 ACEP12821 1306 aa17.2■□□□□ 0.34
AC024560.1-201ENST00000424493 OVOS2A0A0J9YW53 1432 aa17.2■□□□□ 0.34
AC024560.1-201ENST00000424493 OVOS2Q6IE36 1432 aa17.2■□□□□ 0.34
AC024560.1-201ENST00000424493 ANKARQ7Z5J8 1434 aa17.19■□□□□ 0.34
AC024560.1-201ENST00000424493 ZRANB1Q9UGI0 708 aa17.19■□□□□ 0.34
AC024560.1-201ENST00000424493 EMILIN1Q9Y6C2 1016 aa17.19■□□□□ 0.34
AC024560.1-201ENST00000424493 PPM1GO15355 546 aaPredicted RBP17.18■□□□□ 0.34
AC024560.1-201ENST00000424493 IL13P35225 146 aa17.18■□□□□ 0.34
AC024560.1-201ENST00000424493 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
AC024560.1-201ENST00000424493 SSH2Q76I76 1423 aa17.18■□□□□ 0.34
AC024560.1-201ENST00000424493 TTC21AQ8NDW8 1320 aa17.18■□□□□ 0.34
AC024560.1-201ENST00000424493 KDM2BQ8NHM5 1336 aa17.18■□□□□ 0.34
AC024560.1-201ENST00000424493 MS4A1P11836 297 aa17.18■□□□□ 0.34
AC024560.1-201ENST00000424493 CANXP27824 592 aaKnown RBP17.18■□□□□ 0.34
AC024560.1-201ENST00000424493 NALCNQ8IZF0 1738 aa17.17■□□□□ 0.34
AC024560.1-201ENST00000424493 PRKAR2BP31323 418 aa17.17■□□□□ 0.34
AC024560.1-201ENST00000424493 RIPK4P57078 832 aa17.17■□□□□ 0.34
AC024560.1-201ENST00000424493 USP31Q70CQ4 1352 aa17.16■□□□□ 0.34
AC024560.1-201ENST00000424493 FBLN1P23142 703 aa17.16■□□□□ 0.34
AC024560.1-201ENST00000424493 AAMPQ13685 434 aa17.15■□□□□ 0.34
AC024560.1-201ENST00000424493 NFE2L2Q16236 605 aa17.14■□□□□ 0.33
AC024560.1-201ENST00000424493 ANKLE2Q86XL3 938 aa17.14■□□□□ 0.33
AC024560.1-201ENST00000424493 FMN2Q9NZ56 1722 aa17.14■□□□□ 0.33
AC024560.1-201ENST00000424493 CALD1Q05682 793 aaKnown RBP17.13■□□□□ 0.33
AC024560.1-201ENST00000424493 RRS1Q15050 365 aaKnown RBP17.12■□□□□ 0.33
AC024560.1-201ENST00000424493 NUTM2FA1L443 756 aa17.12■□□□□ 0.33
AC024560.1-201ENST00000424493 KCNA6P17658 529 aa17.12■□□□□ 0.33
AC024560.1-201ENST00000424493 LMOD3Q0VAK6 560 aa17.11■□□□□ 0.33
AC024560.1-201ENST00000424493 TSR2Q969E8 191 aaKnown RBP17.11■□□□□ 0.33
AC024560.1-201ENST00000424493 HMOX1P09601 288 aa17.1■□□□□ 0.33
AC024560.1-201ENST00000424493 EXOSC9Q06265 439 aaKnown RBP17.1■□□□□ 0.33
AC024560.1-201ENST00000424493 FRAT1Q92837 279 aaPredicted RBP17.1■□□□□ 0.33
AC024560.1-201ENST00000424493 CHD2O14647 1828 aaKnown RBP17.1■□□□□ 0.33
AC024560.1-201ENST00000424493 NGDNQ8NEJ9 315 aaKnown RBP17.09■□□□□ 0.33
AC024560.1-201ENST00000424493 PANK1Q8TE04 598 aa17.09■□□□□ 0.33
AC024560.1-201ENST00000424493 CLUAP1Q96AJ1 413 aa17.08■□□□□ 0.32
AC024560.1-201ENST00000424493 USP54Q70EL1 1684 aa17.07■□□□□ 0.32
AC024560.1-201ENST00000424493 ZKSCAN2Q63HK3 967 aa17.07■□□□□ 0.32
AC024560.1-201ENST00000424493 PMFBP1Q8TBY8 1022 aa17.07■□□□□ 0.32
AC024560.1-201ENST00000424493 PHACTR3Q96KR7 559 aa17.07■□□□□ 0.32
AC024560.1-201ENST00000424493 COG6Q9Y2V7 657 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 600.5 ms