RNA–Protein interactions for RNA: ENST00000421832.2

CTU1-201, Transcript of cytosolic thiouridylase subunit 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTU1, Length 2,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU1-201ENST00000421832 ANKRD26Q9UPS8 1709 aa32.82■■■□□ 2.84
CTU1-201ENST00000421832 PPP2R1AP30153 589 aa32.81■■■□□ 2.84
CTU1-201ENST00000421832 USP6P35125 1406 aa32.81■■■□□ 2.84
CTU1-201ENST00000421832 NGDNQ8NEJ9 315 aaKnown RBP32.81■■■□□ 2.84
CTU1-201ENST00000421832 NSD2O96028 1365 aa32.8■■■□□ 2.84
CTU1-201ENST00000421832 MORC1Q86VD1 984 aa32.79■■■□□ 2.84
CTU1-201ENST00000421832 NLRP13Q86W25 1043 aa32.79■■■□□ 2.84
CTU1-201ENST00000421832 DCCP43146 1447 aa32.79■■■□□ 2.84
CTU1-201ENST00000421832 ESCO1Q5FWF5 840 aa32.79■■■□□ 2.84
CTU1-201ENST00000421832 PHF8Q9UPP1 1060 aa32.79■■■□□ 2.84
CTU1-201ENST00000421832 ORAI2Q96SN7 254 aa32.78■■■□□ 2.84
CTU1-201ENST00000421832 TNNT2P45379 298 aaPredicted RBP32.78■■■□□ 2.84
CTU1-201ENST00000421832 C1orf167Q5SNV9 1468 aa32.77■■■□□ 2.84
CTU1-201ENST00000421832 ATF3P18847 181 aa32.77■■■□□ 2.84
CTU1-201ENST00000421832 NME9Q86XW9 330 aa32.77■■■□□ 2.84
CTU1-201ENST00000421832 BRD4O60885 1362 aaPredicted RBP32.77■■■□□ 2.84
CTU1-201ENST00000421832 MSH6P52701 1360 aa32.77■■■□□ 2.84
CTU1-201ENST00000421832 MST1RQ04912 1400 aa32.77■■■□□ 2.84
CTU1-201ENST00000421832 SSH2Q76I76 1423 aa32.76■■■□□ 2.83
CTU1-201ENST00000421832 ZRANB1Q9UGI0 708 aa32.75■■■□□ 2.83
CTU1-201ENST00000421832 TTC21BQ7Z4L5 1316 aa32.74■■■□□ 2.83
CTU1-201ENST00000421832 AEBP2Q6ZN18 517 aaPredicted RBP32.73■■■□□ 2.83
CTU1-201ENST00000421832 CADPS2Q86UW7 1296 aa32.71■■■□□ 2.83
CTU1-201ENST00000421832 LTBP4Q8N2S1 1624 aa32.68■■■□□ 2.82
CTU1-201ENST00000421832 MSH5O43196 834 aa32.68■■■□□ 2.82
CTU1-201ENST00000421832 FAM9BQ8IZU0 186 aa32.68■■■□□ 2.82
CTU1-201ENST00000421832 PNISRQ8TF01 805 aaKnown RBP32.65■■■□□ 2.82
CTU1-201ENST00000421832 PIK3C2AO00443 1686 aa32.65■■■□□ 2.82
CTU1-201ENST00000421832 KIF1AQ12756 1690 aa32.64■■■□□ 2.82
CTU1-201ENST00000421832 FOXO3O43524 673 aa32.64■■■□□ 2.82
CTU1-201ENST00000421832 FBLN1P23142 703 aa32.63■■■□□ 2.81
CTU1-201ENST00000421832 TTC21AQ8NDW8 1320 aa32.61■■■□□ 2.81
CTU1-201ENST00000421832 XPCQ01831 940 aaPredicted RBP32.61■■■□□ 2.81
CTU1-201ENST00000421832 PSME1Q06323 249 aa32.6■■■□□ 2.81
CTU1-201ENST00000421832 COG3Q96JB2 828 aa32.6■■■□□ 2.81
CTU1-201ENST00000421832 OVOS2A0A0J9YW53 1432 aa32.6■■■□□ 2.81
CTU1-201ENST00000421832 OVOS2Q6IE36 1432 aa32.6■■■□□ 2.81
CTU1-201ENST00000421832 MTHFSP49914 203 aa32.58■■■□□ 2.81
CTU1-201ENST00000421832 MAP2P11137 1827 aaKnown RBP32.57■■■□□ 2.81
CTU1-201ENST00000421832 PAK3O75914 559 aaPredicted RBP32.57■■■□□ 2.8
CTU1-201ENST00000421832 DDX17Q92841 729 aaKnown RBP32.57■■■□□ 2.8
CTU1-201ENST00000421832 MARF1Q9Y4F3 1742 aaKnown RBP32.57■■■□□ 2.8
CTU1-201ENST00000421832 SLAIN2Q9P270 581 aa32.55■■■□□ 2.8
CTU1-201ENST00000421832 TRPM3Q9HCF6 1732 aaPredicted RBP32.55■■■□□ 2.8
CTU1-201ENST00000421832 NUTM2GQ5VZR2 741 aa32.54■■■□□ 2.8
CTU1-201ENST00000421832 BRINP3Q76B58 766 aa32.52■■■□□ 2.8
CTU1-201ENST00000421832 USP31Q70CQ4 1352 aa32.51■■■□□ 2.8
CTU1-201ENST00000421832 ABTB2Q8N961 1025 aa32.51■■■□□ 2.8
CTU1-201ENST00000421832 ERICH6BQ5W0A0 696 aa32.5■■■□□ 2.79
CTU1-201ENST00000421832 KRT28Q7Z3Y7 464 aa32.5■■■□□ 2.79
CTU1-201ENST00000421832 USP54Q70EL1 1684 aa32.49■■■□□ 2.79
CTU1-201ENST00000421832 NLRP6P59044 892 aa32.49■■■□□ 2.79
CTU1-201ENST00000421832 POLKQ9UBT6 870 aa32.49■■■□□ 2.79
CTU1-201ENST00000421832 ERICH6Q7L0X2 663 aa32.49■■■□□ 2.79
CTU1-201ENST00000421832 SHPRHQ149N8 1683 aa32.48■■■□□ 2.79
CTU1-201ENST00000421832 EMILIN1Q9Y6C2 1016 aa32.47■■■□□ 2.79
CTU1-201ENST00000421832 AATKQ6ZMQ8 1374 aa32.47■■■□□ 2.79
CTU1-201ENST00000421832 RRS1Q15050 365 aaKnown RBP32.46■■■□□ 2.79
CTU1-201ENST00000421832 SOX12O15370 315 aa32.46■■■□□ 2.79
CTU1-201ENST00000421832 COL3A1P02461 1466 aaPredicted RBP32.43■■■□□ 2.78
CTU1-201ENST00000421832 PXDNQ92626 1479 aa32.43■■■□□ 2.78
CTU1-201ENST00000421832 NPHP3Q7Z494 1330 aa32.43■■■□□ 2.78
CTU1-201ENST00000421832 PPM1GO15355 546 aaPredicted RBP32.42■■■□□ 2.78
CTU1-201ENST00000421832 HNRNPUQ00839 825 aaKnown RBP eCLIP32.42■■■□□ 2.78
CTU1-201ENST00000421832 ADAMTS8Q9UP79 889 aa32.42■■■□□ 2.78
CTU1-201ENST00000421832 ALS2Q96Q42 1657 aa32.42■■■□□ 2.78
CTU1-201ENST00000421832 SMG6Q86US8 1419 aaKnown RBP32.41■■■□□ 2.78
CTU1-201ENST00000421832 SENP3-EIF4A1A0A087X0R7 540 aa32.4■■■□□ 2.78
CTU1-201ENST00000421832 CFAP53Q96M91 514 aa32.4■■■□□ 2.78
CTU1-201ENST00000421832 LMOD2Q6P5Q4 547 aa32.39■■■□□ 2.78
CTU1-201ENST00000421832 PNPLA6Q8IY17 1366 aa32.39■■■□□ 2.78
CTU1-201ENST00000421832 WDR43Q15061 677 aaKnown RBP eCLIP32.39■■■□□ 2.78
CTU1-201ENST00000421832 PEAK1Q9H792 1746 aa32.38■■■□□ 2.77
CTU1-201ENST00000421832 PLEKHG5O94827 1062 aa32.35■■■□□ 2.77
CTU1-201ENST00000421832 CDK12Q9NYV4 1490 aaPredicted RBP32.35■■■□□ 2.77
CTU1-201ENST00000421832 SBNO1A3KN83 1393 aa32.34■■■□□ 2.77
CTU1-201ENST00000421832 NHSL1Q5SYE7 1610 aa32.34■■■□□ 2.77
CTU1-201ENST00000421832 ROBO1Q9Y6N7 1651 aa32.33■■■□□ 2.77
CTU1-201ENST00000421832 INSRP06213 1382 aa32.33■■■□□ 2.77
CTU1-201ENST00000421832 BLMP54132 1417 aaPredicted RBP32.33■■■□□ 2.77
CTU1-201ENST00000421832 MAP3K19Q56UN5 1328 aa32.32■■■□□ 2.77
CTU1-201ENST00000421832 TNS3Q68CZ2 1445 aa32.32■■■□□ 2.76
CTU1-201ENST00000421832 NFAT5O94916 1531 aa32.31■■■□□ 2.76
CTU1-201ENST00000421832 SOS2Q07890 1332 aaPredicted RBP32.3■■■□□ 2.76
CTU1-201ENST00000421832 SPATA31A3Q5VYP0 1347 aa32.29■■■□□ 2.76
CTU1-201ENST00000421832 SLIT3O75094 1523 aa32.29■■■□□ 2.76
CTU1-201ENST00000421832 LTN1O94822 1766 aa32.29■■■□□ 2.76
CTU1-201ENST00000421832 MED1Q15648 1581 aaPredicted RBP32.28■■■□□ 2.76
CTU1-201ENST00000421832 DIAPH1O60610 1272 aaKnown RBP32.28■■■□□ 2.76
CTU1-201ENST00000421832 USP19O94966 1318 aa32.28■■■□□ 2.76
CTU1-201ENST00000421832 CCDC146Q8IYE0 955 aa32.26■■■□□ 2.75
CTU1-201ENST00000421832 HSP90AB2PQ58FF8 381 aa32.25■■■□□ 2.75
CTU1-201ENST00000421832 U2SURPO15042 1029 aaKnown RBP32.24■■■□□ 2.75
CTU1-201ENST00000421832 GCP02774 474 aa32.23■■■□□ 2.75
CTU1-201ENST00000421832 U2AF1L5P0DN76 240 aaPredicted RBP32.23■■■□□ 2.75
CTU1-201ENST00000421832 U2AF1Q01081 240 aaKnown RBP eCLIP32.23■■■□□ 2.75
CTU1-201ENST00000421832 CRYBG1Q9Y4K1 1723 aa32.22■■■□□ 2.75
CTU1-201ENST00000421832 IL13P35225 146 aa32.22■■■□□ 2.75
CTU1-201ENST00000421832 PHRF1Q9P1Y6 1649 aaKnown RBP32.21■■■□□ 2.75
CTU1-201ENST00000421832 KCNH5Q8NCM2 988 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms